Ggra8381.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8381.t1
Unique NameGgra8381.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length677
Homology
BLAST of Ggra8381.t1 vs. uniprot
Match: A0A2V3IGB2 (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGB2_9FLOR)

HSP 1 Score: 934 bits (2414), Expect = 0.000e+0
Identity = 455/602 (75.58%), Postives = 525/602 (87.21%), Query Frame = 0
Query:   75 PLVPLESPTQRFYDFSNHTVEAVRITHCQVVSDQMADFIVDSVRSKRSTLAELATLLSICDQTRTSAGDTGWIFLPAAMKPTISNQSPTNHSTYISDELLEKAIQSRPGSLQRTKLSYGWEIFTVTDVRHSVNATFLGATREKGFSVNPNMRRTSKKKPIIIPKSFFIQTFGCQMNDSDSERMAAELEDEGYHQVDDPNKSAFYLLNTCALRDHAQQKVYSYLGPHAQRKWDAPQDVTLIVTGCVAQQEGEALLSRVPEIDIVMGPQYANRLADVINLYRMSKTQVVAVDPIHIHEDISKPKRSSKLTAWVNVIYGCNERCTYCVVPNTRGLEQSRPMSSIRKEMEALAAEGYREVVLLGQNVDAYGRDLSPKVTFSELLRYVHDVDGIERIRFTTGHPRYISGNLIDTVYELPKVMEHFHIPPQSGDSSVLKAMKRGYNRERYIQIVRRIRDKMPDASVCADMIVGFPGETEEAFQNSVTLADEIVFDSNMVRAYSARPNTSAASLPGQVSEQVKMERLSIMNKKMKHQAELRSRRYLGRCVEVLVDSLNPKRANEVSGRERTNRVVFCEGGPELIGRIIEVRVQEAYPFSLRGTITQILK 676
            P+  L SP  RFYDFSNH V A+R+THC+V+S+ MA FI ++V+S+R+ L+++ATLLS+CDQTR SAGDTGWI        +    SP      + DE L+ A+++RP +LQ  + SYGWE++ V+D+R SV  T LGATREKG++VNPNMRRTS+K P IIP SFFIQTFGCQMN SDSER+AA+LE +GYHQ+DDPNKSA Y+LNTCALRDHA+QKVYSYLGPHAQRKWDAPQ V LIV GCVAQQEG+ALLSRVPEIDIVMGPQYANR+ DV+NLY  SK QVVAVDPIHIHEDISKPKRSS +TAWVN+IYGC ERCTYCVVPNTRGLEQSRPMSSIR+E+EALAAEGYREVVLLGQNVDAYGRDL PK T SELLRY+HDVDGIERIRFTTGHPRYIS NLI+TVYELPKVMEHFH+PPQSGDS VLKAMKRGY+RERYI I RRIR+KMPDA++CAD IVGFPGET++AFQN+V+LADE+VFD+NMVRAYSARPNT AAS P QV+E+VKMERL+IMNKKM+ QAE RSRRYLGR VEVLV+ +NPKR+NEVSGRERTNR+VFCEGG ELIG++IEV V EAYPFSLRG + +++K
Sbjct:   67 PVRRLPSPPPRFYDFSNHHVHAIRLTHCRVLSEHMASFIHNAVKSRRAMLSQMATLLSVCDQTRLSAGDTGWISTAPHHSKSAQPSSP------VPDEFLQVALRARPATLQFEQFSYGWEVYIVSDIRQSVQPTKLGATREKGYTVNPNMRRTSQKPPHIIPHSFFIQTFGCQMNASDSERIAAQLESQGYHQIDDPNKSAIYMLNTCALRDHAEQKVYSYLGPHAQRKWDAPQQVMLIVAGCVAQQEGDALLSRVPEIDIVMGPQYANRITDVLNLYHTSKAQVVAVDPIHIHEDISKPKRSSSITAWVNIIYGCLERCTYCVVPNTRGLEQSRPMSSIRREIEALAAEGYREVVLLGQNVDAYGRDLYPKATLSELLRYIHDVDGIERIRFTTGHPRYISENLINTVYELPKVMEHFHVPPQSGDSQVLKAMKRGYSRERYINIARRIREKMPDAAICADTIVGFPGETDDAFQNTVSLADEVVFDANMVRAYSARPNTIAASRPDQVNEEVKMERLAIMNKKMREQAEQRSRRYLGRTVEVLVEGMNPKRSNEVSGRERTNRIVFCEGGTELIGKLIEVTVLEAYPFSLRGILRRVIK 662          
BLAST of Ggra8381.t1 vs. uniprot
Match: R7QN23 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QN23_CHOCR)

HSP 1 Score: 754 bits (1948), Expect = 3.210e-267
Identity = 374/563 (66.43%), Postives = 447/563 (79.40%), Query Frame = 0
Query:  117 VRSKRSTLAELATLLSICDQTRTSAGDTGWIFLPA-------AMKPTISNQSPTNHSTYISDELLEKAIQSRPGSLQRTKLSYGWEIFTVTDVRHSVNATFLGATREKGFSVNPNMRRTSKKKPIIIPKSFFIQTFGCQMNDSDSERMAAELEDEGYHQVDDPNKSAFYLLNTCALRDHAQQKVYSYLGPHAQRKWDAPQDVTLIVTGCVAQQEGEALLSRVPEIDIVMGPQYANRLADVINLYRMSKTQVVAVDPIHIHEDISKPKRSSKLTAWVNVIYGCNERCTYCVVPNTRGLEQSRPMSSIRKEMEALAAEGYREVVLLGQNVDAYGRDLSPKVTFSELLRYVHDVDGIERIRFTTGHPRYISGNLIDTVYELPKVMEHFHIPPQSGDSSVLKAMKRGYNRERYIQIVRRIRDKMPDASVCADMIVGFPGETEEAFQNSVTLADEIVFDSNMVRAYSARPNTSAASLPGQVSEQVKMERLSIMNKKMKHQAELRSRRYLGRCVEVLVDSLNPKRANEVSGRERTNRVVFCEGGPE-LIGRIIEVRVQEAYPFSLRGTI 671
            VR+K S+LAEL++LLS+CD +++ +GDTGW+ +P        A+     +      S  +  ELL  A+ +RPG+LQ  +LSYGWE+F V DVRH+V  T  GA R  GF V PNMRRTS KKP+I   S++IQTFGCQMN SDSERMAAELE +GYH  DDP KSA YLLNTCALRDHA+QKVYSYLGPHAQRKWDAP +VTL+V GCVAQQEG+ LLSRVPE+DIVMGPQYANR+ +V++ +  +  Q+VAVDPIHI ED SKP RSSK+TAWVN+IYGC E+C+YCVVPNTRGLEQSR M SIR E++ LA +GYREVVLLGQNVDAYGRDL PK TFS+LLR++HDVDGIER+RFTTGHPRYIS NLI TV ELPKVMEHFH+PPQSGD+ VLK M RGY RERY+ I RR+R +MPDAS+CAD IVGFPGE+EEAF+N+V +  ++VFDSNMVRAYSARPNT+A     QV E+VK  RL++MN+ M+ QAE RS+RYLGR VEVLV+ +N K   EV GRER+NRVVF EG  E  +G+I  V V EA+ FSLRG +
Sbjct:    6 VRAKESSLAELSSLLSVCDTSKSKSGDTGWVQVPNPNMTVRNALADEAQHLDDLVKSVAMHPELLHAAMAARPGALQTVQLSYGWEVFVVEDVRHAVVPTLRGARRGPGFPVTPNMRRTSPKKPVIDDMSYYIQTFGCQMNVSDSERMAAELERKGYHATDDPKKSALYLLNTCALRDHAEQKVYSYLGPHAQRKWDAPSEVTLVVAGCVAQQEGDKLLSRVPEVDIVMGPQYANRIGEVLDDFAENMMQIVAVDPIHIQEDFSKPVRSSKITAWVNIIYGCLEKCSYCVVPNTRGLEQSRTMESIRAELQGLARDGYREVVLLGQNVDAYGRDLYPKRTFSDLLRFIHDVDGIERVRFTTGHPRYISENLITTVAELPKVMEHFHVPPQSGDNGVLKEMGRGYTRERYMDIARRVRKRMPDASICADTIVGFPGESEEAFENTVDMVKQVVFDSNMVRAYSARPNTTAGLREDQVEEEVKARRLAVMNRLMREQAEKRSQRYLGRRVEVLVEGVNEKVDGEVMGRERSNRVVFFEGAAEEYVGKIAVVEVDEAFAFSLRGRV 568          
BLAST of Ggra8381.t1 vs. uniprot
Match: R7QB29 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QB29_CHOCR)

HSP 1 Score: 590 bits (1522), Expect = 1.960e-201
Identity = 306/603 (50.75%), Postives = 407/603 (67.50%), Query Frame = 0
Query:   71 RAAKPLVPLESPTQRFYDFSNHTVEAVRITHCQVVSDQMADFIVDSVRSKRSTLAELATLLSICDQTRTSAGDTGWIFLPAAMKPTISNQSPTNHSTY-ISDELLEKAIQSRPGSLQRTKLSYGWEIFTVTDVRHSVNATFLGATREKGFSVNPNMRRTSKKKPIIIPKSFFIQTFGCQMNDSDSERMAAELEDEGYHQVDDPNKSAFYLLNTCALRDHAQQKVYSYLGPHAQRKWDAPQDVTLIVTGCVAQQEGEALLSRVPEIDIVMGPQYANRLADVINLYRMSKTQVVAVDPIHIHEDISKPKRSSKLTAWVNVIYGCNERCTYCVVPNT-RGLEQSRPMSSIRKEMEALAAEGYREVVLLGQNVDAYGRDLSPKVTFSELLRYVHDVDGIERIRFTTGHPRYISGNLIDTVYELPKVMEHFHIPPQSGDSSVLKAMKRGYNRERYIQIVRRIRDKMPDASVCADMIVGFPGETEEAFQNSVTLADEIVFDSNMVRAYSARPNTSAASLPGQVSEQVKMERLSIMNKKMKHQAELRSRRYLGRCVEVLVDSLNPKRANEVSGRERTNRVVFCEGGPELIGRIIEVRVQEAYPFSLRGTI 671
            RA  P +    P  RFYD S + +EAVRI HC+V ++++A  +   + ++  +LA++A ++S C  ++ S GD GW +   A+        P +   + ++++LL  A+++RP  L++ K   GW +F V +VRH +  T    T  +  +   + + TS +  + + K++ +QT GCQMN SDSERMA EL   GY ++DDP K++  +LNTC +RDHA++KVYSY+G HA RK   PQDVTL V GCVAQQEGE +L R+PE+D+V GPQYANRL D++     ++ QV A DPIHI EDISKPKR S +TAWVNV+YGC E CT+C V N  R +EQSR +SSIR EME +A  G REVVLLGQN+DAYGRD+ PK TF+ELLR VHDVDGI+RIRFTT HPRYIS NL+ T  ELP VM +FHIPPQSG+  VLK MKRGY  + +  +V RIR+  PDA++C DMIVGFPGETEE FQ+S+ L +++ FD     AYS RPNT AA    Q+S+ +K +RL+ MN+ +   A  RS RY+GR   VLV+  + K   EV GR  TNR V   G  EL G+I+ V++ EA PF+L G I
Sbjct:   58 RADIPKIASGLPGNRFYDISPNDIEAVRIRHCRVDTEELAKVVFRKIVAREESLAKMAKMVSTCSASKESGGDLGWWWQDEAI--------PADREQFGVNEQLLGAALRTRPNRLEQVKTEDGWHVFMVEEVRHVIR-TKHERTPSRRKADKKDFKNTSAEALVPVAKTYAMQTLGCQMNRSDSERMAGELARIGYKEIDDPFKASVLVLNTCNIRDHAEKKVYSYIGRHAARKRKYPQDVTLAVAGCVAQQEGERMLRRIPELDLVFGPQYANRLGDLLKDVETNQCQVAATDPIHIQEDISKPKRESTVTAWVNVMYGCGENCTFCTVGNVVRSVEQSRTISSIRAEMEDIARSGIREVVLLGQNIDAYGRDMYPKKTFAELLRNVHDVDGIDRIRFTTSHPRYISRNLVTTCAELPNVMPYFHIPPQSGNDDVLKEMKRGYTVKAFKAVVNRIREATPDAAICGDMIVGFPGETEEQFQDSLKLMEDVKFDVMNTAAYSPRPNTPAAEYSNQISDAMKADRLARMNELVTRHALERSMRYVGRVEHVLVEQESSKTPGEVVGRTPTNRTVRFSGSRELRGKIVPVKIVEALPFTLLGEI 651          
BLAST of Ggra8381.t1 vs. uniprot
Match: A0A2V3J037 (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J037_9FLOR)

HSP 1 Score: 583 bits (1502), Expect = 1.680e-198
Identity = 317/677 (46.82%), Postives = 421/677 (62.19%), Query Frame = 0
Query:    1 MNSKTAFASPLPLLSFLGGLHASLPSEFNCSSCVSHNAIRSDVHRLASIVAVSTPSPANNSPTSSVREAQRAAKPLVPLESPTQRFYDFSNHTVEAVRITHCQVVSDQMADFIVDSVRSKRSTLAELATLLSICDQTRTSAGDTGWIFLPAAMKPTISNQSPTNHSTYISDELLEKAIQSRPGSLQRTKLSYGWEIFTVTDVRHSVN------ATFLGATREKGFSVNPNMRRTSKKKPIIIPKSFFIQTFGCQMNDSDSERMAAELEDEGYHQVDDPNKSAFYLLNTCALRDHAQQKVYSYLGPHAQRKWDAPQDVTLIVTGCVAQQEGEALLSRVPEIDIVMGPQYANRLADVINLYRMSKTQVVAVDPIHIHEDISKPKRSSKLTAWVNVIYGCNERCTYCVVPNT-RGLEQSRPMSSIRKEMEALAAEGYREVVLLGQNVDAYGRDLSPKVTFSELLRYVHDVDGIERIRFTTGHPRYISGNLIDTVYELPKVMEHFHIPPQSGDSSVLKAMKRGYNRERYIQIVRRIRDKMPDASVCADMIVGFPGETEEAFQNSVTLADEIVFDSNMVRAYSARPNTSAASLPGQVSEQVKMERLSIMNKKMKHQAELRSRRYLGRCVEVLVDSLNPKRANEVSGRERTNRVVFCEGG-PELIGRIIEVRVQEAYPFSLRG 669
            M   TAF +     SF   L   LP    CS      + R  +  +A I    TP           RE  R  +P VP      RF++ S   +EA+RI HC++ + ++ D +   +   ++ LA++A  LS C+ ++   GD GW +    +   +           I+D+LL  A++SRP +L+R +  +GW +F V + RH +       A+     R++G  VN       ++ P  +P ++ +QT GCQMN SDSERMA EL   GY +  DP +++  +LNTC +R+HA+ KVYSY+G H  RK   P DVTL V GCVAQQEGE +L R+PE+D+V GPQY NRL D++     +  QV A DP HI EDISKPKR S ++AW+NVIYGC E C++C V N  R +EQSR M SIR E+E  A +GYRE+VLLGQN+DAYGRD+ PK TFS+LL ++HD+DGIERIRFTT HPRYIS NL+D    LP+VM  FHIPPQSGD+ VLKAM+RGY  E Y  +V+RIR  +PDA++C DMIVGFPGETEE FQ S+ L D + FD     AYS RP T AA +  QV + VKM+RL  MN+ +K  A  RS RY+GR   VLV+  NPK A +V GR  TNR V+ +G   EL G+I+ V +++AYPFSL+G
Sbjct:    1 MRLNTAFVAG----SFCTPLETFLPQRNLCSRQTFSESGRKSI--VAVIQQERTP-----------RELNRVPRPGVP----GHRFHNISPDDIEAIRIRHCRLETKELCDQVWKQITRDKARLADVAASLSTCNASKHQGGDLGWWWKEEIVPENVEEFG-------INDQLLAAALRSRPHTLERVQTKHGWHVFIVEEARHVLRTKHERTASRQNPNRKRGVGVN------GEQVPRPLPHTYAVQTLGCQMNRSDSERMAGELNRLGYTETSDPFQASLLILNTCNIREHAESKVYSYVGRHVMRKRMYPNDVTLCVAGCVAQQEGEKMLRRIPELDLVFGPQYVNRLGDLLTDVERNGCQVAATDPTHIQEDISKPKRESSVSAWINVIYGCGENCSFCTVGNVVRSVEQSRSMESIRSEIEEAARDGYREIVLLGQNIDAYGRDMYPKRTFSQLLDFIHDIDGIERIRFTTSHPRYISQNLVDMCATLPRVMPFFHIPPQSGDNDVLKAMRRGYTVEAYEAVVKRIRKSIPDAAICGDMIVGFPGETEEQFQKSLELMDRVKFDVMNTAAYSPRPQTPAALMENQVPDAVKMDRLYRMNEVVKAHALERSLRYIGRTELVLVEHQNPKNARQVVGRTPTNRSVYFDGSIEELRGKIVSVEIEDAYPFSLKG 643          
BLAST of Ggra8381.t1 vs. uniprot
Match: A0A7S0ZI68 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZI68_9RHOD)

HSP 1 Score: 546 bits (1407), Expect = 6.450e-184
Identity = 290/598 (48.49%), Postives = 393/598 (65.72%), Query Frame = 0
Query:   85 RFYDFSNHTVEAVRITHCQVVSDQMADFIVDSVRSKRSTLAELATLLSICDQTRTSAGDTGWIFLPA---AMKPTISNQSPT--NHSTY-ISDELLEKAIQSRPGSLQR--TKLSYGWEIFTVTDVRHSVN-ATFL-GATREKGFSVNPNMRRTSKKKPIIIPKSFFIQTFGCQMNDSDSERMAAELEDEGYHQVDDPNKSAFYLLNTCALRDHAQQKVYSYLGPHAQRKWDAPQDVTLIVTGCVAQQEGEALLSRVPEIDIVMGPQYANRLADVINLYRMSKTQVVAVDPIHIHEDISKPKRSSKLTAWVNVIYGCNERCTYCVVPNTRGLEQSRPMSSIRKEMEALAAEGYREVVLLGQNVDAYGRDLSPKVTFSELLRYVHDVDGIERIRFTTGHPRYISGNLIDTVYELPKVMEHFHIPPQSGDSSVLKAMKRGYNRERYIQIVRRIRDKMPDASVCADMIVGFPGETEEAFQNSVTLADEIVFDSNMVRAYSARPNTSAASLPGQVSEQVKMERLSIMNKKMKHQAELRSRRYLGRCVEVLVDSLNPKRANEVSGRERTNRVVFCEGG-PELIGRIIEVRVQEAYPFSLRGTI 671
            RFY F    +E +  +  Q+ S+ +AD+I+D+++S  S  A LA  LS C+ T+ S G  GWI  P    + + TI + SP    H  + I  +LL+ A Q+RP S+ +  ++ ++ W +F V D  H ++  TF  G+T + G  +                 S+ I+T GCQ N SDSERMA+ LE+ G+H   DP  +   +LNTCA+R+HA+ KVY +LG HA RK      V L+V+GCVAQQEGE LL +VPE+DI+ GPQYANRL +++     +  Q+ A +PIH+ ED+S P R+SK+TAWVNVIYGCNERCTYCVVP+TRGLEQSR M SIR E+   A  G +E+VLLGQN+DAYGRDL+PK TF++LL Y+HDV+GI+RIRF T HPRY+S  LID   +L KV EHFH+P QSG   +L+ M RGY  +RY+QI++ IRDKMP A +  D IVGFP E+EE F++++ L   + FD     AYS RPNT AA +  QV E++K ERL  +N  +K QA  RS RYLG   EVLV+S+NPK  N+V GR + NR+VF +G   EL G +++VR+ + + F L G +
Sbjct:   67 RFYTFEPSNIEYINFSCIQLTSESLADYILDAIKSNPSEFATLANQLSQCEFTKDSHGHFGWIPNPVITLSSQFTIDSPSPQCPQHIIHSIPSDLLQNAFQTRPLSVTKFYSESNHSWYVFLVNDALHKLHFETFSKGSTSKLGTDLRFEQN------------SYVIETMGCQANSSDSERMASALENAGFHAAKDPKSAHIVVLNTCAIREHAEHKVYGHLGVHAIRK-QRDSRVLLVVSGCVAQQEGETLLRKVPELDIIAGPQYANRLGELVKHVEENGVQICATNPIHVSEDLSNPVRTSKVTAWVNVIYGCNERCTYCVVPSTRGLEQSRSMVSIRNEIVKAAESGVKEIVLLGQNIDAYGRDLTPKNTFTQLLEYIHDVEGIKRIRFLTSHPRYMSSRLIDACAKLEKVCEHFHVPFQSGSDEILQKMSRGYTAQRYLQIIQNIRDKMPHAGISGDAIVGFPEESEEQFESTLDLMRSVGFDLVNTAAYSPRPNTPAALMKNQVPEEIKQERLKRINMLVKQQAAERSARYLGLIEEVLVESMNPKNENQVCGRTQGNRIVFFDGKLSELFGTLVQVRITQTHAFYLMGEV 651          
BLAST of Ggra8381.t1 vs. uniprot
Match: A0A7S0FYJ0 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0FYJ0_9RHOD)

HSP 1 Score: 525 bits (1352), Expect = 1.990e-178
Identity = 264/481 (54.89%), Postives = 352/481 (73.18%), Query Frame = 0
Query:  199 VTDVRHSVNATFLGATREKGFSVNPNM--RRTSKKKPIIIPKSFFIQTFGCQMNDSDSERMAAELEDEGYHQVDDPNKSAFYLLNTCALRDHAQQKVYSYLGPHAQRKWDAPQDVTLIVTGCVAQQEGEALLSRVPEIDIVMGPQYANRLADVINLYRMSKTQVVAVDPIHIHEDISKPKRSSKLTAWVNVIYGCNERCTYCVVPNTRGLEQSRPMSSIRKEMEALAAEGYREVVLLGQNVDAYGRDLSPKVTFSELLRYVHDVDGIERIRFTTGHPRYISGNLIDTVYELPKVMEHFHIPPQSGDSSVLKAMKRGYNRERYIQIVRRIRDKMPDASVCADMIVGFPGETEEAFQNSVTLADEIVFDSNMVRAYSARPNTSAASLPGQVSEQVKMERLSIMNKKMKHQAELRSRRYLGRCVEVLVDSLNPKRANEVSGRERTNRVVFCEGG-PELIGRIIEVRVQEAYPFSLRGTITQILK 676
            V D RH++  +      ++G  VN     R      P +I  ++ +QT GCQMN +DSE+M+ ELE  G+ ++DDP +S   + NTC++RDHA+QKVYSY+G HA+RKW  P+ VT++V+GCVAQQEGE LL R+PE+D+VMGPQY+NRL ++++       QV A +P+HI EDISKPKR+SK+TAWVN+IYGCNERC+YCVVP TRGLEQSRP  SI++E++ LA +G +EVVLLGQN+DAYGRDL P+ + ++LLR+VHDVDGIERIRFTT HPRY++  LI   YELPK+ E+FH+P QSGD  VLK MKRGY  +R+ QI  RIR  MPDA++ AD IVGFPGETEE FQ+++ L +EI FD+    AYS RPNT AA    QV+E VK+ERL  +N++    A  RS+RYLGR  E+LV+  N K   +V GR RTNR+ F +G   EL G+++ V+++EA  FSL G + ++++
Sbjct:    2 VEDARHTLQTSL----SKRGAPVNLTQIPRNQRDAIPEMIKGTYCVQTMGCQMNQADSEKMSGELEAAGFKEIDDPFRSNVIVFNTCSIRDHAEQKVYSYVGRHARRKWQNPE-VTIVVSGCVAQQEGEKLLRRIPEVDVVMGPQYSNRLRELLDSVNQGN-QVCATEPVHIMEDISKPKRNSKVTAWVNIIYGCNERCSYCVVPTTRGLEQSRPRDSIKEEIKQLAEQGVKEVVLLGQNIDAYGRDLRPRDSLADLLRFVHDVDGIERIRFTTSHPRYMTDRLIKACYELPKLCEYFHVPFQSGDDKVLKEMKRGYTAKRFKQIAERIRMYMPDAALSADAIVGFPGETEEEFQHTIDLMEEIRFDTVHTAAYSPRPNTLAAVWDTQVAEDVKVERLRRINEQTAKDAHDRSQRYLGRTEEILVEERNDKDPTQVLGRTRTNRLTFFKGNIDELRGKLVTVKIKEARTFSLTGELVEVIR 476          
BLAST of Ggra8381.t1 vs. uniprot
Match: A0A7S2S7D0 (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S7D0_9STRA)

HSP 1 Score: 507 bits (1306), Expect = 4.050e-169
Identity = 293/623 (47.03%), Postives = 392/623 (62.92%), Query Frame = 0
Query:   67 REAQRAAKPLVPLESP---TQRFYD------FSNHTVEAVRITHCQVVSDQMADFIVDSVRSKRSTLAELATLLSICDQTRTSAGDTGWIFLPAAMKPTISNQSPTNHSTYISDELLEKAIQSRPGSLQRTKLSYGWEIFTVTDVRHSVNA-TFLGATREKGF-----SVNPNMRRTSKKKPIIIPKSFFIQTFGCQMNDSDSERMAAELEDEGYHQVDDPN--KSAFYLLNTCALRDHAQQKVYSYLGPHAQRKWDAPQDVTLIVTGCVAQQEGEALLSRVPEIDIVMGPQYANRLADVINLYRMSKTQVVAVDPIHIHEDISKPKRSSKLTAWVNVIYGCNERCTYCVVPNTRGLEQSRPMSSIRKEMEALAAEGYREVVLLGQNVDAYGRDLSPKVTFSELLRYVHDVDGIERIRFTTGHPRYISGNLIDTVYELPKVMEHFHIPPQSGDSSVLKAMKRGYNRERYIQIVRRIRDKM--PDASVCADMIVGFPGETEEAFQNSVTLADEIVFDSNMVRAYSARPNTSAASLPGQVSEQVKMERLSIMNKKMKHQAELRSRRYLGRCVEVLVDSLNPKRANEVSGRERTNRVVFCEGG-PELIGRIIEVRVQEAYPFSLRG 669
            R A R AK +  LE+P   T+ +Y         +  V AVR++H  + + +MA   ++ V+S R    +LA  +SIC+++R   G  GW+ L         N +P +H   +       A++ +PG +  T+   G  +  + D+   +   T     R KG      S+   +   S  KP     ++F++T GCQMN +D+ERMA +LED G   V +    K+   +LNTC++RDHA+QKVYSYLGPHA RK    + V ++V GCVAQQEGE LL RVPE+D+VMGPQY+NR+ D++    M+  QVVA DP+HI ED++KP+R S + AWVNVIYGCNE CTYCVVP TRG+EQSRP  +IR+E+E L  +GYREV LLGQN+DA+GRD+ P+  FSELLR V  V GIER+RF T HPRY+S  +I  VYE     E FHIP QSGD+ VLK M+RGY RERY+ IVRRIR+K    D S+  D+IVGFPGETEE FQN++ L +E+ FD+ M  AYS RPNT AA+   QV E VK +RL  + +     A   S+RYL R  EV+V++ N K   +V GR RTNR VF +G   EL G+ + V++ E  P+SL G
Sbjct:   29 RAALRPAKMV--LETPASETKEWYPTKISQVIESKDVMAVRVSHVLLHTKEMATACLEQVKSGRD-FNDLALAISICEESREEGGKIGWVGL---------NDTPVDH--LLPAVARAHALEYKPGDVFLTETERGHHLVKIEDIMTRLKTRTKPRKPRLKGPGNELPSLTEQLSGLSGAKP-----TYFMETMGCQMNFADTERMAGQLEDLGLVPVSEEERLKANVIVLNTCSIRDHAEQKVYSYLGPHANRKRRG-EPVAIVVAGCVAQQEGEQLLRRVPEVDLVMGPQYSNRIGDLLEDV-MNGNQVVATDPLHIMEDVTKPRRGSTVCAWVNVIYGCNEHCTYCVVPGTRGVEQSRPREAIRQEVEDLVKQGYREVTLLGQNIDAWGRDMQPRQRFSELLRDVSSVPGIERVRFVTSHPRYMSPRVISAVYEEDSACEMFHIPFQSGDNEVLKNMRRGYTRERYLDIVRRIREKFGDKDVSITGDIIVGFPGETEEQFQNTLALLEEVKFDACMTAAYSPRPNTQAATWENQVPEDVKQDRLQRVKRACDTHALEVSQRYLHRTEEVMVETRNIKNPTQVMGRTRTNRQVFFDGDIDELKGKFVHVKITEVRPYSLSG 630          
BLAST of Ggra8381.t1 vs. uniprot
Match: A0A3M1KVF4 (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=1 Tax=Cyanobacteria bacterium J083 TaxID=2420336 RepID=A0A3M1KVF4_9CYAN)

HSP 1 Score: 498 bits (1283), Expect = 2.040e-168
Identity = 255/442 (57.69%), Postives = 321/442 (72.62%), Query Frame = 0
Query:  238 KSFFIQTFGCQMNDSDSERMAAELEDEGYHQVDDPNKSAFYLLNTCALRDHAQQKVYSYLGPHAQRKWDAPQDVTLIVTGCVAQQEGEALLSRVPEIDIVMGPQYANRLADVINLYRMSKTQVVAVDPIHIHEDISKPKRSSKLTAWVNVIYGCNERCTYCVVPNTRGLEQSRPMSSIRKEMEALAAEGYREVVLLGQNVDAYGRDLSP-------KVTFSELLRYVHDVDGIERIRFTTGHPRYISGNLIDTVYELPKVMEHFHIPPQSGDSSVLKAMKRGYNRERYIQIVRRIRDKMPDASVCADMIVGFPGETEEAFQNSVTLADEIVFDSNMVRAYSARPNTSAASLPGQVSEQVKMERLSIMNKKMKHQAELRSRRYLGRCVEVLVDSLNPKRANEVSGRERTNRVVFCEGG-PELIGRIIEVRVQEAYPFSLRGTI 671
            +++ I TFGCQMN +DSERMA  LED G+   +DP  +   L NTC +RD+A+QKVYSYLG  A+RK   P ++TLIV GCVAQQEGE LL RVPE+D+VMGPQ+ANRL D++     +  QVVA +PIHI EDI+KP+R SK+TAWVN+IYGCNERC+YCVVPN RG+EQSRP ++IR EME +A +GY+EV LLGQN+DAYGRDL         K TF++LL YVHD+ GIERIRF T HPRY +  LI   YELPKV EHFHIP QSGD+ +LKAMKRGY  E+Y +I+ +IR+ MP A++ AD IVGFPGETEE FQN++ L D+I FD     AYS RP T AA    QVSE+VK +RL  +N  +  +A +RS+RY  +  EVLV+ +NPK   +V GR R NR+ F  G   +L G I++V++ +  PFSL G I
Sbjct:    6 RNYHITTFGCQMNKADSERMAGILEDMGFQWSEDPTSADIILYNTCTIRDNAEQKVYSYLGKQAKRKHQQP-NLTLIVAGCVAQQEGEKLLRRVPELDLVMGPQHANRLQDLLEQV-FNGNQVVATEPIHILEDITKPRRDSKVTAWVNIIYGCNERCSYCVVPNVRGVEQSRPPAAIRAEMEEIAKQGYKEVTLLGQNIDAYGRDLPGVTETGRHKHTFTDLLYYVHDIPGIERIRFATSHPRYFTERLIKACYELPKVCEHFHIPFQSGDNEILKAMKRGYTHEKYRRIIAKIREYMPHAAISADAIVGFPGETEEQFQNTLQLVDDIGFDQLNTAAYSPRPGTPAAVWHNQVSEEVKSDRLQRLNHLVAQKAAIRSQRYTDKIEEVLVEDVNPKDPTQVMGRTRGNRLTFFAGDIKQLKGEIVKVKITQVRPFSLTGEI 445          
BLAST of Ggra8381.t1 vs. uniprot
Match: MIAB (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=78 Tax=Microcystis TaxID=1125 RepID=MIAB_MICAN)

HSP 1 Score: 496 bits (1277), Expect = 1.480e-167
Identity = 258/444 (58.11%), Postives = 320/444 (72.07%), Query Frame = 0
Query:  237 PKSFFIQTFGCQMNDSDSERMAAELEDEGYHQVDDPNKSAFYLLNTCALRDHAQQKVYSYLGPHAQRKWDAPQDVTLIVTGCVAQQEGEALLSRVPEIDIVMGPQYANRLADVINLYRMSKTQVVAVDPIHIHEDISKPKRSSKLTAWVNVIYGCNERCTYCVVPNTRGLEQSRPMSSIRKEMEALAAEGYREVVLLGQNVDAYGRDLSPKVT--------FSELLRYVHDVDGIERIRFTTGHPRYISGNLIDTVYELPKVMEHFHIPPQSGDSSVLKAMKRGYNRERYIQIVRRIRDKMPDASVCADMIVGFPGETEEAFQNSVTLADEIVFDSNMVRAYSARPNTSAASLPGQVSEQVKMERLSIMNKKMKHQAELRSRRYLGRCVEVLVDSLNPKRANEVSGRERTNRVVFCEGG-PELIGRIIEVRVQEAYPFSLRGTI 671
            P+ + I TFGCQMN +DSERMA  LED G+   +D N++   L NTC +RD+A+QKVYSYLG  A+RK   P D+TLIV GCVAQQEGE LL RVPE+D+++GPQ+ANRL D++       +QVVA +PIHI EDI+KP+R S +TAWVNVIYGCNERCTYCVVP  RG+EQSR  ++IR EM  L  +GY+E+ LLGQN+DAYGRDL P VT        F++LL YVHDV GIER+RF T HPRY +  LI    ELPKV EHFHIP QSGD+ +LKAMKRGY +E+Y QI+  IRD MPDA++ AD IVGFPGETE  F+N++ L DEI FD     AYS RP T AA    Q+SEQVK +RL  +N  +  +A  RS+RYLGR  E+LV+ +NPK A++V GR R NR+ F  G   EL G+ ++V++ E  PFSL G I
Sbjct:    5 PRRYHITTFGCQMNKADSERMAGILEDLGFQWSEDANEADLILYNTCTIRDNAEQKVYSYLGRQAKRKQTQP-DLTLIVAGCVAQQEGEQLLRRVPEVDLIIGPQHANRLGDLLQQV-FDGSQVVATEPIHIMEDITKPRRDSNITAWVNVIYGCNERCTYCVVPGVRGVEQSRTPAAIRAEMAQLGQQGYQEITLLGQNIDAYGRDL-PGVTASGRHLHNFTDLLYYVHDVAGIERLRFATSHPRYFTERLIKACQELPKVCEHFHIPFQSGDNDILKAMKRGYTQEKYRQIIANIRDLMPDAAISADAIVGFPGETEAQFENTLKLVDEIGFDQLNTAAYSPRPGTPAAIWDDQLSEQVKSDRLQRLNHLVATKAAERSQRYLGRIEEILVEDVNPKDASQVMGRTRGNRLTFFTGDIEELRGKFVKVKITEVRPFSLTGVI 445          
BLAST of Ggra8381.t1 vs. uniprot
Match: A0A7S2ZBX3 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZBX3_9RHOD)

HSP 1 Score: 501 bits (1290), Expect = 5.250e-167
Identity = 269/581 (46.30%), Postives = 371/581 (63.86%), Query Frame = 0
Query:   93 TVEAVRITHCQVVSDQMADFIVDSVRSKRS-TLAELATLLSICDQTRTSAGDTGWIFLPAAMKPTISNQSPTNHSTYISDELLEKAIQSRPGS-LQRTKLSYGWEIFTVTDVRHSVNATFLGATREKGFSVNPNMRRTSKKKPIIIPKSFFIQTFGCQMNDSDSERMAAELEDEGYHQVDDPNKSAFYLLNTCALRDHAQQKVYSYLGPHAQRKWDAPQDVTLIVTGCVAQQEGEALLSRVPEIDIVMGPQYANRLADVINLYRMSKTQVVAVDPIHIHEDISKPKRSSKLTAWVNVIYGCNERCTYCVVPNTRGLEQSRPMSSIRKEMEALAAEGYREVVLLGQNVDAYGRDLSPKVTFSELLRYVHDVDGIERIRFTTGHPRYISGNLIDTVYELPKVMEHFHIPPQSGDSSVLKAMKRGYNRERYIQIVRRIRDKMPDASVCADMIVGFPGETEEAFQNSVTLADEIVFDSNMVRAYSARPNTSAASLPGQVSEQVKMERLSIMNKKMKHQAELRSRRYLGRCVEVLVDSLNPKRANEVSGRERTNRVVFCEGG-PELIGRIIEVRVQEAYPFSLRGT 670
            T +  R+ H  V+S+++ DF+++  R   + ++ + +  +S+C  ++ + GD GW                    T+   E+++    + P + + + + + GW    V DV+ ++  T    TR        N+ +   K+      S+FI+T GCQMN SDSERMA ELE  G        ++   + NTC++R+HA+ K+YS LGP AQRKW  P ++ ++V GCVAQQE   L  RVPE+D+++GPQYANRL +++        QVVA +  HI ED+SKP R   ++AWVN+IYGCNERCTYCVVPNTRG+EQSR   +IR E+E LA +GYREV LLGQN DAYGRDL P+VTF+ELLR VHDVDGIERIRFTT HPRY + NL +T  EL KV E F++P QSGD+ VLKAM RGY  ERY +++R+IR+++PDA++ AD IVGFPGETEE FQN++ L +EI FD     AYS RPNT  A++  QVS+  K  RL   N++ +  +  R++RYLGR  EVLV   N +   +V GR R NRV + EG   EL G+++ V++ E   F+L GT
Sbjct:   51 TEDRFRVLHVLVLSEELCDFVIEEGRKNGAESIRKYSESISVCKASKHNGGDLGW----------------HTKQTFPFPEIVDVVSSTDPHTGVFKARSASGWHAVYVDDVKRAIELTSWTPTRTFR-RTGQNLGKIRVKREQQEWNSYFIETHGCQMNKSDSERMAGELEAMGMQVARTMKEADVIVFNTCSIREHAEHKLYSQLGPIAQRKWTYP-NIAVVVAGCVAQQEASRLARRVPEVDLIVGPQYANRLGELLQDVAQGN-QVVATEASHITEDLSKPIRVGGISAWVNIIYGCNERCTYCVVPNTRGVEQSRTPQAIRAEIEELARQGYREVTLLGQNTDAYGRDLKPRVTFAELLRTVHDVDGIERIRFTTSHPRYFTKNLAETCSELSKVCESFNVPFQSGDTDVLKAMNRGYTVERYREVIRQIREEIPDAAITADTIVGFPGETEEQFQNTLELMEEIQFDHVHTAAYSPRPNTPGATMENQVSDSEKESRLRRANRRNEMDSLSRNQRYLGRVEEVLVTERNSRNEKQVMGRTRKNRVTYFEGNIEELRGKLVPVKIVEVGTFTLTGT 612          
The following BLAST results are available for this feature:
BLAST of Ggra8381.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IGB20.000e+075.58tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]
R7QN233.210e-26766.43Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QB291.960e-20150.75Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3J0371.680e-19846.82tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]
A0A7S0ZI686.450e-18448.49Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S0FYJ01.990e-17854.89Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S2S7D04.050e-16947.03Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A3M1KVF42.040e-16857.69tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]
MIAB1.480e-16758.11tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]
A0A7S2ZBX35.250e-16746.30Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006638Elp3/MiaB/NifBSMARTSM00729MiaBcoord: 381..599
e-value: 2.6E-51
score: 186.5
IPR013848Methylthiotransferase, N-terminalPFAMPF00919UPF0004coord: 240..339
e-value: 3.7E-27
score: 94.2
IPR013848Methylthiotransferase, N-terminalPROSITEPS51449MTTASE_Ncoord: 238..355
score: 31.19137
NoneNo IPR availableGENE3D3.10.50.40coord: 93..208
e-value: 2.9E-5
score: 26.3
NoneNo IPR availableTIGRFAMTIGR01574TIGR01574coord: 240..671
e-value: 5.4E-134
score: 445.4
NoneNo IPR availableSFLDSFLDG01082B12-binding_domain_containingcoord: 314..560
e-value: 4.8E-23
score: 76.2
NoneNo IPR availablePANTHERPTHR43020CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 1coord: 232..673
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..676
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availableCDDcd01335Radical_SAMcoord: 385..594
e-value: 4.87051E-9
score: 54.6469
NoneNo IPR availableSUPERFAMILY102114Radical SAM enzymescoord: 364..603
IPR023404Radical SAM, alpha/beta horseshoeGENE3D3.80.30.20tm_1862 like domaincoord: 379..613
e-value: 3.8E-79
score: 267.4
IPR007197Radical SAMPFAMPF04055Radical_SAMcoord: 385..554
e-value: 1.3E-25
score: 90.7
IPR007197Radical SAMPROSITEPS51918RADICAL_SAMcoord: 377..608
score: 32.968327
IPR038135Methylthiotransferase, N-terminal domain superfamilyGENE3D3.40.50.12160coord: 239..370
e-value: 8.2E-32
score: 111.6
IPR002792TRAM domainPFAMPF01938TRAMcoord: 610..671
e-value: 3.2E-11
score: 43.1
IPR002792TRAM domainPROSITEPS50926TRAMcoord: 610..673
score: 15.201829
IPR005839MethylthiotransferaseTIGRFAMTIGR00089TIGR00089coord: 240..669
e-value: 1.7E-140
score: 466.6
IPR005839MethylthiotransferaseSFLDSFLDG01061methylthiotransferasecoord: 238..673
e-value: 0.0
score: 506.3
IPR006463tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaBSFLDSFLDF00273(dimethylallyl)adenosine_tRNAcoord: 238..673
e-value: 0.0
score: 506.3
IPR020612Methylthiotransferase, conserved sitePROSITEPS01278MTTASE_RADICALcoord: 385..405
IPR000297Peptidyl-prolyl cis-trans isomerase, PpiC-typePROSITEPS50198PPIC_PPIASE_2coord: 94..201
score: 9.004548

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:293829..295859 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8381.t1Ggra8381.t1Gracilaria gracilis GNS1m malemRNAtig00000041_pilon 293829..295859 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8381.t1 ID=Ggra8381.t1|Name=Ggra8381.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=677bp
MNSKTAFASPLPLLSFLGGLHASLPSEFNCSSCVSHNAIRSDVHRLASIV
AVSTPSPANNSPTSSVREAQRAAKPLVPLESPTQRFYDFSNHTVEAVRIT
HCQVVSDQMADFIVDSVRSKRSTLAELATLLSICDQTRTSAGDTGWIFLP
AAMKPTISNQSPTNHSTYISDELLEKAIQSRPGSLQRTKLSYGWEIFTVT
DVRHSVNATFLGATREKGFSVNPNMRRTSKKKPIIIPKSFFIQTFGCQMN
DSDSERMAAELEDEGYHQVDDPNKSAFYLLNTCALRDHAQQKVYSYLGPH
AQRKWDAPQDVTLIVTGCVAQQEGEALLSRVPEIDIVMGPQYANRLADVI
NLYRMSKTQVVAVDPIHIHEDISKPKRSSKLTAWVNVIYGCNERCTYCVV
PNTRGLEQSRPMSSIRKEMEALAAEGYREVVLLGQNVDAYGRDLSPKVTF
SELLRYVHDVDGIERIRFTTGHPRYISGNLIDTVYELPKVMEHFHIPPQS
GDSSVLKAMKRGYNRERYIQIVRRIRDKMPDASVCADMIVGFPGETEEAF
QNSVTLADEIVFDSNMVRAYSARPNTSAASLPGQVSEQVKMERLSIMNKK
MKHQAELRSRRYLGRCVEVLVDSLNPKRANEVSGRERTNRVVFCEGGPEL
IGRIIEVRVQEAYPFSLRGTITQILK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006638Elp3/MiaB/NifB
IPR013848Methylthiotransferase_N
IPR023404rSAM_horseshoe
IPR007197rSAM
IPR038135Methylthiotransferase_N_sf
IPR002792TRAM_dom
IPR005839Methylthiotransferase
IPR006463MiaB_methiolase
IPR020612Methylthiotransferase_CS
IPR000297PPIase_PpiC