Ggra8374.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8374.t1
Unique NameGgra8374.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1534
Homology
BLAST of Ggra8374.t1 vs. uniprot
Match: A0A2V3IGA3 (Cohesin subunit SA-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGA3_9FLOR)

HSP 1 Score: 1455 bits (3766), Expect = 0.000e+0
Identity = 806/1324 (60.88%), Postives = 1012/1324 (76.44%), Query Frame = 0
Query:    1 MPTDDGAGSPS-GDEQPNDQLPPASPQHMFDDDTDM------PGGGGPSADLPADAQRPAEGGDDHSAVEHVNPQPDDNHDSHPSNPERNPATSEPDPPAEVPQTETRAPSQTPAQAATRHDEDEHVDHDHDDTASQTSSTLFEKILHRPARAPGLVSAWMNHVSINGPEAMAALVSLVICAARPIPFAHEQLVTPEMIISNDPQESIKEMCQKMAVDAPERVVVLAKDTASRRVRRAYEDFWRRIAAEASEVVLYRTDCFDTLIPWLDAMSTSLIRALRVSACFAAYRLVDGFIEVNTQLRKHLVSIQRQFNTEKRRSGINVRDPNTNSSKGRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELSDRVYRTMFICRYRDISADVRSMSISALGGWIILFPEQFLDDTHNKYIGWLLSDKDASVRKTCLDVLHKMLKKKDYFASFETFLQRFSDRILEMAWDKDDLVAITAIRLLNFLLPHNNNNKLLRPSHCESICAIALGDNHTEIRRAAGEFLATLVTMDIDNVSAPVAKSKRAYRKRGRRRSSSGPFNTLLREIPPVERAKDDIRELLYAIARKEDEPVDEALTVDAVWDHLPALRCWQAFEELLLENPESSSANEDEEALSGAEKGVLCRILLASAAEAGGNGDSNRAKIVEKGEYAEPETPSVLLSKQFLPRLPRLLSQFQSDPSAVRALIQLPRHFTMSTFEQQGQDSYFSTLLERVIGVLLKHTGSAEVTAACAETLRYFLSDQNPLKKTACTSLQLCCQRATKDLALQVRAGLSTAEPDNIAALMSQVRVLSELVDSDISTFEAVKEVLLFQENNLGSSEVDTTVTFDAIRVVCAFAVWSLSRIKSRMASTGSSETLLEDTLNLEEMKEYRKHGADVVGILQSICGKGSMPIPVRLLSARCLLIILTLCRGMEKNAMMMIIRGRSDPGN-SMAAPDMDILSLKDSIQGLVEVIRSIVFTLVESELEQHKSRTPRRSRDASIPNESDRKDFFACLVQASLQSVLSRSISHLPLFGILLKGEREERGSEANEYTSSRVCRDYLQQRQIRRTSLMRDIIRALGEVTGLKCSKEEHQNLIRELAECCVSFRYRRDLKTKASAELLQALMDHCSSSTTEPNFVDNLQLLSSASFSVVACISQEDGQKAMEQISAIDELLVKYKDAVNEDLMNSFEICRSSIKAVADGETPDVPSFSKLTDRPTSNRRVHSRRRRRRLQSPKAHTPPPEPINIRKSSRVRKKVDYARMEIYESDENNEDEEPGS-EVGEDEVGPSEPTVAEVARDMMEYQNSPVAVRKRASREVPSADLSPTKRRKR 1315
            MP ++   SP  GD   +DQ  P+SP+H+FDDD +M      P     S   P+   +  EGG   +     N Q D   + H  N    PA ++P        +        P +      +D+ ++  + D++ Q S  LF+ +LH+P+ +PGLV+AWM+HVSINGPEAMAA+VSLVI AARP+PF+ EQLVT +MII+N+PQE ++++CQ +AVDAPE+VVVLAKDT SRRVRR YEDFWRR+AAEA ++VLY TDCF+TLIPWL++MS+S IRALRVSA  AAYRLVDGFIEV TQLRKHL SIQRQ NTEKRRSGI+ R+ +   +K RAA         XXXXXXXXXXXXXXXXXXXXXXELSDRVYR++FI RYRDI ADVRSMS+SALGGWI++FP+QFLDDTHNKYIGWLLSDKDA VRKT L+VLH+MLKKK+YFA+FETFLQRF DRI++MA DKDD VA TAIRLLNFLLPHN+N+KLLRP+ CESIC IAL D+HT++RRAAGEFL T+VTMDID+V +  +K  R  RKR  +R+S+GPFNTLLREIPPVERA++DIRELL+AI RK ++ VD AL VDAVWD+LP+LRCWQAFEELLLE+ +  +A++D EALS +EKGVLC +LLASAAEA GNGD  RA+IVEKGEY++PETP  LLSK FLP LPRLLSQ+QSDP  +  L+QLPRHFTM+TFEQQGQD +FS +LER+IGVL+KHTGS EV++ACAETLR FLS+QNPLKK  CTSLQLCCQR +KDLALQ+R  L+ AEPDN+AALMSQ+R+L+ELVDSD ST+E VKEVL FQE N   S ++  VT DA R  CAFAVWSLS+I+SR+ +TGSS+T  E  + LEE++EYR  GADV+ ILQ IC   S+P+ VRLL +RC+LI+LTLCRG+EKN  MMI+R R++  N S A PD+D+LSLK++I  LV++ RS+V TLVE EL+    R   R+R  +   E + +DFFA LVQASLQS+LSR ISHLPLFG+L+K  R+E  +E+NEYTS RVCRDYLQQRQIR  +L RDI+ AL EV  L+C K+E Q++IRELA+ CVSFR+RRDLK K S +LL AL DHC  ++   +FV  L +LSS+SF++++  SQED +  M  +  ID+L  KY +A++++L++ F+   SS++A+ADG  P++P   + ++RP S R   S+R      SP +HTPPPEP N+RKSSR + +VDYARME Y  D+N + +E G  E   +++  +  T A+VAR+MMEYQNSPVA+RKRA+REVP A  +P KR +R
Sbjct:    1 MPPEERPSSPGPGDGSDDDQ--PSSPKHVFDDDVEMQSISVNPTHPQDSDGSPSTVPQ-GEGGQ--TTANQTNMQ-DAEQNQHSKNSTPLPAHTDPS-------SSHETAGDPPRRVVEPSQDDQALEQPNQDSSVQ-SPLLFDTMLHKPSSSPGLVTAWMSHVSINGPEAMAAIVSLVISAARPVPFSREQLVTSDMIIANEPQEIVRDLCQVLAVDAPEKVVVLAKDTPSRRVRRTYEDFWRRVAAEAPDIVLYHTDCFETLIPWLESMSSSPIRALRVSASLAAYRLVDGFIEVGTQLRKHLASIQRQLNTEKRRSGISQRNDSARGAKKRAAQGKDKKKELXXXXXXXXXXXXXXXXXXXXXXELSDRVYRSIFIGRYRDIYADVRSMSLSALGGWIMMFPDQFLDDTHNKYIGWLLSDKDAVVRKTSLEVLHRMLKKKEYFANFETFLQRFCDRIIDMACDKDDTVAATAIRLLNFLLPHNSNDKLLRPAQCESICDIALEDHHTDVRRAAGEFLTTMVTMDIDDVPSSASKRSRVQRKRNGKRTSTGPFNTLLREIPPVERAREDIRELLFAIVRKGEDGVDAALAVDAVWDYLPSLRCWQAFEELLLEDQQPDTASQDGEALSDSEKGVLCEMLLASAAEASGNGDPMRARIVEKGEYSDPETPGTLLSKHFLPLLPRLLSQYQSDPKTISTLVQLPRHFTMTTFEQQGQDGHFSAMLERIIGVLVKHTGSEEVSSACAETLRNFLSEQNPLKKATCTSLQLCCQRVSKDLALQIRTDLAKAEPDNVAALMSQLRILTELVDSDSSTYEVVKEVLEFQERNGDLSGLNDHVTIDASRSACAFAVWSLSKIRSRLITTGSSQTSHEKIMELEEVQEYRNQGADVIDILQRICACDSVPLAVRLLCSRCILIVLTLCRGIEKNMSMMILRKRTESDNASPADPDLDLLSLKETIPQLVDMTRSVVTTLVEYELKLSSPRGSGRNRGQAGLQEREVRDFFASLVQASLQSLLSRHISHLPLFGVLIK-PRKEAKAESNEYTSFRVCRDYLQQRQIRGNALSRDIVGALHEVLKLQCDKKERQSIIRELADICVSFRHRRDLKAKGSIDLLHALFDHCVEASDATDFVGKLFVLSSSSFALISHFSQEDAKGMMGSMKTIDDLRNKYAEALDDELIDLFDHFHSSLEAIADGRPPELPPMMRASERPRSQRGPRSKRXXXXXTSPSSHTPPPEPSNVRKSSRQKARVDYARMENYSGDDNEDGDEEGILEQDSEDIKTTATTAADVARNMMEYQNSPVAIRKRANREVPDASPNPPKRTRR 1309          
BLAST of Ggra8374.t1 vs. uniprot
Match: R7QBF1 (SCD domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBF1_CHOCR)

HSP 1 Score: 691 bits (1784), Expect = 3.930e-219
Identity = 439/1199 (36.61%), Postives = 677/1199 (56.46%), Query Frame = 0
Query:  102 APSQTPAQAATRHDEDEHVDHDHDDTASQTSSTLFEKILHRPARAPGLVSAWMNHVSINGPEAMAALVSLVICAARPIPFAHEQLVTPEMIISNDPQESIKEMCQKMAVDAPERVVVLAKDTASRRVRRAYEDFWRRIAAEASEVVLYRTDCFDTLIPWLDAMSTSLIRALRVSACFAAYRLVDGFIEVNTQLRKHLVSIQRQFNTEKRRSGINVRDPNTNSSKGRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELSDRVYRTMFICRYRDISADVRSMSISALGGWIILFPEQFLDDTHNKYIGWLLSDKDASVRKTCLDVLHKMLKKKDYFASFETFLQRFSDRILEMAWDKDDLVAITAIRLLNFLLPHNNNNKLLRPSHCESICAIALGDNHTEIRRAAGEFLATLVTMDIDNVSAPVA--KSKRAYRKRGRRRSSSGPFNTLLREIPPVERAKDDIRELLYAIAR--KEDEPVDEALTVDAVWDHLPALRCWQAFEELL----------LENPESSSANEDEEALSGAEKGVLCRILLASAAEAGGNGDSNRAKIVEKGEYAEPETPSVLLSKQFLPRLPRLLSQFQSDPSAVRALIQLPRHFTMSTFEQQGQDSYFSTLLERVIGVLLKHTGSAEVTAACAETLRYFLSDQNPLKKTACTSLQLCCQRATKDLALQVRAGLSTAEPDNIAALMSQVRVLSELVDSDISTFEAVKEVLLFQENNLGSSEVDTTVTFDAIRVVCAFAVWSLSRIKSRMASTGSSET---LLEDTLNLEEMKEYRKHGADVVGILQSICGKGSMPIPVRLLSARCLLIILTLCRGMEKNAMMMIIRGRSDPGNSMAAPDMDILSLKDSIQGLVEVIRSIVFTLVESELEQHKSRTPRRSRDASIPN----ESDRKDFFACLVQASLQSVLSRSISHLPLFGILLKGEREERGSEAN-EYTSSRVCRDYLQQRQIRRTSLMRDIIRALGEVTGLKCSKEEHQNLIRELAECCVSFRYRRDLKTKASAELLQALMDHCSSSTTEPNFV-DNLQLLSSASFSVVACISQEDGQKAMEQISAI-DELLVKYKDAVNE--DLMNSFEICRSSIKAVADGETPDVPSFSKLTDRPTSNRRVHSRRRRRRLQSPKA--HTPPPEPI-NIRKSSRVRKKVDYARMEIYESDENNEDEEPGSEVGEDEVG 1271
            AP +T A  +   D+DE ++   DD        LF K+   P+   GLV+ W+  V +NGP A+A ++SLV+  ARPI       +TP+M+++NDP  S+  +   +  D P  V    KD+ S+++RRAYEDFWRR+ AE+S+VVL+ TDCFDTLI WLDAM+T+  RALR++AC AA+RLVDG I+   +LRK L S+QRQ  TEKRR G+  + P     K R+                                 LS +V+ ++ + +YRD+SA++R +S++ALG WI+  P+ FLDD H KYIGWLLSDK+  VR++ L+VL +ML+KKD+++S E FLQRF DRI EMA DKDD VA+ AIRLL  L   +  ++ ++ S    IC IAL ++ T++RRAAGEFL+ ++T      S+      ++R   K+  + +S    N  L EIP ++R+ DDI++L+   +   ++   VD+   VDAVWDHLPALRCW+A+ +L           + +  +  A   E +  G +  + C ILLASA EA G+GD  R+ +V++GE    ETP    S +FLP L  LL QFQ+D  A+ AL+QLP  F M   E++G + + + +L R++ ++ +HTGS  +   CAETL++  SD +P K  A T+LQ  C  A+KDL++ VRA +S AEP +I+A + +VRV+SEL + ++S + +  +VL +Q  N  +S++ + +T DA+R  CA   W L++I++R+ S  S      L++D +     K+ R  GA+++ IL  IC   S  I  R+L  + LL  LTLC G+E        +G S P         D L  ++  + + + ++     ++E EL    S   R S D S  +    E + +D FA LVQASLQS LS  I+HLP+ G+L++ ++         E++  ++C+ Y QQRQ+++T  +     AL EV  +K   E     +R L +  ++ R     K  A+ +LL+ L+    +   +   V   +++L+ A F+++  ++  D +  +  +  I D +L  Y     E   ++++F  C   +K+ A  E PD+P   K   R T+ RR  S RRR+R     A  H+     + N+R+S R  K++DYAR+   E +E+  D+    ++  D  G
Sbjct:   17 APERTKAILSHEDDQDEVLEPAEDD--------LFSKLAAAPSSVAGLVTEWLALVQVNGPAAVADVLSLVVRLARPIGCPPLAAITPQMVVANDPSSSVLRISHLLREDVPGPVPTAGKDSVSKKLRRAYEDFWRRLTAESSKVVLFDTDCFDTLISWLDAMTTAKSRALRMAACLAAFRLVDGLIDFGGRLRKELSSMQRQLATEKRRCGMAPKQPRAAGRKKRSKKGVDLPIALSKKGKDLTRKVDEMTAHNSELIALSSKVFDSILVLKYRDVSAEIRQISVTALGCWILSCPDHFLDDKHTKYIGWLLSDKEPVVRRSTLEVLSRMLRKKDFYSSLEMFLQRFCDRITEMARDKDDTVAVAAIRLLTTLSGFDIFDENVKVS----ICHIALKESQTDVRRAAGEFLSRMITSTTSEKSSRKCADSTRRDLLKKKLKPASGDVQNPALLEIPALDRSMDDIQQLMAKCSGVVRDIRAVDQV--VDAVWDHLPALRCWEAYMKLFKTDRNMTGERILSTTTPHAKGKEGSSGGEDHALTCEILLASAREASGHGDPQRSSVVQRGERDSIETPCTKFSAEFLPELSHLLVQFQADVRALCALVQLPMFFEMQYLEKEGIEVHLNDILSRLVDLISRHTGSLRLVKICAETLKFLSSDGSPCKNLAQTTLQRACSAASKDLSIHVRADISAAEPLSISAGLLRVRVMSELAEPNVSVYSSAVKVLQYQIQNSSTSKLTSDITTDAVRTGCAVIAWCLAKIRARLESDKSDHADYGLVDDAV-----KDARDRGAELIDILAQICHSNSFSISCRMLCLQGLLTALTLCAGVESFYKS---KGFSRP---------DFLGAREVSRDIADAVKVCTLAIIEFELAAVDSNLMRDSHDGSKAHGHQPEMEVRDCFASLVQASLQSALSAKIAHLPMLGLLVRAKKHLSSDPIPYEWSCIQLCKRYCQQRQVKKTIRIEQERMALREVADIKT--EHLFQPVRRLTDNILALREPGTGKEAAARDLLECLIGSVVACYGKAEDVCKEVRVLTEAGFAILPHLTVNDARVLLPMLQPITDTILSDYVRDAGEMVAILSNFISC---LKSRAANEVPDIPKLHKPLSRDTNIRRKQSSRRRKRTAVDGAAYHSSSHVDLSNVRRSKRSMKRLDYARLSGLEGEEDLADDSASDQMESDGEG 1179          
BLAST of Ggra8374.t1 vs. uniprot
Match: A0A2V3J5C7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5C7_9FLOR)

HSP 1 Score: 637 bits (1642), Expect = 7.860e-206
Identity = 346/616 (56.17%), Postives = 455/616 (73.86%), Query Frame = 0
Query:  702 MSTFEQQGQDSYFSTLLERVIGVLLKHTGSAEVTAACAETLRYFLSDQNPLKKTACTSLQLCCQRATKDLALQVRAGLSTAEPDNIAALMSQVRVLSELVDSDISTFEAVKEVLLFQENNLGSSEVDTTVTFDAIRVVCAFAVWSLSRIKSRMASTGSSETLLEDTLNLEEMKEYRKHGADVVGILQSICGKGSMPIPVRLLSARCLLIILTLCRGMEKNAMMMIIRGRSDPGN-SMAAPDMDILSLKDSIQGLVEVIRSIVFTLVESELEQHKSRTPRRSRDASIPNESDRKDFFACLVQASLQSVLSRSISHLPLFGILLKGEREERGSEANEYTSSRVCRDYLQQRQIRRTSLMRDIIRALGEVTGLKCSKEEHQNLIRELAECCVSFRYRRDLKTKASAELLQALMDHCSSSTTEPNFVDNLQLLSSASFSVVACISQEDGQKAMEQISAIDELLVKYKDAVNEDLMNSFEICRSSIKAVADGETPDVPSFSKLTDRPTSNRRVHSRRRRRRLQSPKAHTPPPEPINIRKSSRVRKKVDYARMEIYESDENNEDEEPGS-EVGEDEVGPSEPTVAEVARDMMEYQNSPVAVRKRASREVPSADLSPTKRRKR 1315
            M+TF+QQGQD +FS +LER+IGVL+KHTGS EV++ACAETLR FLS+QNPLKK  CTSLQLCCQR +KDLALQ+R  L+ AEPDN+AALMSQ+R+L+ELVDSD ST++ VKEVL FQE N   S ++  VT DA R  CAF+V + S+I+SR+ +TGSS+T  E  + LEE++EYR  GADV+ ILQ IC   S+P+ VRLL +RC+LI+LTLC G+EKN  MMI+R R++  N S A PD+D LSLK++I  LV + RS+V TLVE EL+    R   R+R  +   E + +DFFA LVQASLQS+LSR ISHLPLFG+L+K  R+E  +E+NEYTS RVCRDYLQQRQI   +L RDI+ AL EV  L+C K+E Q++IRELA+ CV FR+RRDLK K S +LL AL DHC+ ++   +FV  L +LSS+SF++++  SQED +  M  +  ID L  KY +A++++L++ F+   SS +A+ADG  P++P   + ++RP S R   S+R      SP +HTPPPEP N+ KSSR + +VDYARME Y SD+N + +E G  E   +++  +  T A+VAR+MMEYQNSPVA+RKRA+REVP A LSP KR +R
Sbjct:    1 MTTFDQQGQDGHFSAMLERIIGVLVKHTGSEEVSSACAETLRNFLSEQNPLKKETCTSLQLCCQRVSKDLALQIRTDLAKAEPDNVAALMSQLRILTELVDSDSSTYKVVKEVLEFQERNGDLSGLNDHVTIDASRSACAFSVCTFSKIRSRLITTGSSQTSHEKIMELEEVQEYRNQGADVIDILQRICACDSVPLAVRLLCSRCILIVLTLCHGIEKNMSMMILRKRTESDNASPADPDLDFLSLKETIPQLVYMTRSVVTTLVEYELKLSSPRGSGRNRGQAGLQEREVRDFFASLVQASLQSLLSRHISHLPLFGVLIK-PRKEAKAESNEYTSFRVCRDYLQQRQICGNALSRDIVGALHEVLKLQCDKKERQSIIRELADICVLFRHRRDLKAKGSIDLLHALFDHCAEASDATDFVGKLFVLSSSSFALISHFSQEDAKGMMGSMKTIDHLRNKYAEALDDELIDLFDHFHSSFEAIADGRPPELPPMMRASERPRSQRGPRSKRXXXXXXSPTSHTPPPEPSNVIKSSRQKARVDYARMENYSSDDNEDGDEEGILEQDSEDIKTTATTAADVARNMMEYQNSPVAIRKRANREVPDASLSPPKRTRR 615          
BLAST of Ggra8374.t1 vs. uniprot
Match: A0A2V3IY21 (Cohesin subunit SA-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY21_9FLOR)

HSP 1 Score: 578 bits (1489), Expect = 3.550e-189
Identity = 320/454 (70.48%), Postives = 385/454 (84.80%), Query Frame = 0
Query:  139 ILHRPARAPGLVSAWMNHVSINGPEAMAALVSLVICAARPIPFAHEQLVTPEMIISNDPQESIKEMCQKMAVDAPERVVVLAKDTASRRVRRAYEDFWRRIAAEASEVVLYRTDCFDTLIPWLDAMSTSLIRALRVSACFAAYRLVDGFIEVNTQLRKHLVSIQRQFNTEKRRSGINVRDPNTNSSKGRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELSDRVYRTMFICRYRDISADVRSMSISALGGWIILFPEQFLDDTHNKYIGWLLSDKDASVRKTCLDVLHKMLKKKDYFASFETFLQRFSDRILEMAWDKDDLVAITAIRLLNFLLPHNNNNKLLRPSHCESICAIALGDNHTEIRRAAGEFLATLVTMDIDNVSAPVAKSKRAYRKRGRRRSSSGPFNTLLREIPPVERAKDDIRELLYAIARKEDEPVDEALTVDAVWDH 592
            +LH+P+ +PGL +AWM+HVSINGPEAMAA+VSLVI AARP+PF+ EQLVT +MII+N+PQES++++CQ +AVDAPE+VVVLAK+T SRRVRR YEDFWRR+A+E  ++VLY TDCF+TLIPWL++MS S I+ LRVSA  AAY  VDGFI+V TQLRK L SIQRQ  TEKRRSGI+ R+ +   +K RAA  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXELSD+VYR++FI RYRD  A+VRSMS+SALGGWI++FP+  LD+THNK IGWLLSDKDA VRKT L+VLH+MLKKK+YFA+FETFLQRF DRI++MA DKDD VA  AIR LNFLLPHN+N+KLLRP+ CESIC IAL D+H ++RRAAGE L T+VTMDID+V +  +K  R  RKR  +R+ +GPFNT+LREIPPVERA + IRELL+AI R  D+ VD AL VDAVWD+
Sbjct:    1 MLHKPSSSPGLFTAWMSHVSINGPEAMAAIVSLVISAARPVPFSREQLVTSDMIIANEPQESVRDLCQVLAVDAPEKVVVLAKNTPSRRVRRTYEDFWRRVASETPDIVLYDTDCFETLIPWLESMSGSPIQTLRVSATLAAYGRVDGFIKVGTQLRKQLASIQRQLYTEKRRSGISQRNDSARGAKKRAAQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELSDKVYRSIFIGRYRDTYANVRSMSLSALGGWIMMFPDHVLDETHNKCIGWLLSDKDAVVRKTSLEVLHRMLKKKEYFANFETFLQRFCDRIIDMACDKDDTVAANAIRFLNFLLPHNSNDKLLRPAQCESICDIALEDHHRDVRRAAGELLTTMVTMDIDDVPSSASKRSRVQRKRNGKRAYTGPFNTILREIPPVERAPEGIRELLFAIVRNGDDGVDAAL-VDAVWDY 453          
BLAST of Ggra8374.t1 vs. uniprot
Match: A0A2V3IQR7 (Cohesin subunit SA-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQR7_9FLOR)

HSP 1 Score: 476 bits (1224), Expect = 8.900e-152
Identity = 267/367 (72.75%), Postives = 319/367 (86.92%), Query Frame = 0
Query:  139 ILHRPARAPGLVSAWMNHVSINGPEAMAALVSLVICAARPIPFAHEQLVTPEMIISNDPQESIKEMCQKMAVDAPERVVVLAKDTASRRVRRAYEDFWRRIAAEASEVVLYRTDCFDTLIPWLDAMSTSLIRALRVSACFAAYRLVDGFIEVNTQLRKHLVSIQRQFNTEKRRSGINVRDPNTNSSKGRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELSDRVYRTMFICRYRDISADVRSMSISALGGWIILFPEQFLDDTHNKYIGWLLSDKDASVRKTCLDVLHKMLKKKDYFASFETFLQRFSDRILEMAWDKDDLVAITAIRLLNFLLPHNNNNKLLRPSHCESICAIALGDNHTEI 505
            +LH+P+ +PGLV+AWM+HVSINGPEAMAA++SLVI AARP+PF+ EQLVT +MII+NDPQES++++CQ +AVD PE+VVVLAK+T SRRVRR YEDFWRR+A+EA +VVLY TDCF+TLIPWL++MS S IRALR+SA  AAYRLVDGFIEV TQLRK L SIQRQ NTE+RRSGI+ R+ +T  +K RAA  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXELSD VYR+ FI RY DI A+VRSMS+ ALGGWI++FP+QFLDDTHNKY GWLLSDKDA VRKT L+VLH+MLKKK+YFA+FET+LQRF  RI++MA +KDD VA TAIR +NFLLPHN+ +KLLRP+    IC IAL D+ T++
Sbjct:    1 MLHKPSSSPGLVTAWMSHVSINGPEAMAAIMSLVISAARPVPFSREQLVTLDMIIANDPQESVRDLCQVLAVDEPEKVVVLAKNTPSRRVRRTYEDFWRRVASEAPDVVLYDTDCFETLIPWLESMSGSPIRALRISASLAAYRLVDGFIEVGTQLRKQLASIQRQLNTERRRSGISQRNDSTRVAKKRAAQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELSDGVYRSTFIGRYHDIYANVRSMSLPALGGWIMMFPDQFLDDTHNKYTGWLLSDKDAVVRKTSLEVLHRMLKKKEYFANFETYLQRFCHRIIDMACNKDDTVAATAIRSINFLLPHNSTDKLLRPAQIARICDIALEDHPTDV 367          
BLAST of Ggra8374.t1 vs. uniprot
Match: A0A2V3IWQ0 (Cohesin subunit SA-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWQ0_9FLOR)

HSP 1 Score: 414 bits (1063), Expect = 4.370e-129
Identity = 213/336 (63.39%), Postives = 266/336 (79.17%), Query Frame = 0
Query:  633 ILLASAAEAGGNGDSNRAKIVEKGEYAEPETPSVLLSKQFLPRLPRLLSQFQSDPSAVRALIQLPRHFTMSTFEQQGQDSYFSTLLERVIGVLLKHTGSAEVTAACAETLRYFLSDQNPLKKTACTSLQLCCQRATKDLALQVRAGLSTAEPDNIAALMSQVRVLSELVDSDISTFEAVKEVLLFQENNLGSSEVDTTVTFDAIRVVCAFAVWSLSRIKSRMASTGSSETLLEDTLNLEEMKEYRKHGADVVGILQSICGKGSMPIPVRLLSARCLLIILTLCRGMEKNAMMMIIRGRSDPGN-SMAAPDMDILSLKDSIQGLVEVIRSIVFTLVE 967
            +LLASAAEA  NGD  RA+IVEKGEY++P TP  LLSK FLP LPRLLSQ+QSDP  +  L++LPRHFTM+TFEQQ QD +FS +L+R+IGV++ HTGS EV++ACAETLR FLS+QNPLKK  CTSLQLCCQR +KDLALQ R  LS AEPDN+AALMSQ+R+L+ELVDSD ST+E VK+VL FQE N   S ++  VT DA    CAFAVWSLS+I+SR+ +TGSS+T  E  + LEE++EYR  GADV+ ILQ IC   S+P+ VRL  +RC+LI+LTLCRG+EKN  MMI+R R++  N S A PD+++LSLK++I  LV++ RS+V TL E
Sbjct:    1 MLLASAAEASRNGDPMRARIVEKGEYSDPRTPGTLLSKHFLPLLPRLLSQYQSDPKTISTLVELPRHFTMTTFEQQDQDGHFSAMLDRIIGVMVNHTGSEEVSSACAETLRNFLSEQNPLKKATCTSLQLCCQRVSKDLALQFRTDLSKAEPDNVAALMSQLRILTELVDSDSSTYEVVKDVLEFQERNGDLSGLNDHVTIDASLSACAFAVWSLSKIRSRLITTGSSQTSHEKIMELEELQEYRNQGADVIDILQRICACDSVPLAVRLFCSRCILIVLTLCRGIEKNMSMMILRKRTESDNASPADPDLNLLSLKETIPQLVDMTRSVVTTLFE 336          
BLAST of Ggra8374.t1 vs. uniprot
Match: A0A2V3J680 (Cohesin subunit SA-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J680_9FLOR)

HSP 1 Score: 390 bits (1001), Expect = 2.310e-121
Identity = 190/266 (71.43%), Postives = 229/266 (86.09%), Query Frame = 0
Query:  396 LFPEQFLDDTHNKYIGWLLSDKDASVRKTCLDVLHKMLKKKDYFASFETFLQRFSDRILEMAWDKDDLVAITAIRLLNFLLPHNNNNKLLRPSHCESICAIALGDNHTEIRRAAGEFLATLVTMDIDNVSAPVAKSKRAYRKRGRRRSSSGPFNTLLREIPPVERAKDDIRELLYAIARKEDEPVDEALTVDAVWDHLPALRCWQAFEELLLENPESSSANEDEEALSGAEKGVLCRILLASAAEAGGNGDSNRAKIVEKGEYAEP 661
            +F +QFLDDTHNKYIGWLLSDKDA VRKT L+VLH+MLKKK+YFA+FETFLQRF DRI++MA DKDD VA TAIRLLNFLLPHN+N+KLLRP+ CESIC IAL D+HT++RRAAGEFL T+VTMDID+V +  +K  R  RKR  +R+ +GPFNTLLREIPPVE A++DIR LL+AI RK D+ VD AL VDAVWD+LP+LRCWQAFEELLLE+ +  +A++D EALS +EKGVLC ++LASAAEA GNGD  +A+IVEKGEY++P
Sbjct:    1 MFRDQFLDDTHNKYIGWLLSDKDAVVRKTSLEVLHRMLKKKEYFANFETFLQRFCDRIIDMACDKDDTVAATAIRLLNFLLPHNSNDKLLRPAQCESICDIALEDHHTDVRRAAGEFLTTMVTMDIDDVPSSASKRSRVQRKRNGKRACTGPFNTLLREIPPVEGAREDIRALLFAIVRKGDDGVDAALAVDAVWDYLPSLRCWQAFEELLLEDQQPDTASQDGEALSDSEKGVLCEMILASAAEASGNGDPMQARIVEKGEYSDP 266          
BLAST of Ggra8374.t1 vs. uniprot
Match: A0A2V3IQS1 (Sister-chromatid cohesion protein 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQS1_9FLOR)

HSP 1 Score: 311 bits (798), Expect = 3.640e-93
Identity = 179/259 (69.11%), Postives = 217/259 (83.78%), Query Frame = 0
Query:  143 PARAPGLVSAWMNHVSINGPEAMAALVSLVICAARPIPFAHEQLVTPEMIISNDPQESIKEMCQKMAVDAPERVVVLAKDTASRRVRRAYEDFWRRIAAEASEVVLYRTDCFDTLIPWLDAMSTSLIRALRVSACFAAYRLVDGFIEVNTQLRKHLVSIQRQFNTEKRRSGINVRDPNTNSSKGRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELSDRVYRTMFICRYRDISADVRSMSISALGGWIILFPEQF 401
            P+ +PG V+AWM+H SINGPEAM A++ L I AARP+ F+ EQLVT +MII+N+PQES++++CQ +AVDAPE+VV+L K+T SRRVRR YE+FWR +A+EAS++VLY TDCF+TLIPWL++MS+S IRALRVSA  AAYRLVD FI+V TQLRK L SIQRQ NTEKRRSGI+ R+ +T  +K RAA         XXXXXXXXXXXXXXXXXXXXX ELSDRVYR+ FI RYRDI ADVRSMS+SALGGWI++FP+QF
Sbjct:    2 PSSSPGFVTAWMSHGSINGPEAMTAILFLAISAARPVTFSREQLVTSDMIIANEPQESVRDLCQVLAVDAPEKVVMLEKNTPSRRVRRTYEEFWRHVASEASDIVLYDTDCFETLIPWLESMSSSPIRALRVSASLAAYRLVDWFIKVGTQLRKQLSSIQRQLNTEKRRSGISQRNDSTRVAKKRAAQGKGKKKELXXXXXXXXXXXXXXXXXXXXXTELSDRVYRSTFIGRYRDIHADVRSMSLSALGGWIMMFPDQF 260          
BLAST of Ggra8374.t1 vs. uniprot
Match: A0A2V3IFY1 (Cohesin subunit SA-3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFY1_9FLOR)

HSP 1 Score: 297 bits (761), Expect = 3.340e-88
Identity = 155/254 (61.02%), Postives = 191/254 (75.20%), Query Frame = 0
Query:  139 ILHRPARAPGLVSAWMNHVSINGPEAMAALVSLVICAARPIPFAHEQLVTPEMIISNDPQESIKEMCQKMAVDAPERVVVLAKDTASRRVRRAYEDFWRRIAAEASEVVLYRTDCFDTLIPWLDAMSTSLIRALRVSACFAAYRLVDGFIEVNTQLRKHLVSIQRQFNTEKRRSGINVRDPNTNSSKGRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELSDRVYRTMFICRYRDISADVRSMSISALGG 392
            +LH+P+  PGL +A M+HVSING EAM+A+V LVI AARP+PF+ EQLVT +MII+N+PQES++++CQ +AVDAPE+VVVLAKDT SRRVRR YEDFWRR+AAEA ++VLY TDCF+TLI WL++M +S IRALR+SA FAAYRLVDGFIEV TQLRK L SIQRQ +TEKR SGI+ R+ +   +K R A                               ELSDRVYR++FI R+RDI A+VRSMS+SALGG
Sbjct:    1 MLHKPSSPPGLFTACMSHVSINGLEAMSAIVFLVISAARPVPFSREQLVTSDMIIANEPQESVRDLCQVLAVDAPEKVVVLAKDTPSRRVRRTYEDFWRRVAAEAPDIVLYHTDCFETLILWLESMCSSPIRALRLSASFAAYRLVDGFIEVGTQLRKRLASIQRQLSTEKRDSGISQRNDSARGAKKRPAQGKEKKKELSPKGKALANKVDELNAKNSEITELSDRVYRSIFIDRHRDIYAEVRSMSLSALGG 254          
BLAST of Ggra8374.t1 vs. uniprot
Match: A0A2V3IFW1 (Cohesin subunit SA-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFW1_9FLOR)

HSP 1 Score: 294 bits (752), Expect = 2.150e-87
Identity = 145/221 (65.61%), Postives = 177/221 (80.09%), Query Frame = 0
Query:  424 TCLDVLHKMLKKKDYFASFETFLQRFSDRILEMAWDKDDLVAITAIRLLNFLLPHNNNNKLLRPSHCESICAIALGDNHTEIRRAAGEFLATLVTMDIDNVSAPVAKSKRAYRKRGRRRSSSGPFNTLLREIPPVERAKDDIRELLYAIARKEDEPVDEALTVDAVWDHLPALRCWQAFEELLLENPESSSANEDEEALSGAEKGVLCRILLASAAEAGGN 644
            T L+VLH MLKKK+YFA+FETFLQRF D I++MA DKDD VA TAIRLLNFLLPHN+N++ LRP+ C SIC IA  ++HT++RRAAGEFL  +VTMDID+V +  +K     RKR  RR+S+GPFNT LR IPP++RA++DIRELL+AI RK D+ VD AL VDAVWD LP+LRCW AFEELLLE  +  +A+ D EALS +EKG+ C +LLASAAEA GN
Sbjct:    2 TSLEVLHHMLKKKEYFANFETFLQRFCDHIIDMACDKDDTVAATAIRLLNFLLPHNSNDRFLRPAQCPSICDIAFENHHTDVRRAAGEFLTNMVTMDIDDVPSFASKQSHVQRKRNGRRTSTGPFNTFLRAIPPIQRAREDIRELLFAIVRKGDDRVDAALAVDAVWDSLPSLRCWHAFEELLLEEQQPDTASPDGEALSNSEKGLFCGMLLASAAEASGN 222          
The following BLAST results are available for this feature:
BLAST of Ggra8374.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IGA30.000e+060.88Cohesin subunit SA-1 n=1 Tax=Gracilariopsis chorda... [more]
R7QBF13.930e-21936.61SCD domain-containing protein n=1 Tax=Chondrus cri... [more]
A0A2V3J5C77.860e-20656.17Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IY213.550e-18970.48Cohesin subunit SA-2 n=1 Tax=Gracilariopsis chorda... [more]
A0A2V3IQR78.900e-15272.75Cohesin subunit SA-1 n=1 Tax=Gracilariopsis chorda... [more]
A0A2V3IWQ04.370e-12963.39Cohesin subunit SA-1 n=1 Tax=Gracilariopsis chorda... [more]
A0A2V3J6802.310e-12171.43Cohesin subunit SA-1 n=1 Tax=Gracilariopsis chorda... [more]
A0A2V3IQS13.640e-9369.11Sister-chromatid cohesion protein 3 n=1 Tax=Gracil... [more]
A0A2V3IFY13.340e-8861.02Cohesin subunit SA-3 n=1 Tax=Gracilariopsis chorda... [more]
A0A2V3IFW12.150e-8765.61Cohesin subunit SA-1 n=1 Tax=Gracilariopsis chorda... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 558..578
NoneNo IPR availableCOILSCoilCoilcoord: 335..362
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1412..1427
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1233..1251
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1477..1514
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..139
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1355..1375
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1206..1220
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1299..1319
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1192..1533
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 310..337
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 111..128
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1515..1533
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1320..1354
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1252..1267
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1397..1411
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 916..1533
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..897
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 898..915
IPR013721STAGPFAMPF08514STAGcoord: 220..315
e-value: 1.4E-14
score: 54.0
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 359..585
e-value: 1.8E-12
score: 49.6
IPR039662Cohesin subunit Scc3/SAPANTHERPTHR11199STROMAL ANTIGENcoord: 66..868
IPR020839Stromalin conservative domainPROSITEPS51425SCDcoord: 371..456
score: 27.834599
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 254..764

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:269097..273698 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8374.t1Ggra8374.t1Gracilaria gracilis GNS1m malemRNAtig00000041_pilon 269097..273698 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8374.t1 ID=Ggra8374.t1|Name=Ggra8374.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1534bp
MPTDDGAGSPSGDEQPNDQLPPASPQHMFDDDTDMPGGGGPSADLPADAQ
RPAEGGDDHSAVEHVNPQPDDNHDSHPSNPERNPATSEPDPPAEVPQTET
RAPSQTPAQAATRHDEDEHVDHDHDDTASQTSSTLFEKILHRPARAPGLV
SAWMNHVSINGPEAMAALVSLVICAARPIPFAHEQLVTPEMIISNDPQES
IKEMCQKMAVDAPERVVVLAKDTASRRVRRAYEDFWRRIAAEASEVVLYR
TDCFDTLIPWLDAMSTSLIRALRVSACFAAYRLVDGFIEVNTQLRKHLVS
IQRQFNTEKRRSGINVRDPNTNSSKGRAASSKGRKKELSTKGKELSNKLD
ELTAKNGELTELSDRVYRTMFICRYRDISADVRSMSISALGGWIILFPEQ
FLDDTHNKYIGWLLSDKDASVRKTCLDVLHKMLKKKDYFASFETFLQRFS
DRILEMAWDKDDLVAITAIRLLNFLLPHNNNNKLLRPSHCESICAIALGD
NHTEIRRAAGEFLATLVTMDIDNVSAPVAKSKRAYRKRGRRRSSSGPFNT
LLREIPPVERAKDDIRELLYAIARKEDEPVDEALTVDAVWDHLPALRCWQ
AFEELLLENPESSSANEDEEALSGAEKGVLCRILLASAAEAGGNGDSNRA
KIVEKGEYAEPETPSVLLSKQFLPRLPRLLSQFQSDPSAVRALIQLPRHF
TMSTFEQQGQDSYFSTLLERVIGVLLKHTGSAEVTAACAETLRYFLSDQN
PLKKTACTSLQLCCQRATKDLALQVRAGLSTAEPDNIAALMSQVRVLSEL
VDSDISTFEAVKEVLLFQENNLGSSEVDTTVTFDAIRVVCAFAVWSLSRI
KSRMASTGSSETLLEDTLNLEEMKEYRKHGADVVGILQSICGKGSMPIPV
RLLSARCLLIILTLCRGMEKNAMMMIIRGRSDPGNSMAAPDMDILSLKDS
IQGLVEVIRSIVFTLVESELEQHKSRTPRRSRDASIPNESDRKDFFACLV
QASLQSVLSRSISHLPLFGILLKGEREERGSEANEYTSSRVCRDYLQQRQ
IRRTSLMRDIIRALGEVTGLKCSKEEHQNLIRELAECCVSFRYRRDLKTK
ASAELLQALMDHCSSSTTEPNFVDNLQLLSSASFSVVACISQEDGQKAME
QISAIDELLVKYKDAVNEDLMNSFEICRSSIKAVADGETPDVPSFSKLTD
RPTSNRRVHSRRRRRRLQSPKAHTPPPEPINIRKSSRVRKKVDYARMEIY
ESDENNEDEEPGSEVGEDEVGPSEPTVAEVARDMMEYQNSPVAVRKRASR
EVPSADLSPTKRRKRNPEATTENGAVSPVERNEGRNQSSSNHNNSGATRQ
VSSEEGIGQKDESQYDEEVNAETSEPSKSHTENVGGCDDVEESANQTGKS
KESQRQQLRGASANRKSERETTLGGKQNGRHSRRRAKSGTSNGSLEGAPG
SPKGDNREAVKERKASQTKTRKTRSSRRISNQQSSAKSDSPANPDETPLQ
GKENLQSTLEEGNGKSTSKPEEGVVRRRQQRRW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013721STAG
IPR011989ARM-like
IPR039662Cohesin_Scc3/SA
IPR020839SCD
IPR016024ARM-type_fold