Ggra8367.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8367.t1
Unique NameGgra8367.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length384
Homology
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BLAST of Ggra8367.t1 vs. uniprot
Match: R7QLR3 (BTB domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLR3_CHOCR)

HSP 1 Score: 432 bits (1112), Expect = 5.030e-147
Identity = 226/380 (59.47%), Postives = 298/380 (78.42%), Query Frame = 0 
Query:    1 MAFAQTLLRKMRSDSISDKHFYDIFFVVRSSHRDGTPSETRLGAHRVVLSALSDTFESCCDAVPNQPH----SEIIVTECSAAAVREALQIVYGGEMTDSQNSIVLALEVWHFGVLFNVEYLIQLARSTCLEKLSTENCLRILDFAVGVDDQDVVEQLQNYTADNANFAHVIASPHFNRLSFEVISALPRPGKGECAWPEILTFEKVWFDALIKWLETRLN------KAADTEDTEGAKV-----------DNVPVIRKVLDLVDFTRMKTHELREVSTNAIAVKCPSFSPGLVSVLLTRSEQLESTILERNIDLDVIGQKYQQALCEVDEADRKSRSAAEKLEKVQAAKLSLERRFDDVRRKKSP-NSRAPPPNAARRK 358
            MAFAQTLL+KM SDS+++KH YD++F V+ +  DGT SETRLGAHRVVLSA+SD FE       + P     +EII+  CSAAAVRE+L+I+YGGE+ D++ S++LALE+WHFGVLF+V++LIQLAR++CLE LST+NCLRILDFAV V+D ++V++LQNY ++NANF+HVI SP F RL F+V+S+L RPGKGECAWPEILTFEKVWFDAL+KWL +R++        A  +   GA+            +++ +++K+L L+DFTRMKTHELR+VS N IAV  P+F+  LV+VLLTR+EQLE TILERNIDLDV+GQKYQQALCE DEA+RK+R+A EK +K+QAAK  +E+R++++RR+    +S  P  N+ARRK
Sbjct:   37 MAFAQTLLKKMLSDSLTEKH-YDVYFHVQQTLHDGTLSETRLGAHRVVLSAVSDMFEQ--QLTKSDPSRGVANEIIIRNCSAAAVRESLEIMYGGELRDAKTSVLLALEIWHFGVLFHVDHLIQLARASCLENLSTDNCLRILDFAVHVEDVEIVDKLQNYASENANFSHVITSPDFERLDFKVVSSLVRPGKGECAWPEILTFEKVWFDALVKWLTSRISYQPYKDPPAKEQPLNGAQPQTPSIVRYPTQESIVLVQKILALIDFTRMKTHELRDVSKNEIAVMSPAFAGDLVTVLLTRAEQLEGTILERNIDLDVLGQKYQQALCEHDEAERKARAAIEKTDKLQAAKQLIEKRYEELRRRXXXTSSNGPSMNSARRK 413
The following BLAST results are available for this feature:
BLAST of Ggra8367.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7QLR35.030e-14759.47BTB domain-containing protein n=1 Tax=Chondrus cri... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 308..342
NoneNo IPR availableGENE3D1.25.40.420coord: 133..267
e-value: 3.6E-6
score: 28.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 336..363
NoneNo IPR availablePANTHERPTHR45632LD33804Pcoord: 7..260
NoneNo IPR availableCDDcd14733BACKcoord: 131..184
e-value: 1.43811E-4
score: 37.2553
IPR000210BTB/POZ domainPFAMPF00651BTBcoord: 18..122
e-value: 5.3E-7
score: 29.9
IPR000210BTB/POZ domainPROSITEPS50097BTBcoord: 22..97
score: 11.150643
IPR011333SKP1/BTB/POZ domain superfamilyGENE3D3.30.710.10Potassium Channel Kv1.1; Chain Acoord: 2..132
e-value: 1.1E-10
score: 43.5
IPR011333SKP1/BTB/POZ domain superfamilySUPERFAMILY54695POZ domaincoord: 11..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:247326..248617 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8367.t1Ggra8367.t1Gracilaria gracilis GNS1m malemRNAtig00000041_pilon 247326..248617 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8367.t1 ID=Ggra8367.t1|Name=Ggra8367.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=384bp
MAFAQTLLRKMRSDSISDKHFYDIFFVVRSSHRDGTPSETRLGAHRVVLS
ALSDTFESCCDAVPNQPHSEIIVTECSAAAVREALQIVYGGEMTDSQNSI
VLALEVWHFGVLFNVEYLIQLARSTCLEKLSTENCLRILDFAVGVDDQDV
VEQLQNYTADNANFAHVIASPHFNRLSFEVISALPRPGKGECAWPEILTF
EKVWFDALIKWLETRLNKAADTEDTEGAKVDNVPVIRKVLDLVDFTRMKT
HELREVSTNAIAVKCPSFSPGLVSVLLTRSEQLESTILERNIDLDVIGQK
YQQALCEVDEADRKSRSAAEKLEKVQAAKLSLERRFDDVRRKKSPNSRAP
PPNAARRKPVIRTSSTLLQKFRNRITSKGDQTA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000210BTB/POZ_dom
IPR011333SKP1/BTB/POZ_sf