Ggra8357.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8357.t1
Unique NameGgra8357.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length754
Homology
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BLAST of Ggra8357.t1 vs. uniprot
Match: A0A2V3IV39 (Ankyrin repeat domain-containing protein 50 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV39_9FLOR)

HSP 1 Score: 365 bits (936), Expect = 1.200e-107
Identity = 224/545 (41.10%), Postives = 329/545 (60.37%), Query Frame = 0 
Query:  215 ADPRKLNDIGRSPLSLLGEHSXXXXXXALAIELSQLAANVRTTLQPSRLDSSSSSLNALERLWLEAYTSSITP-DELIAALTCDNIASFSSFIIAHNLLLLSIRHRIIEWHQVRFLRDSRDYLFEQVYLSVTRLQLTDEKKFWLLNILVHAENIGLIHRANPKMPHVLAKLRHEIRHSILQMANVLITVTSQIGHLDERVRARKNCTDEAAKEFVTLCQGQKRKAADMRNMVACLNQLHSSMQKHHKKRIIAAVLDCSLSSVIVIGGAICGAGLATTLAPSGKRVESC-------ISALASVDFGNVRTLGVLTSDDYIKKLDPLVKTRMESVCRFSEFRAPSGFQFKINEIVAEIEENDLDLLALYREELDLQQRFTTLASAAGGDYARAQQAIKELHHMVKMHTKCNADLGEVATSVAERMDETTGQMSFEAFRSAYSDLRKRHAETRTRKVAAMVRERFRSATESENPLMILIAKRLLQELHRESGEKKSRAEGAVSLKRKRNEWDELEVDRLLKEHSLDGNGVLIKEDGFIEVGMKLLFGD 751
            ADPR  ND G   +SL+   S       LA EL  +    R +             NALE+LW+  Y SS+ P +EL+AAL  D I SFSSFI+AHNLLLL++R RII   +VR L  SRDY+  +VYL VT++ LT E+K  +  +L +AE +G I  A      V+A+LR EIR S +Q+   L+TV  +I  +D+RV   +  T +AA+EF   C+GQ++   DM+ M   LN+LHS ++KH + R+IA +L   LS + V+GGAI GA LAT     G   E         + A  SVD  + +++G LTS +++ KLDP+V+ R+++V + S+FR  +  Q ++N ++ ++E  D+DL A   EE++L+QRF  LA+ +  +   AQ+A+KEL H+++   K  A+ G+VA +V   M    G+++F+AF  A+ D++K++   +TRK+   + E F+SA      L+  IAK +L+ L  ES  +       VS +R R EWDE EVDRLL EH +  NG +I+E+GFIEVGMK+LFGD
Sbjct:  685 ADPRAKNDAGEYAVSLVSCDSK------LATELRLVGPQARAS-------------NALEQLWI-TYASSVPPKNELLAALRSDQITSFSSFIMAHNLLLLAVRQRIIRKEEVRLLGGSRDYILHEVYLPVTKVDLTQEQKCLVAKVLSYAEKLGFIRDAT--FVKVVAELRSEIRESNIQLQTALVTVARKINSIDQRVDTLEKWTKQAAEEFRKACEGQQQMVKDMQRMSTSLNELHSLLRKHQRNRMIAGILSSCLSIIPVVGGAIAGATLATCDLGFGITYEQASALGITGLLAFLSVDLSSFQSIGTLTSKEFLSKLDPVVQKRVDTVVKHSKFRTVARLQNEVNVMMNDLEMGDMDLSATDDEEVELRQRFNVLAATSNAETVSAQEAVKELQHILERRLKLQAEAGDVANAVIGHMGNR-GRLNFDAFLMAFCDMKKKYPAPQTRKIPVELSENFQSAAGGSQ-LLKSIAKPVLRALFHESCSEGGSIGSGVSFRRSREEWDESEVDRLLTEHGV--NGAMIEEEGFIEVGMKVLFGD 1203
The following BLAST results are available for this feature:
BLAST of Ggra8357.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IV391.200e-10741.10Ankyrin repeat domain-containing protein 50 n=1 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 90..119
e-value: 1.8
score: 17.6
coord: 157..186
e-value: 0.011
score: 24.9
coord: 123..153
e-value: 0.17
score: 20.9
coord: 22..52
e-value: 4.3
score: 16.3
coord: 56..86
e-value: 1.8
score: 17.5
coord: 190..219
e-value: 2.1E-4
score: 30.6
IPR002110Ankyrin repeatPFAMPF12796Ank_2coord: 34..119
e-value: 2.3E-10
score: 40.9
coord: 128..218
e-value: 4.0E-14
score: 53.0
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 157..189
score: 11.96825
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 56..89
score: 8.8966
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 22..55
score: 9.24383
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 123..156
score: 10.55262
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 90..122
score: 9.1637
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 190..222
score: 11.94154
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 108..242
e-value: 6.6E-34
score: 119.0
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 4..107
e-value: 3.3E-20
score: 74.2
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 5..230
NoneNo IPR availablePANTHERPTHR24189:SF59SI:CH211-203B8.6coord: 92..462
NoneNo IPR availablePANTHERPTHR24189MYOTROPHINcoord: 18..191
NoneNo IPR availablePANTHERPTHR24189MYOTROPHINcoord: 92..462
NoneNo IPR availablePANTHERPTHR24189:SF59SI:CH211-203B8.6coord: 18..191
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 489..753
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..298
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 317..462
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 299..316
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 463..488
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 123..156
score: 9.118069
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 157..189
score: 10.603827
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 190..216
score: 10.895672

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:215506..217767 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8357.t1Ggra8357.t1Gracilaria gracilis GNS1m malemRNAtig00000041_pilon 215506..217767 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8357.t1 ID=Ggra8357.t1|Name=Ggra8357.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=754bp
MNSGSFKVTLQTGLQPKWAKKDGLTPLICEARYNEQAAVVRQLLQGGAKV
DQAHRGHWTPLMQAARTCEHAAVVRQLLLAGAEVDRVDNEGWTALKLAIL
GENNETAEVLLDAGTEVGRRSNDSWTPLMTAVRHNEHTAVVQQLLHAGAQ
VDSAENGGVTSLHLAACNGRAKTVAELLKCGAPVDLRDKNGETALHYAVR
DKHEQVARALAKAGADPRKLNDIGRSPLSLLGEHSLLGEHSALAIELSQL
AANVRTTLQPSRLDSSSSSLNALERLWLEAYTSSITPDELIAALTCDNIA
SFSSFIIAHNLLLLSIRHRIIEWHQVRFLRDSRDYLFEQVYLSVTRLQLT
DEKKFWLLNILVHAENIGLIHRANPKMPHVLAKLRHEIRHSILQMANVLI
TVTSQIGHLDERVRARKNCTDEAAKEFVTLCQGQKRKAADMRNMVACLNQ
LHSSMQKHHKKRIIAAVLDCSLSSVIVIGGAICGAGLATTLAPSGKRVES
CISALASVDFGNVRTLGVLTSDDYIKKLDPLVKTRMESVCRFSEFRAPSG
FQFKINEIVAEIEENDLDLLALYREELDLQQRFTTLASAAGGDYARAQQA
IKELHHMVKMHTKCNADLGEVATSVAERMDETTGQMSFEAFRSAYSDLRK
RHAETRTRKVAAMVRERFRSATESENPLMILIAKRLLQELHRESGEKKSR
AEGAVSLKRKRNEWDELEVDRLLKEHSLDGNGVLIKEDGFIEVGMKLLFG
DER*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf