Ggra8356.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8356.t1
Unique NameGgra8356.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length237
Homology
The following BLAST results are available for this feature:
BLAST of Ggra8356.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 15..30
score: 42.46
coord: 63..77
score: 34.65
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 114..143
e-value: 8.3E-4
score: 28.6
coord: 181..211
e-value: 0.0017
score: 27.6
coord: 80..110
e-value: 0.33
score: 20.0
coord: 14..43
e-value: 2.3E-5
score: 33.8
coord: 147..177
e-value: 0.0047
score: 26.1
coord: 47..76
e-value: 1.0
score: 18.4
IPR002110Ankyrin repeatPFAMPF13637Ank_4coord: 19..68
e-value: 1.5E-8
score: 35.0
IPR002110Ankyrin repeatPFAMPF12796Ank_2coord: 89..179
e-value: 3.9E-14
score: 53.0
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 147..180
score: 10.4992
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 114..146
score: 10.41907
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 80..113
score: 8.789761
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 14..46
score: 12.79626
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 215..236
score: 8.629499
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 181..214
score: 9.88487
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 47..79
score: 10.41907
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 183..236
e-value: 2.6E-13
score: 51.9
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 86..182
e-value: 7.8E-27
score: 95.8
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..85
e-value: 7.6E-26
score: 92.3
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 4..235
NoneNo IPR availablePANTHERPTHR24184:SF11SI:CH211-189E2.2coord: 2..135
coord: 50..236
NoneNo IPR availablePANTHERPTHR24184SI:CH211-189E2.2coord: 2..135
coord: 50..236
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 181..210
score: 9.197662
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 114..145
score: 9.171131
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 47..75
score: 9.356852
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 215..236
score: 8.613973
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 147..180
score: 9.065006
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 14..42
score: 12.381428

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:214731..215441 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8356.t1Ggra8356.t1Gracilaria gracilis GNS1m malemRNAtig00000041_pilon 214731..215441 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8356.t1 ID=Ggra8356.t1|Name=Ggra8356.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=237bp
MLLAGAQLNRTNNDGETALSVAAFNGHVETVKLLLQAGAQVNRSRGDGGT
APILAVRNGHVNTVKALLRAGAQVDQTKKSGSTALMYTACYDSHTTVVQQ
LLRAGAHIDCANIRGYTALMLAALHEHPKTVEVLLKARATVNLANTDGWT
ALIVAARHNQHADVVWHLLHAGAEVDRADNYGWTPLMHAAANNKQATMVR
HVLQAGAQINRTSIRGWTGLMLAVAGGHGDTVKVLL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf