Ggra8347.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8347.t1
Unique NameGgra8347.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length357
Homology
BLAST of Ggra8347.t1 vs. uniprot
Match: A0A2V3IHX3 (Putative rRNA-processing protein EBP2-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHX3_9FLOR)

HSP 1 Score: 295 bits (755), Expect = 5.480e-95
Identity = 179/300 (59.67%), Postives = 204/300 (68.00%), Query Frame = 0
Query:   78 FSTLVGVGDHSHESDDDAPLEAIAVSQLPSDTIKMVVNDEAALEKKLCEISLFTDVAGKKALPFEQSLVVTMPNPQKLSDKLALEDLQREKKFAELTTEAVHLALDKLRKNKIKFRRPGDYFAEMVKTDAQMAKIKTHVLQQKDKIEDAEKRRNNRDIKKSRKKVRGEQLEREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE-FPVDLLDVEQLDSDNRFQKHADIASGKKKAWRPTPRQG---------------------HRSKTPHTNGGVRKPNGKKKRLGKSRRMAKK 355
            F+ LVG+GDHS ESD+DAPLEAIAVS+LPS TI+++ NDEAA+EKKL EI+LF DV GK ALPF +SLV+TMP  QKLSDKLAL+DL+REKKFAELTTEAVH  LDKLR+ KIKFRRP DYFAEMVK+DAQMAKIKT +LQQK+KIE AE RRNNRDI K             XXXXXX                             E FP+DLLDVEQLDS+NRFQ H+D+ASGKKKAWRP+   G                     H  K   T GG++K  GKKKRLGKSRR+A K
Sbjct:   37 FTKLVGIGDHSDESDEDAPLEAIAVSKLPSQTIELMANDEAAMEKKLSEIALFVDVPGKNALPFSESLVLTMPLKQKLSDKLALDDLEREKKFAELTTEAVHTGLDKLREQKIKFRRPDDYFAEMVKSDAQMAKIKTKILQQKEKIEAAETRRNNRDINKXXXXXXXXXXXXXXXXXXXAKEEIATYSRLRKQRLKQREQGGAMEDDDEEFPIDLLDVEQLDSENRFQDHSDVASGKKKAWRPSDAPGEKQGRESIRNKFRTSKQSNGQHGQKMSRTKGGIQKRKGKKKRLGKSRRVASK 336          
BLAST of Ggra8347.t1 vs. uniprot
Match: R7QD80 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QD80_CHOCR)

HSP 1 Score: 223 bits (569), Expect = 2.500e-67
Identity = 144/297 (48.48%), Postives = 185/297 (62.29%), Query Frame = 0
Query:   78 FSTLVGVGDHSHESDDDAPLEAIAVSQLPSDTIKMVVNDEAALEKKLCEISLFTDVAGKK-ALPFEQSLVVTMPNPQKLSDKLALEDLQREKKFAELTTEAVHLALDKLRKNKIKFRRPGDYFAEMVKTDAQMAKIKTHVLQQKDKIEDAEKRRNNRDIKKSRKKVRGEQLEREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE----FPVDLLDVEQLDSDNRFQKHADIASGKKKAW--------RPTPRQGHRSKTPH--------TNGGVRKPNGKKKRLGKSRRMA 353
            F+ LVGVG+HS ESD++  +E +A+S+LP   +  + NDE ALEKKL +I++F     +K    F +SL VTMP    L D LAL+DL+RE++FAEL T AVH+ LD LR  K KFRRP DYFA+MVKTD QM K+K  +L  K++IE AEKRRNNRDI K++KK+R  QL++ XXXXXXXX                           +    FP++LL+VEQLD  N FQ HADI+SGKKKAW        +P P  G R+   +        T  G+RKP G KKR+G+SRR A
Sbjct:   14 FAELVGVGEHSDESDEEGTMEVLALSRLPGQVVSELRNDEPALEKKLADIAIFASANRRKDESRFWESLTVTMPLEGTLPDSLALDDLKREQRFAELATAAVHIGLDNLRGQKKKFRRPTDYFAQMVKTDTQMGKVKAKILHHKERIESAEKRRNNRDIAKNKKKLRSSQLQKXXXXXXXXXEEIQAFSRLRKERLKQRAGAGVTEGDGDVDDDFPIELLNVEQLDDKNTFQSHADISSGKKKAWSGKNDKFNKPKPTNGARAGQGNEVQSGKLGTANGIRKPRGGKKRVGRSRRKA 310          
BLAST of Ggra8347.t1 vs. uniprot
Match: A0A2P6NHJ8 (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NHJ8_9EUKA)

HSP 1 Score: 85.9 bits (211), Expect = 3.090e-15
Identity = 51/112 (45.54%), Postives = 72/112 (64.29%), Query Frame = 0
Query:  135 GKKALPFEQSLVVTMPNPQKLSDKLALEDLQREKKFAELTTEAVHLALDKLRKNKIKFRRPGDYFAEMVKTDAQMAKIKTHVLQQKDKIEDAEKRRNNRDIKKSRKKVRGEQ 246
            G K L +E+SL +    P  + D    +DL+REK+F   T EA   A++ L K+KI FRRP DYFAEM+K+D  M KIK+++L  K  IE +E RR  RD+KK  KK++ ++
Sbjct:   95 GGKDLSWEESLSINTVKPFVIED--VQDDLEREKRFYASTLEATSRAVELLHKHKISFRRPTDYFAEMLKSDETMKKIKSNLLNTKKNIEASEDRRKQRDMKKFGKKLQAQK 204          
BLAST of Ggra8347.t1 vs. uniprot
Match: A0A3L6QRH2 (Uncharacterized protein n=1 Tax=Panicum miliaceum TaxID=4540 RepID=A0A3L6QRH2_PANMI)

HSP 1 Score: 85.5 bits (210), Expect = 1.750e-14
Identity = 62/157 (39.49%), Postives = 87/157 (55.41%), Query Frame = 0
Query:   90 ESDDDAPLEAIAVSQLPSDTIKMVVNDEAALEKKLCEISLFTDVAGKKALPFEQSLVVTMPNPQKLSDKLALEDLQREKKFAELTTEAVHLALDKLRKNKIKFRRPGDYFAEMVKTDAQMAKIKTHVLQQKDKIEDAEKRRNNRDIKKSRKKVRGEQ 246
            +S+DD+  EA A    PSD  K + N EA LEK         D+A  K + +   L +     +K+      +DL RE  F     +    A DKL+  K++F RP DY+AEMVKTDA M KIK  +L +K +IE+AE+R+  RD KK  K+V+ E+
Sbjct:  507 DSEDDSGEEAQAK---PSD--KAIYNKEAILEK-------LEDIAWPKNVDWMHKLTIEHDQGEKVDVN---DDLARELAFYTQALDGTRQAFDKLQSMKVRFLRPADYYAEMVKTDAHMHKIKGRLLSEKRRIEEAEERKKARDAKKIAKEVQAEK 648          
BLAST of Ggra8347.t1 vs. uniprot
Match: A0A8H7BZK1 (rRNA-processing protein and EBNA1-binding protein ebp2 n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BZK1_9FUNG)

HSP 1 Score: 82.4 bits (202), Expect = 6.280e-14
Identity = 56/162 (34.57%), Postives = 95/162 (58.64%), Query Frame = 0
Query:   96 PLEAIAVSQLPSDTIKMV------VNDEAALEKKLCEISLFTDVAGKKALPFEQSLVVTMPNPQKLSDKLALEDLQREKKFAELTTEAVHLALDKLRKNKIKFRRPGDYFAEMVKTDAQMAKIKTHVLQQKDKIEDAEKRRNNRDIKKSRKKVRGE-QLERE 250
            PLE ++ S +  +   +V      +N+EAAL +   ++ L       K LP+ +++ VT   P +++D    +D+ RE  F +   EAVH+A +K+++    F RP DYFAEM+K+D  MAK++  +L +  K++ +E  +  R++KK  KKV+ E QLER+
Sbjct:   75 PLEDLSDSDIDDEDGDLVTEQRITINNEAALTRLAEDLKL-------KDLPWIETMTVTSSKPVEVAD--VHDDMARELAFYQQALEAVHIAREKVKEAGTPFSRPDDYFAEMLKSDEHMAKVRQRLLDEASKVKASEDAKRQRELKKFGKKVQVEKQLERQ 227          
BLAST of Ggra8347.t1 vs. uniprot
Match: A0A4T0FWP9 (Uncharacterized protein n=1 Tax=Wallemia hederae TaxID=1540922 RepID=A0A4T0FWP9_9BASI)

HSP 1 Score: 82.8 bits (203), Expect = 7.390e-14
Identity = 56/140 (40.00%), Postives = 80/140 (57.14%), Query Frame = 0
Query:  109 TIKMVVNDEAALEKKLCEISLFTDVAGKKALPFEQSLVVTMPNPQK-LSDKLALEDLQREKKFAELTTEAVHLALDKLRKNKIKFRRPGDYFAEMVKTDAQMAKIKTHVLQQKDKIEDAEKRRNNRDIKKSRKKVRGEQL 247
            T K+ VN++AA+ + L +  L         LPF ++L VT     K L      +DL RE  F + + EAV  A  ++ K  + F RP D+FAEMVKTD QM KI+  ++ +K  IE +EK R  R++KK  KKV+ E+L
Sbjct:  176 TTKVTVNNKAAITRILNDFKL------SDKLPFIETLAVTSSKSIKDLGAVDVYDDLSRELAFYKQSLEAVEKAKPQILKAGVPFTRPNDFFAEMVKTDVQMEKIRQKMMDEKSNIEASEKARKQRELKKVGKKVQNEKL 309          
BLAST of Ggra8347.t1 vs. uniprot
Match: I4Y634 (Ebp2-domain-containing protein n=3 Tax=Wallemia mellicola TaxID=1708541 RepID=I4Y634_WALMC)

HSP 1 Score: 82.4 bits (202), Expect = 7.690e-14
Identity = 59/144 (40.97%), Postives = 88/144 (61.11%), Query Frame = 0
Query:  111 KMVVNDEAALEKKLCEISLFTDVAGKKALPFEQSLVVTMPNPQKLSDKLALE---DLQREKKFAELTTEAVHLALDKLRKNKIKFRRPGDYFAEMVKTDAQMAKIKTHVLQQKDKIEDAEKRRNNRDIKKSRKKVRGEQ-LERE 250
            K+VVN++AA+ + L  I L         LPF ++L VT    Q ++D  A++   DL RE  F + + +AV+ A  ++ K+   F RP D+FAEMVKTD QM KI+  +L +K  IE +E+ R  R++KK  KKV+ E+ LER+
Sbjct:  139 KVVVNNKAAISRILSNIKL------SDKLPFIETLAVTAN--QSITDYGAVDVYDDLSRELAFYKQSLDAVNKAKPEILKSGTPFTRPTDFFAEMVKTDVQMEKIRQKMLDEKSNIEASERARKQRELKKVGKKVQNEKTLERQ 274          
BLAST of Ggra8347.t1 vs. uniprot
Match: A0A1X2HGW3 (Eukaryotic rRNA processing protein EBP2-domain-containing protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HGW3_SYNRA)

HSP 1 Score: 81.3 bits (199), Expect = 1.710e-13
Identity = 54/144 (37.50%), Postives = 84/144 (58.33%), Query Frame = 0
Query:  108 DTIKMVVNDEAALEKKLCEISLFTDVAGKKALPFEQSLVVTMPNPQKLSDKLALEDLQREKKFAELTTEAVHLALDKLRKNKIKFRRPGDYFAEMVKTDAQMAKIKTHVLQQKDKIEDAEKRRNNRDIKKSRKKVRGE-QLERE 250
            D  + +  D+AA+EK + +I L       K LPF +++ VT   P  + D    +D++RE  F +   EA H+   K+ +  + F RP DYFAEMVK+D  MAK++  +L Q  +I+ +E  +  RD+KK  KKV+ + QLER+
Sbjct:  117 DPNRAMYRDDAAMEKLIEKIRL-------KDLPFIETMTVTSSKPTLVEDPE--DDMKRELAFYQQALEAAHIGRAKIIEAGVPFSRPDDYFAEMVKSDEHMAKVRQRLLNQNARIKASEDAKRQRDLKKFGKKVQVQRQLERQ 251          
BLAST of Ggra8347.t1 vs. uniprot
Match: R9AE93 (Putative rRNA-processing protein ebp2 n=2 Tax=Wallemia ichthyophaga TaxID=245174 RepID=R9AE93_WALI9)

HSP 1 Score: 81.6 bits (200), Expect = 1.750e-13
Identity = 54/140 (38.57%), Postives = 81/140 (57.86%), Query Frame = 0
Query:  109 TIKMVVNDEAALEKKLCEISLFTDVAGKKALPFEQSLVVTMPNPQK-LSDKLALEDLQREKKFAELTTEAVHLALDKLRKNKIKFRRPGDYFAEMVKTDAQMAKIKTHVLQQKDKIEDAEKRRNNRDIKKSRKKVRGEQL 247
            T K+ VN+++A+ + L +  L         LPF ++L VT     K L  +   +DL RE  F + + EAV  A  ++ K  + F RP D+FAEMVKTD QM KI+  ++ +K  IE +EK R  R++KK  KKV+ E++
Sbjct:  170 TTKVTVNNKSAITRILNDFKL------SDKLPFIETLAVTSSKSIKDLGAEDVYDDLSRELAFYKQSLEAVERAKPQVLKAGVPFSRPNDFFAEMVKTDVQMEKIRQKMMDEKSNIEASEKARKQRELKKVGKKVQNEKM 303          
BLAST of Ggra8347.t1 vs. uniprot
Match: A0A197KEU0 (Uncharacterized protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197KEU0_9FUNG)

HSP 1 Score: 78.2 bits (191), Expect = 1.990e-13
Identity = 53/160 (33.12%), Postives = 86/160 (53.75%), Query Frame = 0
Query:   92 DDDAPLEAIAVSQLPSDTIKMVVNDEAALEKKLCEISLFTDVAGKKALPFEQSLVVTMPNPQKLSDKLALEDLQREKKFAELTTEAVHLALDKLRKNKIKFRRPGDYFAEMVKTDAQMAKIKTHVLQQKDKIEDAEKRRNNRDIKKSRKKVRGEQ-LERE 250
            D+D P++ +          ++ +N+E AL++   +I+L T++   +      +  + + +P         +DL RE  F     EA  L  D++RK    F RP DYFAEM+KTD  MAKI+  +L +   IE +E+ +  R++KK  KKV+ E+ LERE
Sbjct:   28 DEDGPMDILTQQ-------RVTINNEPALKRLREQIALPTNIPWSETQSITSTQAINVTDPD--------DDLNREVAFYNQALEAAVLGRDRIRKEGGVFERPSDYFAEMIKTDDHMAKIRQRLLDENASIEASERAKAQRELKKFGKKVQTEKRLERE 172          
The following BLAST results are available for this feature:
BLAST of Ggra8347.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHX35.480e-9559.67Putative rRNA-processing protein EBP2-like n=1 Tax... [more]
R7QD802.500e-6748.48Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2P6NHJ83.090e-1545.54Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
A0A3L6QRH21.750e-1439.49Uncharacterized protein n=1 Tax=Panicum miliaceum ... [more]
A0A8H7BZK16.280e-1434.57rRNA-processing protein and EBNA1-binding protein ... [more]
A0A4T0FWP97.390e-1440.00Uncharacterized protein n=1 Tax=Wallemia hederae T... [more]
I4Y6347.690e-1440.97Ebp2-domain-containing protein n=3 Tax=Wallemia me... [more]
A0A1X2HGW31.710e-1337.50Eukaryotic rRNA processing protein EBP2-domain-con... [more]
R9AE931.750e-1338.57Putative rRNA-processing protein ebp2 n=2 Tax=Wall... [more]
A0A197KEU01.990e-1333.13Uncharacterized protein n=1 Tax=Linnemannia elonga... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 209..229
NoneNo IPR availableCOILSCoilCoilcoord: 235..267
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..97
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 221..356
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 337..356
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 295..315
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 221..278
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 279..293
NoneNo IPR availablePANTHERPTHR13028:SF0RRNA-PROCESSING PROTEIN EBP2-RELATEDcoord: 24..355
IPR008610Eukaryotic rRNA processingPFAMPF05890Ebp2coord: 114..315
e-value: 1.3E-33
score: 116.7
IPR008610Eukaryotic rRNA processingPANTHERPTHR13028RRNA PROCESSING PROTEIN EBNA1-BINDING PROTEIN-RELATEDcoord: 24..355

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:173257..174327 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8347.t1Ggra8347.t1Gracilaria gracilis GNS1m malemRNAtig00000041_pilon 173257..174327 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8347.t1 ID=Ggra8347.t1|Name=Ggra8347.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=357bp
MAKRKRKRAHKSSESTHNEAESIGDAHDDMTNQQPTSAPERPVKDVEMAQ
APVDESPSASDGEEAAVGNASDENTPDFSTLVGVGDHSHESDDDAPLEAI
AVSQLPSDTIKMVVNDEAALEKKLCEISLFTDVAGKKALPFEQSLVVTMP
NPQKLSDKLALEDLQREKKFAELTTEAVHLALDKLRKNKIKFRRPGDYFA
EMVKTDAQMAKIKTHVLQQKDKIEDAEKRRNNRDIKKSRKKVRGEQLERE
QEKKRKAKEEIKTYSRLRKQRLREREQGANDDDDDEFPVDLLDVEQLDSD
NRFQKHADIASGKKKAWRPTPRQGHRSKTPHTNGGVRKPNGKKKRLGKSR
RMAKKS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008610Ebp2