Ggra8343.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8343.t1
Unique NameGgra8343.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length147
Homology
BLAST of Ggra8343.t1 vs. uniprot
Match: A0A2V3IHW4 (3-hydroxyacyl-[acyl-carrier-protein] dehydratase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHW4_9FLOR)

HSP 1 Score: 271 bits (693), Expect = 3.620e-90
Identity = 127/146 (86.99%), Postives = 138/146 (94.52%), Query Frame = 0
Query:    1 MSIEEIMKVLPHRYPFLLIDRVIAYEPGKRAIAIKNVSMNEPFFTGHFPDRPIMPGVLQVEALAQVGGIVMLQQPMSDGKGDFFFGGVDKIKWRKPVLPGDTLVLEMTLGVFKPRFGIAKMTGKGYVNGGLVLEGLFTLVMVVDKK 146
            MSIE+IMKVLPHRYPFLLIDRVIA+EPGKRAIAIKNVS+NEPFF GHFPDRPIMPGVLQVEALAQVGGIVMLQQP+SDGKGDFFFGGVDK+KWRKPVLPGDT+V+EMTL  +K RFGIAKM GKGYV+G LV+EGLFTL M VDK+
Sbjct:  112 MSIEDIMKVLPHRYPFLLIDRVIAFEPGKRAIAIKNVSVNEPFFPGHFPDRPIMPGVLQVEALAQVGGIVMLQQPISDGKGDFFFGGVDKVKWRKPVLPGDTIVMEMTLEAYKKRFGIAKMVGKGYVDGKLVVEGLFTLAMAVDKE 257          
BLAST of Ggra8343.t1 vs. uniprot
Match: R7QD92 (3-hydroxyacyl-[acyl-carrier-protein] dehydratase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QD92_CHOCR)

HSP 1 Score: 259 bits (661), Expect = 4.940e-85
Identity = 120/148 (81.08%), Postives = 136/148 (91.89%), Query Frame = 0
Query:    1 MSIEEIMKVLPHRYPFLLIDRVIAYEPGKRAIAIKNVSMNEPFFTGHFPDRPIMPGVLQVEALAQVGGIVMLQQ---PMSDGKGDFFFGGVDKIKWRKPVLPGDTLVLEMTLGVFKPRFGIAKMTGKGYVNGGLVLEGLFTLVMVVDK 145
            +S+E++MK+LPHRYPFLLIDRV+AYEPGKRA+AIKNVS+NEP FTGHFPDRPIMPGVLQVEALAQ GGIVMLQ    P+ DGKGDFFFGGVD++KWRKPV+PGDTLV+EMTL  FKPRFGIAKMTGK YV+G LV+EG FTLVMVV+K
Sbjct:  129 LSVEQVMKILPHRYPFLLIDRVVAYEPGKRAVAIKNVSINEPHFTGHFPDRPIMPGVLQVEALAQTGGIVMLQHEENPIKDGKGDFFFGGVDRVKWRKPVVPGDTLVMEMTLDSFKPRFGIAKMTGKAYVDGKLVVEGSFTLVMVVNK 276          
BLAST of Ggra8343.t1 vs. uniprot
Match: A0A7S1TL30 (3-hydroxyacyl-[acyl-carrier-protein] dehydratase n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TL30_9RHOD)

HSP 1 Score: 219 bits (559), Expect = 2.170e-70
Identity = 98/141 (69.50%), Postives = 118/141 (83.69%), Query Frame = 0
Query:    5 EIMKVLPHRYPFLLIDRVIAYEPGKRAIAIKNVSMNEPFFTGHFPDRPIMPGVLQVEALAQVGGIVMLQQPMSDGKGDFFFGGVDKIKWRKPVLPGDTLVLEMTLGVFKPRFGIAKMTGKGYVNGGLVLEGLFTLVMVVDK 145
            EIMKVLPHRYPFLL+D+++ + PG+ AI +K+VSMNEP FTGHFPDRPIMPGVL +EA+AQVGGIVMLQ+P++DGKG+FFF GVD +KWRKPV+PGDTLV+ M L  FK RFGI KM+GK YV+G L +EG FT   V  K
Sbjct:   75 EIMKVLPHRYPFLLVDKIVHFVPGEVAIGVKSVSMNEPQFTGHFPDRPIMPGVLMIEAMAQVGGIVMLQEPITDGKGEFFFAGVDNVKWRKPVVPGDTLVMRMDLKAFKKRFGIGKMSGKAYVDGVLAVEGDFTFAYVAPK 215          
BLAST of Ggra8343.t1 vs. uniprot
Match: A0A1X6P9L0 (3-hydroxyacyl-[acyl-carrier-protein] dehydratase n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P9L0_PORUM)

HSP 1 Score: 215 bits (547), Expect = 1.850e-69
Identity = 95/145 (65.52%), Postives = 117/145 (80.69%), Query Frame = 0
Query:    1 MSIEEIMKVLPHRYPFLLIDRVIAYEPGKRAIAIKNVSMNEPFFTGHFPDRPIMPGVLQVEALAQVGGIVMLQQPMSDGKGDFFFGGVDKIKWRKPVLPGDTLVLEMTLGVFKPRFGIAKMTGKGYVNGGLVLEGLFTLVMVVDK 145
            M    IM VLPHRYP LL+D+VIA+ PG+  +A+K ++MNEP FTGHFP RPIMPGVL +EA+AQ GG+VMLQ+PM+DGKGDFFF G+D +KWR+PV+PGD LV+EM L  +K RFGI+KM+GK YV G L +EG FT  MVVDK
Sbjct:    5 MDTVAIMGVLPHRYPILLVDKVIAFTPGESVVAVKCITMNEPQFTGHFPGRPIMPGVLMIEAMAQTGGLVMLQEPMTDGKGDFFFAGLDNVKWRRPVVPGDVLVMEMVLKSYKARFGISKMSGKAYVGGQLAVEGDFTFAMVVDK 149          
BLAST of Ggra8343.t1 vs. uniprot
Match: A0A836C6N5 (3-hydroxyacyl-[acyl-carrier-protein] dehydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6N5_9STRA)

HSP 1 Score: 211 bits (538), Expect = 7.340e-68
Identity = 97/143 (67.83%), Postives = 117/143 (81.82%), Query Frame = 0
Query:    4 EEIMKVLPHRYPFLLIDRVIAYEPGKRAIAIKNVSMNEPFFTGHFPDRPIMPGVLQVEALAQVGGIVMLQQPMSDGKGDFFFGGVDKIKWRKPVLPGDTLVLEMTLGVFKPRFGIAKMTGKGYVNGGLVLEGL-FTLVMVVDK 145
            E I K+LPHRYPF L+D+VI +EPGKRA+ IK ++ NEP FTGHFPDRPIMPGVLQVEA+AQ+GGI+ LQ P+SDGKG FFFGGVD +KWRKPV+PGD LV+E+ L  +K RFGIAKM G+GYV+G L +E   FT  +V DK
Sbjct:   26 EHIAKILPHRYPFALVDKVIYFEPGKRAVGIKCITNNEPQFTGHFPDRPIMPGVLQVEAMAQLGGIIALQAPISDGKGTFFFGGVDGVKWRKPVVPGDVLVMEVELTAWKQRFGIAKMAGRGYVDGKLAVEVKEFTFALVQDK 168          
BLAST of Ggra8343.t1 vs. uniprot
Match: A0A7S3GZN9 (3-hydroxyacyl-[acyl-carrier-protein] dehydratase n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GZN9_9STRA)

HSP 1 Score: 209 bits (531), Expect = 5.950e-67
Identity = 93/142 (65.49%), Postives = 118/142 (83.10%), Query Frame = 0
Query:    6 IMKVLPHRYPFLLIDRVIAYEPGKRAIAIKNVSMNEPFFTGHFPDRPIMPGVLQVEALAQVGGIVMLQQPMSDGKGDFFFGGVDKIKWRKPVLPGDTLVLEMTLGVFKPRFGIAKMTGKGYVNGGLVLE-GLFTLVMVVDKK 146
            I K+LPHRYPFLL+D+V+++EPGKRA+ +KNV+ NEP FTGHFPD PIMPGVL VEA+AQ+GGIV LQ P+SDGKG FFF G+D +K+R+PV+PGDTLV+EM L  +KP++G+AKM GK YVNG L ++   FT  MV +KK
Sbjct:   13 IAKILPHRYPFLLVDKVVSFEPGKRAVGVKNVTANEPQFTGHFPDLPIMPGVLMVEAMAQLGGIVCLQAPISDGKGQFFFAGIDGVKFRRPVVPGDTLVMEMELEKWKPKYGVAKMKGKAYVNGQLAVQVDSFTFAMVPEKK 154          
BLAST of Ggra8343.t1 vs. uniprot
Match: A0A7S0V5B4 (3-hydroxyacyl-[acyl-carrier-protein] dehydratase n=3 Tax=Hemiselmis TaxID=77924 RepID=A0A7S0V5B4_9CRYP)

HSP 1 Score: 209 bits (532), Expect = 3.670e-66
Identity = 91/142 (64.08%), Postives = 115/142 (80.99%), Query Frame = 0
Query:    5 EIMKVLPHRYPFLLIDRVIAYEPGKRAIAIKNVSMNEPFFTGHFPDRPIMPGVLQVEALAQVGGIVMLQQPMSDGKGDFFFGGVDKIKWRKPVLPGDTLVLEMTLGVFKPRFGIAKMTGKGYVNGGLVLEGLFTLVMVVDKK 146
            +I K+LPHRYPFLL+D+V+ Y PG+ A+AIK ++ NEP FTGHFPDRPIMPGVLQ+EA+AQVGGIV LQ PM++   DFFFGGVD +KWR+P++PGD LV+EM +  FK RFGI KM+GKGYV+G + +EG FT  +   KK
Sbjct:   81 DIRKILPHRYPFLLVDKVLEYVPGEMAVAIKCITANEPQFTGHFPDRPIMPGVLQIEAMAQVGGIVALQPPMAEPGQDFFFGGVDNVKWRRPLVPGDVLVMEMRVSAFKKRFGICKMSGKGYVDGNIAVEGDFTFALAKTKK 222          
BLAST of Ggra8343.t1 vs. uniprot
Match: A0A7S4NKT1 (3-hydroxyacyl-[acyl-carrier-protein] dehydratase n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4NKT1_9EUKA)

HSP 1 Score: 209 bits (531), Expect = 5.210e-66
Identity = 91/145 (62.76%), Postives = 114/145 (78.62%), Query Frame = 0
Query:    2 SIEEIMKVLPHRYPFLLIDRVIAYEPGKRAIAIKNVSMNEPFFTGHFPDRPIMPGVLQVEALAQVGGIVMLQQPMSDGKGDFFFGGVDKIKWRKPVLPGDTLVLEMTLGVFKPRFGIAKMTGKGYVNGGLVLEGLFTLVMVVDKK 146
             I  +  +LPHRYPFLL+D+VI + PGK+A+ IK V+ NE FF GHFP RPIMPGVLQ+EA+AQVGGI+ LQ+P++DGKGDFFF GV  +KWR+PV+PGD LV++M L  FKPRFG+ KM G  YV+G  V+EG F   MVV+KK
Sbjct:   80 DILAVKNILPHRYPFLLVDKVIEFVPGKKAVGIKKVTTNEEFFNGHFPQRPIMPGVLQLEAMAQVGGIIALQEPVTDGKGDFFFAGVSNVKWRRPVVPGDNLVMQMELTAFKPRFGLVKMKGVSYVDGQKVVEGDFQFAMVVEKK 224          
BLAST of Ggra8343.t1 vs. uniprot
Match: A0A7S0IKK2 (3-hydroxyacyl-[acyl-carrier-protein] dehydratase n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IKK2_9EUKA)

HSP 1 Score: 206 bits (524), Expect = 1.780e-65
Identity = 91/140 (65.00%), Postives = 113/140 (80.71%), Query Frame = 0
Query:    3 IEEIMKVLPHRYPFLLIDRVIAYEPGKRAIAIKNVSMNEPFFTGHFPDRPIMPGVLQVEALAQVGGIVMLQQPMSDGKGDFFFGGVDKIKWRKPVLPGDTLVLEMTLGVFKPRFGIAKMTGKGYVNGGLVLEGLFTLVMV 142
            IE + ++LPHRYPFLL+D+VI +E GKRA+ +K V+ NE FF GHFP RPIMPGVLQVEA+AQVGGIV LQ+P++DGKGDFFF GV+ +KWR+PV+PGDTLV+EM L  FK +FG+ KM G  YV+G  V+EG F   MV
Sbjct:   46 IERVKEILPHRYPFLLVDKVIEFEAGKRAVGVKKVTANEEFFNGHFPSRPIMPGVLQVEAMAQVGGIVALQEPITDGKGDFFFAGVNNVKWRRPVVPGDTLVMEMVLTAFKAKFGLVKMKGIAYVDGQKVVEGDFQFAMV 185          
BLAST of Ggra8343.t1 vs. uniprot
Match: A0A0G4F2M0 (3-hydroxyacyl-[acyl-carrier-protein] dehydratase n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4F2M0_9ALVE)

HSP 1 Score: 207 bits (526), Expect = 2.110e-65
Identity = 91/133 (68.42%), Postives = 112/133 (84.21%), Query Frame = 0
Query:    2 SIEEIMKVLPHRYPFLLIDRVIAYEPGKRAIAIKNVSMNEPFFTGHFPDRPIMPGVLQVEALAQVGGIVMLQQPMSDGKGDFFFGGVDKIKWRKPVLPGDTLVLEMTLGVFKPRFGIAKMTGKGYVNGGLVLE 134
             IE+I  +LPHRYPFLL+D+VI +EPGKRA+ IKNV+MNEP FTGHFP+R IMPGVLQVEA+AQ+GG+V LQ P+SDG GDFFF GVD ++W++PV+PGDTLV+EM L  +KP+FGIAKM G  YVNG   +E
Sbjct:   70 DIEKIKTILPHRYPFLLVDKVIEFEPGKRAVGIKNVAMNEPQFTGHFPERAIMPGVLQVEAMAQLGGVVCLQDPVSDGTGDFFFAGVDGVRWKRPVVPGDTLVMEMELVSWKPKFGIAKMKGSAYVNGEKAIE 202          
The following BLAST results are available for this feature:
BLAST of Ggra8343.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHW43.620e-9086.993-hydroxyacyl-[acyl-carrier-protein] dehydratase n... [more]
R7QD924.940e-8581.083-hydroxyacyl-[acyl-carrier-protein] dehydratase n... [more]
A0A7S1TL302.170e-7069.503-hydroxyacyl-[acyl-carrier-protein] dehydratase n... [more]
A0A1X6P9L01.850e-6965.523-hydroxyacyl-[acyl-carrier-protein] dehydratase n... [more]
A0A836C6N57.340e-6867.833-hydroxyacyl-[acyl-carrier-protein] dehydratase n... [more]
A0A7S3GZN95.950e-6765.493-hydroxyacyl-[acyl-carrier-protein] dehydratase n... [more]
A0A7S0V5B43.670e-6664.083-hydroxyacyl-[acyl-carrier-protein] dehydratase n... [more]
A0A7S4NKT15.210e-6662.763-hydroxyacyl-[acyl-carrier-protein] dehydratase n... [more]
A0A7S0IKK21.780e-6565.003-hydroxyacyl-[acyl-carrier-protein] dehydratase n... [more]
A0A0G4F2M02.110e-6568.423-hydroxyacyl-[acyl-carrier-protein] dehydratase n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013114Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZPFAMPF07977FabAcoord: 10..134
e-value: 8.6E-33
score: 112.9
IPR013114Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZPANTHERPTHR302723-HYDROXYACYL-[ACYL-CARRIER-PROTEIN] DEHYDRATASEcoord: 1..141
IPR010084Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZTIGRFAMTIGR01750TIGR01750coord: 1..138
e-value: 4.0E-50
score: 167.3
IPR010084Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZHAMAPMF_00406FabZcoord: 1..143
score: 31.532375
NoneNo IPR availableGENE3D3.10.129.10Hotdog Thioesterasecoord: 1..146
e-value: 2.3E-51
score: 175.6
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..124
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 144..146
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 125..143
NoneNo IPR availableCDDcd01288FabZcoord: 10..142
e-value: 2.28243E-63
score: 188.136
IPR029069HotDog domain superfamilySUPERFAMILY54637Thioesterase/thiol ester dehydrase-isomerasecoord: 1..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:166868..167409 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8343.t1Ggra8343.t1Gracilaria gracilis GNS1m malemRNAtig00000041_pilon 166868..167409 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8343.t1 ID=Ggra8343.t1|Name=Ggra8343.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=147bp
MSIEEIMKVLPHRYPFLLIDRVIAYEPGKRAIAIKNVSMNEPFFTGHFPD
RPIMPGVLQVEALAQVGGIVMLQQPMSDGKGDFFFGGVDKIKWRKPVLPG
DTLVLEMTLGVFKPRFGIAKMTGKGYVNGGLVLEGLFTLVMVVDKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013114FabA_FabZ
IPR010084FabZ
IPR029069HotDog_dom_sf