Ggra8339.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8339.t1
Unique NameGgra8339.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length178
Homology
BLAST of Ggra8339.t1 vs. uniprot
Match: A0A2V3II01 (Co-chaperone protein HscB-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II01_9FLOR)

HSP 1 Score: 165 bits (417), Expect = 9.640e-49
Identity = 91/184 (49.46%), Postives = 121/184 (65.76%), Query Frame = 0
Query:    2 ALCTQSAR--------NLFQVLGVSESFVVDDQQLAQRFKQLQHRWHPDRFHNSPPDQQNHARHMSATLNVAYATLRQPHARARHLLRLRASDDAQRQQASHLEGVSLEPTFLGWVMLFREQIADAGADTSTLKALSSQLSERLADCLRRLEAAFEHNRLEEAARYTAELQYYHRMERALHEAS 177
            ALCT +AR        N +Q+LGV+E+F +D  QLA+RFK LQ +WHPD++HNSPP  + HA HMSA LN AYATLR PH RA+HLL++R  + A       L+ V+L P FL WV+ FRE IADA  D + L+ L   +  R+  C   L AAF+H+ L  A  +TA+LQYY RM++ +H+ S
Sbjct:    5 ALCTAAARRATTVANSNFYQLLGVTENFRIDSAQLAERFKSLQRQWHPDKYHNSPPADRQHAAHMSAVLNEAYATLRAPHKRAKHLLQIRTHEAAP----PALDDVTLPPHFLMWVVEFRESIADARHDPARLRDLRDDVFARMKQCESELAAAFDHDDLGAATTHTAKLQYYRRMQQVIHDFS 184          
BLAST of Ggra8339.t1 vs. uniprot
Match: F2BCZ6 (Co-chaperone protein HscB homolog n=2 Tax=Neisseria TaxID=482 RepID=F2BCZ6_9NEIS)

HSP 1 Score: 74.3 bits (181), Expect = 1.630e-13
Identity = 55/148 (37.16%), Postives = 79/148 (53.38%), Query Frame = 0
Query:   12 FQVLGVSESFVVDDQQLAQRFKQLQHRWHPDRFHNSPPDQQNHARHMSATLNVAYATLRQPHARARHLLRLRASDDAQRQQASHLEGVSLEPTFLGWVMLFREQIADAGA--DTSTLKALSSQLSERLADCLRRLEAAFEHNRLEEAA 157
            F +  + E F +D+ +L  R++ L  R+HPDR   +   +Q  A  MSAT+N AY TL+ P  RA +LL+ +  D      A   E  S  P FL   M +RE +A+A A  D + L ALS + +    + LR L+ AF   + EEAA
Sbjct:    5 FDLFQLPEGFALDEAELETRYRALAARFHPDRCAAASAFEQKQAVMMSATVNEAYRTLKNPTDRAAYLLKQQGID------ADAPEHTSFAPEFLMQQMEWRETLAEARAEQDRAALAALSGETAAAQQELLRSLQQAFAARQYEEAA 146          
BLAST of Ggra8339.t1 vs. uniprot
Match: iron-sulfur cluster co-chaperone protein HscB n=1 Tax=Papilio machaon TaxID=76193 RepID=UPI001E664388 (iron-sulfur cluster co-chaperone protein HscB n=1 Tax=Papilio machaon TaxID=76193 RepID=UPI001E664388)

HSP 1 Score: 74.7 bits (182), Expect = 3.100e-13
Identity = 46/155 (29.68%), Postives = 86/155 (55.48%), Query Frame = 0
Query:   12 FQVLGVSESFVVDDQQLAQRFKQLQHRWHPDRFHNSPPDQQNHARHMSATLNVAYATLRQPHARARHLLRLRASDDAQRQQASHLEGVSLEPTFLGWVMLFREQIADAGADTSTLKALSSQLSERLADCLRRLEAAFEHNRLEEAARYTAELQYY 166
            F+++G++ES+ +D+ +LA++FK+LQ   HPD+F N P  +Q  +   S+ +N AY TL +P AR  ++L+LR  +          E   ++  FL  +M   E++  A ++   +K L+ +    + D  ++L  AF    L   A+  ++++YY
Sbjct:   58 FKIMGLNESYDLDEIELAKKFKELQKYLHPDKFANKPEQEQEISEKYSSLVNEAYKTLLEPLARGIYMLKLRGKEIP--------ENTEVDQEFLMMIMEKNEEVESADSEEEIMK-LNKENKTIMKDLQKKLSKAFFDGDLNRVAKLLSQMKYY 203          
BLAST of Ggra8339.t1 vs. uniprot
Match: V9ZVY9 (Co-chaperone protein HscB homolog n=15 Tax=Gammaproteobacteria TaxID=1236 RepID=V9ZVY9_AERHY)

HSP 1 Score: 72.8 bits (177), Expect = 6.680e-13
Identity = 57/172 (33.14%), Postives = 88/172 (51.16%), Query Frame = 0
Query:   10 NLFQVLGVSESFVVDDQQLAQRFKQLQHRWHPDRFHNSPPDQQNHARHMSATLNVAYATLRQPHARARHLLRLRASDDAQRQQASHLEGVSLEPTFLGWVMLFREQIADAGADTSTLKALSS----------QLSERL------------ADCLRRLEAAFEHNRLEEAARY 159
            N F++ G++E F +D +QLA  ++QLQ R+HPDRF  +P  +Q  A   +A +N A+ TL+ P  RA +LL LR +D    QQ         + +FL   + +RE++AD   + S  +A+             L +RL            ADC+R+L+  F    LEE  R+
Sbjct:    2 NHFELFGLAEGFELDTRQLADTYRQLQTRFHPDRFATAPEREQLAAVQRAAQINDAFTTLKSPLRRAEYLLSLRGTDIRGEQQTLQ------DTSFLMQQLEWRERLADLKGNASPERAIEDFRREIRHDHQSLMQRLTDALTAGEDLTAADCVRKLK--FVDKLLEELERF 165          
BLAST of Ggra8339.t1 vs. uniprot
Match: A0A3S4SSA4 (Co-chaperone protein HscB homolog n=1 Tax=Aeromonas encheleia TaxID=73010 RepID=A0A3S4SSA4_9GAMM)

HSP 1 Score: 72.8 bits (177), Expect = 6.680e-13
Identity = 47/142 (33.10%), Postives = 78/142 (54.93%), Query Frame = 0
Query:   10 NLFQVLGVSESFVVDDQQLAQRFKQLQHRWHPDRFHNSPPDQQNHARHMSATLNVAYATLRQPHARARHLLRLRASDDAQRQQASHLEGVSLEPTFLGWVMLFREQIADAGADTSTLKALSS----------QLSERLADCL 141
            N F++ G+++ F +D +QLA+ ++QLQ ++HPDRF  +P  +Q  A   +A +N A+ TL+ P  RA +LL LR +D    QQ         +  FL   + +RE++A+   ++S  +A+             L +RL DCL
Sbjct:    2 NHFELFGLAQGFELDTRQLAETYRQLQTKFHPDRFATAPEREQLAAVQRAAQINDAFTTLKAPLRRAEYLLSLRGTDIRGEQQTLQ------DTAFLMQQLEWRERLAELKGESSPERAIEDFRREIRHDHQSLMQRLTDCL 137          
BLAST of Ggra8339.t1 vs. uniprot
Match: iron-sulfur cluster co-chaperone protein HscB n=1 Tax=Melitaea cinxia TaxID=113334 RepID=UPI001E27320B (iron-sulfur cluster co-chaperone protein HscB n=1 Tax=Melitaea cinxia TaxID=113334 RepID=UPI001E27320B)

HSP 1 Score: 73.6 bits (179), Expect = 8.130e-13
Identity = 47/157 (29.94%), Postives = 86/157 (54.78%), Query Frame = 0
Query:   10 NLFQVLGVSESFVVDDQQLAQRFKQLQHRWHPDRFHNSPPDQQNHARHMSATLNVAYATLRQPHARARHLLRLRASDDAQRQQASHLEGVSLEPTFLGWVMLFREQIADAGADTSTLKALSSQLSERLADCLRRLEAAFEHNRLEEAARYTAELQYY 166
            N F+VLGV ES+ +D+ +L++++K+LQ   HPD++ N   ++Q  +   S+ +N AY TL +P AR  ++L LR  D          E   ++  FL  +M   E++ +A  +   +K L+ ++ E + D  ++L  AF    L++     + ++YY
Sbjct:   54 NYFKVLGVKESYDLDETELSKKYKELQKHLHPDKYGNRDKEEQEISAQYSSLVNDAYKTLLEPLARGIYMLNLRGKDIP--------EDTEIDREFLMQIMEKNEEVENADTEEEIMK-LNKEIKEVIKDLQKQLSNAFFDGDLKKVMYLLSRMKYY 201          
BLAST of Ggra8339.t1 vs. uniprot
Match: T1JFU1 (J domain-containing protein n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1JFU1_STRMM)

HSP 1 Score: 73.9 bits (180), Expect = 1.070e-12
Identity = 52/167 (31.14%), Postives = 86/167 (51.50%), Query Frame = 0
Query:    7 SARNLFQVLGVSESFVVDDQQLAQRFKQLQHRWHPDRFHNSPPDQQNHARHMSATLNVAYATLRQPHARARHLLRLRASDDAQRQQASHLEGVSLEPTFLGWVMLFREQIADAGAD---TSTLKALSSQLSERLADCLRRLEAAFEHNRLEEAARYTAELQYYHRME 170
            S  N FQ+  + E F VD   L  RFK LQ ++HPD+F      +++H+   SA +N AY TL +P  R  ++L LR     +       E V++   FL  +M   E + DA AD   T+ ++ ++S+ +E++   +  L +  +    + A +  AEL+YY  +E
Sbjct:   86 SKMNHFQLFEMEEKFDVDVHALTNRFKNLQRKFHPDKFAGKSRVERDHSALYSAQINKAYQTLLKPLQRGLYILELRGRPLVE-------ESVTMSADFLMEIMEINEALVDADADVESTAKVEEIASKNAEKIDKSIENLSSELKSGNWDAAQKTLAELKYYTNIE 245          
BLAST of Ggra8339.t1 vs. uniprot
Match: A0A656HD21 (Co-chaperone protein HscB homolog n=1 Tax=Thiothrix nivea (strain ATCC 35100 / DSM 5205 / JP2) TaxID=870187 RepID=A0A656HD21_THINJ)

HSP 1 Score: 72.4 bits (176), Expect = 1.100e-12
Identity = 49/140 (35.00%), Postives = 74/140 (52.86%), Query Frame = 0
Query:    9 RNLFQVLGVSESFVVDDQQLAQRFKQLQHRWHPDRFHNSPPDQQNHARHMSATLNVAYATLRQPHARARHLLRLRASDDAQRQQASHLEGVSLEPTFLGWVMLFREQIADAGADTSTLKALSSQLSERLADCLRRLEAAF 148
            R+ F++ G+   F VDD  L +RF++LQ ++HPDRF +    ++  A  ++A LN AYATLRQP  RAR+LL L   +    +       ++ +P FL   M  RE + DA        AL + +   +   +  LEA F
Sbjct:    8 RDYFELFGLPRQFGVDDGALTRRFRELQSQYHPDRFASGSDQERRLAVQITAFLNEAYATLRQPRLRARYLLTLAGVEINDERD------ITSDPAFLMQQMEIREALEDAEQAADPFAALDA-VGADIRHTIGELEAGF 140          
BLAST of Ggra8339.t1 vs. uniprot
Match: co-chaperone HscB n=1 Tax=Aeromonas sp. sif2416 TaxID=2854793 RepID=UPI001C47D21E (co-chaperone HscB n=1 Tax=Aeromonas sp. sif2416 TaxID=2854793 RepID=UPI001C47D21E)

HSP 1 Score: 72.0 bits (175), Expect = 1.310e-12
Identity = 47/142 (33.10%), Postives = 78/142 (54.93%), Query Frame = 0
Query:   10 NLFQVLGVSESFVVDDQQLAQRFKQLQHRWHPDRFHNSPPDQQNHARHMSATLNVAYATLRQPHARARHLLRLRASDDAQRQQASHLEGVSLEPTFLGWVMLFREQIADAGADTSTLKALSS----------QLSERLADCL 141
            N F++ G+++ F +D +QLA+ ++QLQ ++HPDRF  +P  +Q  A   +A +N A+ TL+ P  RA +LL LR +D    QQ         +  FL   + +RE++A+   ++S  +A+             L +RL DCL
Sbjct:    2 NHFELFGLAQGFELDIRQLAETYRQLQTKFHPDRFATAPEREQLAAVQRAAQINDAFTTLKAPLRRAEYLLSLRGTDIRGEQQTLQ------DTAFLMQQLEWRERLAELKGESSPERAIEDFRREIRHDHQSLMQRLTDCL 137          
BLAST of Ggra8339.t1 vs. uniprot
Match: iron-sulfur cluster co-chaperone protein HscB n=1 Tax=Aphantopus hyperantus TaxID=2795564 RepID=UPI001568953C (iron-sulfur cluster co-chaperone protein HscB n=1 Tax=Aphantopus hyperantus TaxID=2795564 RepID=UPI001568953C)

HSP 1 Score: 71.6 bits (174), Expect = 4.540e-12
Identity = 45/159 (28.30%), Postives = 87/159 (54.72%), Query Frame = 0
Query:    8 ARNLFQVLGVSESFVVDDQQLAQRFKQLQHRWHPDRFHNSPPDQQNHARHMSATLNVAYATLRQPHARARHLLRLRASDDAQRQQASHLEGVSLEPTFLGWVMLFREQIADAGADTSTLKALSSQLSERLADCLRRLEAAFEHNRLEEAARYTAELQYY 166
            ++N F++LGV E++ +D+ +LA+++K LQ   HPD++ N   ++Q+ +   S+ +N AY TL +P AR  ++LRLR  +  +  +A        +  FL  +M   E++ +A  +   +K L+ +    + D  ++L  AF    L+   +    ++YY
Sbjct:   56 SKNFFRILGVKETYDLDETELAKKYKDLQKNLHPDKYANRNKEEQDISAQYSSMVNDAYKTLLEPLARGIYMLRLRGKEIPENTEA--------DQEFLMKIMEKNEEVEEANTEEEIMK-LNRENKAIIQDLQKKLSRAFFDGDLKRVTKLLTYMKYY 205          
The following BLAST results are available for this feature:
BLAST of Ggra8339.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3II019.640e-4949.46Co-chaperone protein HscB-like n=1 Tax=Gracilariop... [more]
F2BCZ61.630e-1337.16Co-chaperone protein HscB homolog n=2 Tax=Neisseri... [more]
iron-sulfur cluster co-chaperone protein HscB n=1 Tax=Papilio machaon TaxID=76193 RepID=UPI001E6643883.100e-1329.68iron-sulfur cluster co-chaperone protein HscB n=1 ... [more]
V9ZVY96.680e-1333.14Co-chaperone protein HscB homolog n=15 Tax=Gammapr... [more]
A0A3S4SSA46.680e-1333.10Co-chaperone protein HscB homolog n=1 Tax=Aeromona... [more]
iron-sulfur cluster co-chaperone protein HscB n=1 Tax=Melitaea cinxia TaxID=113334 RepID=UPI001E27320B8.130e-1329.94iron-sulfur cluster co-chaperone protein HscB n=1 ... [more]
T1JFU11.070e-1231.14J domain-containing protein n=1 Tax=Strigamia mari... [more]
A0A656HD211.100e-1235.00Co-chaperone protein HscB homolog n=1 Tax=Thiothri... [more]
co-chaperone HscB n=1 Tax=Aeromonas sp. sif2416 TaxID=2854793 RepID=UPI001C47D21E1.310e-1233.10co-chaperone HscB n=1 Tax=Aeromonas sp. sif2416 Ta... [more]
iron-sulfur cluster co-chaperone protein HscB n=1 Tax=Aphantopus hyperantus TaxID=2795564 RepID=UPI001568953C4.540e-1228.30iron-sulfur cluster co-chaperone protein HscB n=1 ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001623DnaJ domainSMARTSM00271dnaj_3coord: 9..74
e-value: 7.7E-8
score: 42.0
IPR001623DnaJ domainPFAMPF00226DnaJcoord: 10..77
e-value: 2.4E-7
score: 30.7
IPR001623DnaJ domainPROSITEPS50076DNAJ_2coord: 10..90
score: 10.498569
IPR001623DnaJ domainCDDcd06257DnaJcoord: 10..69
e-value: 2.14987E-6
score: 41.3769
IPR009073Co-chaperone HscB, C-terminal oligomerisation domainPFAMPF07743HSCB_Ccoord: 102..173
e-value: 4.3E-14
score: 52.7
IPR004640Co-chaperone Hsc20TIGRFAMTIGR00714TIGR00714coord: 21..175
e-value: 1.3E-22
score: 78.6
IPR004640Co-chaperone Hsc20PANTHERPTHR14021IRON-SULFUR CLUSTER CO-CHAPERONE PROTEIN HSCBcoord: 6..175
IPR036386HscB, C-terminal domain superfamilyGENE3D1.20.1280.20coord: 98..177
e-value: 3.5E-15
score: 57.8
IPR036386HscB, C-terminal domain superfamilySUPERFAMILY47144HSC20 (HSCB), C-terminal oligomerisation domaincoord: 94..175
IPR036869Chaperone J-domain superfamilyGENE3D1.10.287.110DnaJ domaincoord: 2..81
e-value: 6.4E-21
score: 76.9
IPR036869Chaperone J-domain superfamilySUPERFAMILY46565Chaperone J-domaincoord: 10..81
NoneNo IPR availablePANTHERPTHR14021:SF15IRON-SULFUR CLUSTER CO-CHAPERONE PROTEIN HSCBcoord: 6..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:161613..162146 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8339.t1Ggra8339.t1Gracilaria gracilis GNS1m malemRNAtig00000041_pilon 161613..162146 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8339.t1 ID=Ggra8339.t1|Name=Ggra8339.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=178bp
MALCTQSARNLFQVLGVSESFVVDDQQLAQRFKQLQHRWHPDRFHNSPPD
QQNHARHMSATLNVAYATLRQPHARARHLLRLRASDDAQRQQASHLEGVS
LEPTFLGWVMLFREQIADAGADTSTLKALSSQLSERLADCLRRLEAAFEH
NRLEEAARYTAELQYYHRMERALHEAS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001623DnaJ_domain
IPR009073HscB_oligo_C
IPR004640HscB
IPR036386HscB_C_sf
IPR036869J_dom_sf