Ggra8338.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8338.t1
Unique NameGgra8338.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length443
Homology
BLAST of Ggra8338.t1 vs. uniprot
Match: A0A2V3IHT3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHT3_9FLOR)

HSP 1 Score: 353 bits (905), Expect = 8.860e-115
Identity = 244/481 (50.73%), Postives = 285/481 (59.25%), Query Frame = 0
Query:    1 MADWPQSLKPIGKYLARAKEVHKTNPLVSYYCRYYSLLRAIELRDTTDSTANLFVTSLLEKCEVEKNTIGFDDGTHRTQVEEYALKQFYIADEQDRSGNATRQTATTFYAAMCFLEVCTVFGALPDDLEEKLRYAKWKAADIIKALREGRRPIPGAPGEAQAQE---AIEPXXXXXXXXXXXXXDTNRSLAPMNHTPSPPIVD-------QPPRKPLYPGAQRLSPVPPAPPVREYDSQPNEYEPSAPPPMPYAPDLPXXXXXXXXXXXXXXXXXXXXXXXALAPSLPPEAXXYPSSEEVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------PSLMLPDDEPKQNVSRTHATYRRAAPISRPPQKLSREANGEKKLFVRAELGVPKRPLPKTPASPVTT----------VHAAQVDM-------KPYKPSVQQTQEAQRLCKYAASALDFEDMKTAVSNLERALQLLKG 440
            MADWP SLKPIGKYLARAKEV   NPLVSYYCRYYSLLRAIELRDT+D+ AN FVT+LLEKCE EK  IG+DDG+HR QVEE+AL+QFY ADEQDR+GNATR TATTFYA+MCFLEVC+VFG+LP DLEEKLRYAKWKAADIIKALREGR+P PGAPGEA+++    A +  XXXXXXXXXXXX            P  P  D       Q   +  YP     +PVPPAPP+R+YDS  + Y        PY   L                             LP  A  YP+SEE S  XXXXXXX                                  PSL LP  E  Q   +  A YR  A ++   ++++    G  +   RAEL VP+RP P TP +   T          V + +V M       K YKP ++ TQEAQRLC+YA+SALDF+D KTAV+NLERAL+LL G
Sbjct:    1 MADWPPSLKPIGKYLARAKEVQNVNPLVSYYCRYYSLLRAIELRDTSDNKANNFVTNLLEKCEAEKTAIGYDDGSHRGQVEEFALEQFYKADEQDRAGNATRATATTFYASMCFLEVCSVFGSLPADLEEKLRYAKWKAADIIKALREGRKPEPGAPGEAESERQRLAEQQQXXXXXXXXXXXXXXXXXXXXXXXXPEQPNQDEERATNLQTAEQLFYPRTAADAPVPPAPPMRDYDS--DAYN------QPYPAHLASGYK-----------------------GLPDVAPPYPTSEEPSPLXXXXXXXPLYPSFPTASTPTDPYATREEQKPSTPEVAAPPIPSLALPGQE-AQRFPKRIAAYRAPANVANAAREINNAPIGAVRRERRAELTVPQRPAPTTPGTASGTPVEVRATGVEVQSREVSMTREVKVKKAYKPRIEDTQEAQRLCRYASSALDFQDFKTAVANLERALKLLTG 449          
BLAST of Ggra8338.t1 vs. uniprot
Match: R7QCA9 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCA9_CHOCR)

HSP 1 Score: 229 bits (583), Expect = 7.290e-67
Identity = 169/465 (36.34%), Postives = 217/465 (46.67%), Query Frame = 0
Query:   15 LARAKEVHKTNPLVSYYCRYYSLLRAIELRDTTDSTANLFVTSLLEKCEVEKNTIG-FDDGTHRTQVEEYALKQFYIADEQDRSGNATRQTATTFYAAMCFLEVCTVFGALPDDLEEKLRYAKWKAADIIKALREGRRPIPGAPGEAQAQEAIEPXXXXXXXXXXXXXDTNRSLAPMNHTPSPPIVDQPPRKPLYPGAQRLSPVPPAPPVREYDSQPNEYEPSAPPPMPYAPDLPXXXXXXXXXXXXXXXXXXXXXXXALAPSLPPEAXXYPSSEEVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSLMLPDDE-PKQNVSRTHATYRRAAPI--SRPPQKLSREA---------------NGEKKLFVRAELGVPKRPLPKT-PASPVTTVHAAQVDMKP-------------------YKPSVQQTQEAQRLCKYAASALDFEDMKTAVSNLERALQLLKG 440
            +ARA+E+    P+V+YYC Y+SL +AIELRD  D++AN FVT LLEKCE  K+ +   D  +HR  V E+AL  F  AD  DR+  AT+ TA TFYAAMCFLEVC+VFG L  +L+E+LRYAKWKAADI KAL+EGR+P+PGAPGEA+A+E  E              +   + A M  TP P I ++      +  AQ  S VPPAPPV EY+S      P + P   + P  P                         APS  P     P                                   PS+ +P  E P+ +   + + Y     I  S PP K                                  P +P P   P+ P                                ++PS++QTQEAQRL KYAASALDF+D+KTAV N+ERAL LL+G
Sbjct:    1 MARAREIEAVQPVVAYYCNYHSLTKAIELRDAADTSANRFVTGLLEKCETAKSALPPGDKDSHRAAVIEFALTVFDRADTDDRNELATKDTALTFYAAMCFLEVCSVFGPLSPELDERLRYAKWKAADITKALKEGRKPMPGAPGEAEAREKAE-------------REKAAAEAEMGPTPPPEIQER-----AFQPAQDTSGVPPAPPVYEYESPAEPLYPQSKPHTDFPPVAPKYPSSD-------------------APSPLPAIRKTPPQAPALDLNTVKGPRSLDIGGLPPPSLDIAAVPNVPSMNIPTTEQPEVSAFSSPSFYESIKQIESSLPPGKEQTRGMPVXXXXXXXXXXXXXXXXXXXXXXXXXXPPKPAPAPMPSKPAVXXXXXXXXXXXXXXXXXXXXXXXXXXXDPNFRPSIKQTQEAQRLAKYAASALDFQDVKTAVQNMERALGLLRG 428          
BLAST of Ggra8338.t1 vs. uniprot
Match: M2XX74 (Vacuolar protein sorting-associated protein VTA1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XX74_GALSU)

HSP 1 Score: 167 bits (423), Expect = 8.880e-45
Identity = 82/166 (49.40%), Postives = 112/166 (67.47%), Query Frame = 0
Query:    2 ADWPQSLKPIGKYLARAKEVHKTNPLVSYYCRYYSLLRAIELRDTTDSTANLFVTSLLEKCEVEKNTIGFDDGTHRTQVEEYALKQFYIADEQDRSGNATRQTATTFYAAMCFLEVCTVFGALPDDLEEKLRYAKWKAADIIKALREGRRPIPGAPGEAQAQEAIE 167
            A WP SLKP+ KYL RAKEV + +PLV+Y CR+Y+    ++LRD  D  A+ F+ SL+EKCE +K  +G D    +  +EE+ALK F  AD +DR+GNATR T  TFYAA+CFLEV    G   +D+ +K++Y K+K A I K LREG +P+PG P ++Q +   E
Sbjct:    3 ASWPTSLKPLAKYLVRAKEVEQIDPLVAYACRFYACEFGLKLRDKKDPDASKFMKSLIEKCEQDKAKLG-DTTLLKEHLEEFALKVFLRADTEDRNGNATRTTVRTFYAALCFLEVLNSLGEPSEDIRQKMKYCKFKVAYISKCLREGIQPVPGPP-DSQTESKYE 166          
BLAST of Ggra8338.t1 vs. uniprot
Match: A0A8H7S9Y5 (Uncharacterized protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7S9Y5_9FUNG)

HSP 1 Score: 147 bits (371), Expect = 9.860e-37
Identity = 74/168 (44.05%), Postives = 108/168 (64.29%), Query Frame = 0
Query:    3 DWPQSLKPIGKYLARAKEVHKTNPLVSYYCRYYSLLRAIELRDTTDSTANLFVTSLLEKCEVEKNTIGFD------DGTHRTQVEEYALKQFYIADEQDRSGNATRQTATTFYAAMCFLEVCTVFGALPDDLEEKLRYAKWKAADIIKALREGRRPIPGAPGEAQAQE 164
            D P  LK I  Y+ R +E+ + +P++SYY +YY++  AI  +  ++   N +++ LL+K E  K T+G +      D      +E +ALK F  AD +DR+G A+++TA TF AA  FLE+   FG L  ++E K++Y+KWKAADI+KALREGR P PGAPGE Q +E
Sbjct:    2 DIPTELKYIAPYIQRGQELSERDPIISYYAQYYAVKMAIS-KGPSNKETNAYLSQLLDKLEQVKGTLGANNEAITNDLVGYAHIENFALKVFLNADNEDRAGKASKKTAKTFLAASIFLELLKTFGDLDPEVEGKIKYSKWKAADIMKALREGRTPTPGAPGENQEEE 168          
BLAST of Ggra8338.t1 vs. uniprot
Match: A0A4P9XB80 (Vta1 domain-containing protein (Fragment) n=1 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4P9XB80_9FUNG)

HSP 1 Score: 139 bits (350), Expect = 8.280e-36
Identity = 71/157 (45.22%), Postives = 99/157 (63.06%), Query Frame = 0
Query:    5 PQSLKPIGKYLARAKEVHKTNPLVSYYCRYYSLLRAIELRDTTDSTANLFVTSLLEKCEVEKNTIGFD------DGTHRTQVEEYALKQFYIADEQDRSGNATRQTATTFYAAMCFLEVCTVFGALPDDLEEKLRYAKWKAADIIKALREGRRPIPG 155
            P  L+ IG +L RA+E+    P+++YYC YY+L  A+EL+  T   A  ++ +L++  EV+K  +  D      D      VE +AL+ F  AD +DR+G A+R+TA  F AA  FLE+  VF  L D+  EK+RYAKWKAADI KAL+EGR P+PG
Sbjct:   12 PPELRAIGPFLQRAQELKDREPVINYYCIYYALKLALELKLRTPD-AQQYLLNLMDHLEVQKKALAADKEAVANDLVGYAHVENFALRIFMAADNEDRAGRASRKTAKAFLAASIFLEILRVFKELDDETTEKIRYAKWKAADIAKALKEGRAPVPG 167          
BLAST of Ggra8338.t1 vs. uniprot
Match: A0A8H7VZI7 (Uncharacterized protein n=1 Tax=Thamnidium elegans TaxID=101142 RepID=A0A8H7VZI7_9FUNG)

HSP 1 Score: 143 bits (361), Expect = 9.650e-36
Identity = 78/162 (48.15%), Postives = 101/162 (62.35%), Query Frame = 0
Query:    3 DWPQSLKPIGKYLARAKEVHKTNPLVSYYCRYYSLLRAIELRDTTDSTANLFVTSLLEKCEVEKNTIG-----FDDGTHRTQVEEYALKQFYIADEQDRSGNATRQTATTFYAAMCFLEVCTVFGALPDDLEEKLRYAKWKAADIIKALREGRRPIPGAPGE 159
            D P  LK I  Y+ R +E+   +P+VSYY +YY+   AI  R       N ++T LL+  E +K TIG      DD      VE +ALK F  AD +DRSG A+++TA TF AA  FLE+   FG L  ++E K++Y+KWKAADI+KALREGR P PGAPGE
Sbjct:    5 DIPADLKYITPYVQRGQELMTRDPVVSYYAQYYAAKLAIA-RGPRSKETNEYLTHLLDGLENQKKTIGENEAITDDLVGYAHVENFALKIFLNADNEDRSGKASKKTAKTFLAASIFLELLKTFGDLDPEVEAKIKYSKWKAADIMKALREGRAPTPGAPGE 165          
BLAST of Ggra8338.t1 vs. uniprot
Match: A0A1X6PAK3 (Vta1 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PAK3_PORUM)

HSP 1 Score: 139 bits (351), Expect = 3.390e-35
Identity = 71/163 (43.56%), Postives = 93/163 (57.06%), Query Frame = 0
Query:    2 ADWPQSLKPIGKYLARAKEVHKTNPLVSYYCRYYSLLRAIELRDTTDSTANLFVTSLLEKCEVEKNTIGF---DDGTHRTQVEEYALKQFYIADEQDRSGNATRQTATTFYAAMCFLEVCTVFGALPDDLEEKLRYAKWKAADIIKALREGRRPIPGAPGEAQ 161
            A WP  L PIG+Y+ARA E+ +  P+V+YYC  Y+L   +ELRDT+   A   + +LL         +     D   +   V+ +A   F  AD +DR   + R TA  FYAA+CF EVC  FG LP  L E+L YA+WK ADI KA+REGR P  G P + Q
Sbjct:    4 AAWPPCLAPIGRYIARAAEIKEVQPVVAYYCHLYALQLGLELRDTSSPAATTALNALLSTISELNKPLKIAPGDAAANAPVVQGFASAVFDAADAEDRGRGSDRGTARAFYAAVCFFEVCGYFGELPAALAERLAYARWKVADISKAVREGRVPRKGGPADWQ 166          
BLAST of Ggra8338.t1 vs. uniprot
Match: A0A8H7R2Q5 (Uncharacterized protein n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7R2Q5_9FUNG)

HSP 1 Score: 141 bits (356), Expect = 3.700e-35
Identity = 77/169 (45.56%), Postives = 104/169 (61.54%), Query Frame = 0
Query:    3 DWPQSLKPIGKYLARAKEVHKTNPLVSYYCRYYSLLRAIELRDTTDSTANLFVTSLLEKCEVEKNTIG-----FDDGTHRTQVEEYALKQFYIADEQDRSGNATRQTATTFYAAMCFLEVCTVFGALPDDLEEKLRYAKWKAADIIKALREGRRPIPGAPGEAQAQEAI 166
            D P  LK I  Y+ R +E+   +P+VSYY +YY+   AI     T  T N +++ LL+  E +K  IG      DD      VE +ALK F  AD +DRSG ++++TA TF AA  FLE+   FG L  ++E K++Y+KWKAADI+KALREGR P PG+PGE +  E I
Sbjct:    2 DIPVELKYITPYVQRGQELATRDPVVSYYAQYYAAKLAIARGPRTKET-NEYLSHLLDALETQKKIIGENEAITDDLVGYAHVENFALKIFLNADNEDRSGKSSKKTAKTFLAASIFLELLKTFGDLDPEVEAKIKYSKWKAADIMKALREGRVPTPGSPGEEEQSENI 169          
BLAST of Ggra8338.t1 vs. uniprot
Match: A0A7J7H7S1 (Uncharacterized protein n=2 Tax=Camellia sinensis TaxID=4442 RepID=A0A7J7H7S1_CAMSI)

HSP 1 Score: 145 bits (365), Expect = 3.980e-35
Identity = 85/205 (41.46%), Postives = 116/205 (56.59%), Query Frame = 0
Query:    1 MADWPQSLKPIGKYLARAKEVHKTNPLVSYYCRYYSLLRAIEL-RDTTDSTANLFVTSLLEKCEVEKNTI--GFDDGTHRTQVEEYALKQFYIADEQDRSGNATRQTATTFYAAMCFLEVCTVFGALPDDLEEKLRYAKWKAADIIKALREGRRPIPGAPGEAQAQEAIEPXXXXXXXXXXXXXDTNRSLAPM-NHTPSPPIVDQ 201
            MA+  +  K +  YL RA E+ K  PLV+YYCR Y++ R +++ +     T N  + SL+ + E +K T+  G DD  H   +E +AL  F  AD+QDR+G A   TA TFYAA  F E+ T FG LP DLE+K +YA WKAADI KA++EGR+P+PG PG     +   P              T+R + P   H PSP   D+
Sbjct:    1 MANDNEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQSERTKTTNSLLISLMNQLEKDKKTVKLGPDDHLH---LEGFALNVFAKADKQDRAGRADLNTAKTFYAASIFFEILTQFGELPPDLEQKQKYAVWKAADIRKAMKEGRKPVPGPPGGDD--DLSLPSGTSSGEYDLEPSRTDRGINPAPEHDPSPQFYDE 200          
BLAST of Ggra8338.t1 vs. uniprot
Match: A0A4S4KHG0 (Uncharacterized protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A4S4KHG0_9APHY)

HSP 1 Score: 143 bits (360), Expect = 5.010e-35
Identity = 81/167 (48.50%), Postives = 100/167 (59.88%), Query Frame = 0
Query:    5 PQSLKPIGKYLARAKEVHKTNPLVSYYCRYYSLLRAIELRDTTDSTANLFVTSLLEKCEVEKNTIGF-----DDGTHRTQVEEYALKQFYIADEQDRSGNATRQTATTFYAAMCFLEVCTVFGALPD-------DLEEKLRYAKWKAADIIKALREGRRPIPGAPGE 159
            PQ LKPI  YL RA+EV   +P+V+Y+C YY+    I L+   + TA  F+  LL   E  K+ IG      D+      VE +ALK F +AD +DR GNATR TA  F AA  FLEV +VF            ++ EK+RYAKWKAADI KA REGR+P PGAPGE
Sbjct:    9 PQELKPIASYLQRAEEVKAKDPVVAYWCAYYAAQVGIGLK-AKEHTARTFLFDLLGVLETMKSDIGSSDAIEDEAVSCAYVENFALKVFAMADNEDRRGNATRATAKKFLAAANFLEVLSVFDQSSSSAVTTTINVPEKIRYAKWKAADIAKAFREGRKPTPGAPGE 174          
The following BLAST results are available for this feature:
BLAST of Ggra8338.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHT38.860e-11550.73Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QCA97.290e-6736.34Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
M2XX748.880e-4549.40Vacuolar protein sorting-associated protein VTA1 n... [more]
A0A8H7S9Y59.860e-3744.05Uncharacterized protein n=1 Tax=Mucor circinatus T... [more]
A0A4P9XB808.280e-3645.22Vta1 domain-containing protein (Fragment) n=1 Tax=... [more]
A0A8H7VZI79.650e-3648.15Uncharacterized protein n=1 Tax=Thamnidium elegans... [more]
A0A1X6PAK33.390e-3543.56Vta1 domain-containing protein n=1 Tax=Porphyra um... [more]
A0A8H7R2Q53.700e-3545.56Uncharacterized protein n=1 Tax=Mucor saturninus T... [more]
A0A7J7H7S13.980e-3541.46Uncharacterized protein n=2 Tax=Camellia sinensis ... [more]
A0A4S4KHG05.010e-3548.50Uncharacterized protein n=1 Tax=Hermanssonia centr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 421..441
NoneNo IPR availableGENE3D1.20.5.420Immunoglobulin FC, subunit Ccoord: 401..439
e-value: 3.4E-15
score: 57.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..362
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 233..290
IPR041212Vta1, C-terminalPFAMPF18097Vta1_Ccoord: 403..438
e-value: 1.3E-15
score: 56.6
IPR023175Vta1/Callose synthase, N-terminal domain superfamilyGENE3D1.25.40.270coord: 1..152
e-value: 8.9E-46
score: 157.6
IPR039431Vta1/callose synthase, N-terminalPFAMPF04652Vta1coord: 11..148
e-value: 4.3E-37
score: 127.3
IPR044538Vacuolar protein sorting-associated protein Vta1-likePANTHERPTHR46009VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOGcoord: 3..440

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:160228..161556 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8338.t1Ggra8338.t1Gracilaria gracilis GNS1m malemRNAtig00000041_pilon 160228..161556 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8338.t1 ID=Ggra8338.t1|Name=Ggra8338.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=443bp
MADWPQSLKPIGKYLARAKEVHKTNPLVSYYCRYYSLLRAIELRDTTDST
ANLFVTSLLEKCEVEKNTIGFDDGTHRTQVEEYALKQFYIADEQDRSGNA
TRQTATTFYAAMCFLEVCTVFGALPDDLEEKLRYAKWKAADIIKALREGR
RPIPGAPGEAQAQEAIEPQESAQPEDDAKPVDTNRSLAPMNHTPSPPIVD
QPPRKPLYPGAQRLSPVPPAPPVREYDSQPNEYEPSAPPPMPYAPDLPPE
APPSMPYAPDLPPEAPPSMPYALAPSLPPEAPPYPSSEEVSPLYPPALDA
QADAQADYQPAAPKATAPPIPSLMLPDDEPKQNVSRTHATYRRAAPISRP
PQKLSREANGEKKLFVRAELGVPKRPLPKTPASPVTTVHAAQVDMKPYKP
SVQQTQEAQRLCKYAASALDFEDMKTAVSNLERALQLLKGRP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041212Vta1_C
IPR023175Vta1/CALS_N_sf
IPR039431Vta1/CALS_N
IPR044538Vta1-like