Ggra8331.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8331.t1
Unique NameGgra8331.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length379
Homology
BLAST of Ggra8331.t1 vs. uniprot
Match: A0A2V3IHS7 (Pseudouridine synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHS7_9FLOR)

HSP 1 Score: 335 bits (858), Expect = 1.540e-109
Identity = 175/312 (56.09%), Postives = 223/312 (71.47%), Query Frame = 0
Query:   54 QAQTHTLLVSAHETGQRVDKLLAERLDGDYSRSHIQWLIARGNVHIDGKLSANKSRRVVRGEAISVHAQPPPSATAAAPEHMALHVLYEDEQLLVLNKAAGMVVHPAPGHWRGTLVNALAARYQSLRAMHSTRAGIVHRLDKGTSGVMVVAKTALAHERLSRLFAARAVQKDYLAITVNDPCAPGCRTCTIEQPIARDRANRLRMAVTPPERGGRRARSVATTLAHDERALLHAVQLSIETGRTHQIRVHLRHRRAPVLGDALYGAIDVNRRFERLASRPMLHAWRLRFVHPFSGQSMCHTAPIPPDMAALL 365
            Q+Q  T   +A +TG R+DKLLA R   + SRS+IQ LI+ G+V IDGK   +KS RVV G  I V+  P       A E + L +LYEDE ++ +NK AGMVVHPAPG+W GT+VNALA RY+SLR M+S+RAGIVHRLDKGTSGV++  KT  A E+LS LFAAR ++K+Y+AITV +P   GC +  I++P+ R   +R+RM V P   GGR A+SV   +A D R+LLH V++ IETGRTHQIRVHLRH RAPVLGD LYGA D+N RF  LASRP+LHAW+L   HPF+ + +  T+ +P DM +LL
Sbjct:   61 QSQVETFQTTAEQTGTRIDKLLACRFK-ERSRSYIQSLISSGHVQIDGKSPVSKSHRVVPGCEIVVNLVPTEREQPVAAEEIPLEILYEDEHVVFVNKQAGMVVHPAPGNWSGTVVNALAHRYKSLREMNSSRAGIVHRLDKGTSGVLLAGKTQQACEKLSELFAARQLKKEYIAITVGNPAGKGCISRIIDEPVGRCPTDRIRMCVLPEHSGGRSAKSVVQVVASDARSLLHVVKVGIETGRTHQIRVHLRHARAPVLGDELYGAGDINHRFSTLASRPLLHAWKLSLRHPFTNEFLTVTSELPRDMRSLL 371          
BLAST of Ggra8331.t1 vs. uniprot
Match: A0A1X6NJH3 (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJH3_PORUM)

HSP 1 Score: 251 bits (642), Expect = 1.190e-75
Identity = 153/371 (41.24%), Postives = 198/371 (53.37%), Query Frame = 0
Query:   46 EPELGVQAQAQTHTLLVSAHETGQRVDKLLAERLDGDYSRSHIQWLIARGNVHID------GKLSANKSRRVVRGEAISVHAQPPPSATAAAPEHMALHVLYEDEQLLVLNKAAGMVVHPAPGHWRGTLVNALAARYQSLRAM----------------------------------------HST-----RAGIVHRLDKGTSGVMVVAKTALAHERLSRLFAARAVQKDYLAITVNDPCAPGCRTCTIEQPIARDRANRLRMAVTPPERGGRRARSVATTLAHDERALLHAVQLSIETGRTHQIRVHLRHRRAPVLGDALYGAIDVNRRFERLASRPMLHAWRLRFVHPFSGQSMCHTAPIPPDMAALL 365
            E E+   A ++  T ++ A E GQR+DK+LA R  G  SRS+ Q L+A G+V +          +  K+ ++  G+A+ V   P  +     PE + L VLYEDE ++ +NK AG+VVHPAPG+W GTLV+ALA RY+ +  M                                        H+      R G+VHRLDKGTSGVMV A T  AH  L   FAAR V K Y+AIT     A GC +     PI R    R +MAV     GGR A ++   +A D   LLH  +++I TGRTHQIRVH    +APVLGD LYG+ +VNRRF   A RPMLHA  L   HP +G+ +   AP+P DMA LL
Sbjct:  114 EEEVDADALSEVATFVIDAEEAGQRLDKVLAARFPGQ-SRSYYQALVADGHVTVTEGGGAPASAAPRKAAKLRAGDAVRVVLAPTAAELPLVPEDIPLDVLYEDEHMVAVNKPAGLVVHPAPGNWTGTLVHALAYRYKGILEMVEQPPXXXXXDGTAGCXXXXXXXXXXVAADDDGSGEWATPHAASLAAKRPGLVHRLDKGTSGVMVAALTPAAHRALVAAFAARRVDKTYVAITAGSAAAVGCASAEFASPIGRHPTERTKMAVVATADGGRPAHTLVENVASDAAGLLHVARVTIATGRTHQIRVHAAAAKAPVLGDGLYGSAEVNRRFHAAAPRPMLHAAALGLDHPVTGERLELHAPLPADMAHLL 483          
BLAST of Ggra8331.t1 vs. uniprot
Match: A0A212KRQ0 (Pseudouridine synthase n=1 Tax=Chlamydiales bacterium SCGC AG-110-P3 TaxID=1871323 RepID=A0A212KRQ0_9CHLA)

HSP 1 Score: 246 bits (627), Expect = 1.480e-75
Identity = 148/317 (46.69%), Postives = 198/317 (62.46%), Query Frame = 0
Query:   53 AQAQTHTLLVSAHETGQRVDKLLAERLDGDYSRSHIQWLIARGNVHIDGKLSANKSRRVVRGEAISVHAQPPPSATAAAPEHMALHVLYEDEQLLVLNKAAGMVVHPAPGHWRGTLVNALAARY-QSLRAMHSTRAGIVHRLDKGTSGVMVVAKTALAHERLSRLFAARAVQKDYLAITVNDPCAPGCRTCTIEQPIARDRANRLRMAVTPPERGGRRARSVATTLAHDERALLHAVQLSIETGRTHQIRVHLRHRRAPVLGDALYGAIDVNRRFERLASRPMLHAWRLRFVHPFSGQSMCHTAPIPPDMAALLAHM 368
            A  + +T +VS  E G R+DKLL++R  G  SRS+ Q LI    V ++G+    K  R   G+ + V     P      PE++ L VLYED+ L+++NK+AGMVVHPAPG+W GT VNAL      S +A  S R GIVHRLDK TSG +V AK     +RL  LF+ R + K+Y+A+ V +P   G    T++ PI R   +R +MAV   E GGR A +  +TLAH +R  L  V+L +ETGRTHQIRVHLRHR  P+LGD +YG   +NR++   ASR MLHA+RLRF+HP +G+ +   APIP DM   +A +
Sbjct:   17 ADPEINTFVVSDSEAGSRLDKLLSQRYQGQQSRSYFQKLIRNELVLLNGR-PVKKQVRPESGDEVEVEFALTPEVNLH-PENLPLEVLYEDDHLIIINKSAGMVVHPAPGNWTGTFVNALLYHCGDSFQAEASLRPGIVHRLDKNTSGCLVAAKNLHVQQRLVELFSLRKIYKEYIAVCVGNP-GDG----TVDVPIGRHPVHRKQMAVI--ESGGRHAVTHYSTLAHKDR--LSVVKLVLETGRTHQIRVHLRHRGMPILGDCVYGTEAMNRQYS--ASRQMLHAYRLRFMHPITGEKLDVMAPIPVDMRLQIARV 320          
BLAST of Ggra8331.t1 vs. uniprot
Match: A0A7S3EKN7 (Pseudouridine synthase n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EKN7_9RHOD)

HSP 1 Score: 241 bits (616), Expect = 4.590e-73
Identity = 132/307 (43.00%), Postives = 186/307 (60.59%), Query Frame = 0
Query:   62 VSAHETGQRVDKLLAERLDGDYSRSHIQWLIARGNVHIDGKLSANKSRRVVRGEAISVHAQPPPSATAAAPEHMALHVLYEDEQLLVLNKAAGMVVHPAPGHWRGTLVNALAARYQS-LRAMHST--RAGIVHRLDKGTSGVMVVAKTALAHERLSRLFAARAVQKDYLAITVNDPCAPGCRTCTIEQPIARDRANRLRMAVTPPERGGRRARSVATTLAHDERALLHAVQLSIETGRTHQIRVHLRHRRAPVLGDALYGAIDVNRRFERLASRPMLHAWRLRFVHPFSGQSMCHTAPIPPDMAALL 365
            +S  E   R+DK+L  R +G +SR++   LI    V +DG + A K+ ++  G  + V        +   P  + L+++YEDE +LVLNK AGMVVHPAPG+W GTLVNALA RY+     +H+   R GIVHRLD+GTSGV++VA+T  A   L   F  RAV+K+YLA+T  +P + G  +  + QPI R    R  MA+   E GGR + +V   +A D   +   + +++ETGRTHQIRVHL+H RAPVLGD +YG    N R  +   RP+LHA+RL   HP +G+ +   A  P D+  ++
Sbjct:   58 ISDKEADVRLDKVLTNRYEG-FSRNYFGELITSNKVTVDGNVLAKKAAKLKEGSKVEVTFTETNDPSVIVPSDIPLNIIYEDEHILVLNKDAGMVVHPAPGNWDGTLVNALAFRYKEHFLEVHANEMRPGIVHRLDQGTSGVIIVARTPAATRNLQDQFRLRAVKKNYLAVTCRNPFSRGTVSMRVNQPIGRHSTRRTEMAIVSEENGGRASSTVFYHIASDASDMTSLLHVALETGRTHQIRVHLKHLRAPVLGDEVYGYETFNTRVGKHVKRPLLHAFRLEVDHPITGERLLFQAKPPSDVVKVI 363          
BLAST of Ggra8331.t1 vs. uniprot
Match: A0A328YRC3 (Pseudouridine synthase n=1 Tax=Acidovorax anthurii TaxID=78229 RepID=A0A328YRC3_9BURK)

HSP 1 Score: 235 bits (600), Expect = 2.750e-71
Identity = 145/315 (46.03%), Postives = 194/315 (61.59%), Query Frame = 0
Query:   55 AQTHTLLVSAHETGQRVDKLLAERLDGDYSRSHIQWLIARGNVHIDGKLSANKSRRVVRGEAISVHAQPPPSATAAAPEHMALHVLYEDEQLLVLNKAAGMVVHPAPGHWRGTLVNALAARYQSLRAMHSTRAGIVHRLDKGTSGVMVVAKTALAHERLSRLFAARAVQKDYLAITVNDPCAPGCRTCTIEQPIARDRANRLRMAVTP-PERGGRRARS-VATTLAHDERALLHAVQLSIETGRTHQIRVHLRHRRAPVLGDALYGAIDVNRRFERLAS--RPMLHAWRLRFVHPFSGQSMCHTAPIPPDMAALL 365
            A+T  + V A + G R+DK LAE L  ++SRS++Q L+    V ++G+++A  S RV  G+ ++V  +P P + A  PE MAL V++ED+ LLV+NK AG+VVHPAPG+W GTL+N L  R    RAM   RAGIVHRLDK TSG+MVVA+     + L ++ AAR V + YLA+ +     P  RT  +E+PI RD  NRLRMAV       G+ AR+ +A      E  L+H    ++ TGRTHQIRVH+   R P++ DALYG        E  A   R  LHA+RL F HP +G  +   AP+PPDMAA L
Sbjct:   34 AETRVVRVPARQHGMRLDKALAE-LVPEFSRSYLQQLLGEAGVLVNGRVAAKPSARVQAGDELAVELKPTPQSQAFRPETMALDVVHEDDHLLVVNKPAGLVVHPAPGNWSGTLLNGLLGR--DPRAMAVPRAGIVHRLDKDTSGLMVVARERAVMDALVKMIAARDVSRQYLALGLGAWTGPAERT--VEEPIGRDPRNRLRMAVVDLAAHSGKPARTDIALLDGGGEGCLVHC---TLHTGRTHQIRVHMAWLRHPLVSDALYGG-------EPAAGMRRQALHAYRLAFTHPVTGADLVFRAPLPPDMAAAL 333          
BLAST of Ggra8331.t1 vs. uniprot
Match: RluA family pseudouridine synthase n=1 Tax=Ramlibacter alkalitolerans TaxID=2039631 RepID=UPI001F38DCE7 (RluA family pseudouridine synthase n=1 Tax=Ramlibacter alkalitolerans TaxID=2039631 RepID=UPI001F38DCE7)

HSP 1 Score: 234 bits (596), Expect = 7.410e-71
Identity = 143/318 (44.97%), Postives = 194/318 (61.01%), Query Frame = 0
Query:   53 AQAQTHTLLVSAHETGQRVDKLLAERLDGDYSRSHIQWLIARGNVHIDGKLSANKSRRVVRGEAISVHAQPPPSATAAAPEHMALHVLYEDEQLLVLNKAAGMVVHPAPGHWRGTLVNALAARYQSLRAMHSTRAGIVHRLDKGTSGVMVVAKTALAHERLSRLFAARAVQKDYLAITVNDPCAPGCRTCTIEQPIARDRANRLRMAVTPPERG-GRRARSVATTLAHDERALLHAVQLSIETGRTHQIRVHLRHRRAPVLGDALYGAIDVNRRFERLASRPMLHAWRLRFVHPFSGQSMCHTAPIPPDMAALLAHMG 369
            A+A+T   +V A   G+R+D+ LA  + G +SRS++Q LI  G V + G  +   +++V  GEA  +  +P P + A  PE + L V++EDE LLV++K AG+VVHPAPG+W GTL+NAL AR    R +   RAGIVHRLDK TSG+MVVA+T  A ERL ++ AAR V + Y+A+       P  R   ++  I RD  NRLRMAV   +R  G+ A +V   +   E     AV+ ++ETGRTHQIRVHL H   P++ D LYG +          SR  LHA+RL FVHP +GQ +   AP+PPD+ A  A  G
Sbjct:    7 AEAETRAFVVDAALHGERLDRALAALVPG-FSRSYLQQLIEEGAVRLRGSAALKPAQKVRAGEAGEIDLRPTPQSQAFLPEPLPLAVVHEDEHLLVIDKPAGLVVHPAPGNWSGTLLNALLARDAGARML--PRAGIVHRLDKDTSGLMVVARTRAAMERLVQMIAAREVSRQYMALAHRPWEGPAMRR--VDAAIGRDPRNRLRMAVVDLQRHPGKPAATVLQRMQQAEAGC--AVRCTLETGRTHQIRVHLAHTGHPLVADPLYGGVPAAG-----LSRQALHAFRLAFVHPATGQPLALHAPLPPDLRAAWASWG 312          
BLAST of Ggra8331.t1 vs. uniprot
Match: A0A5C7P7T4 (Pseudouridine synthase n=1 Tax=Burkholderiaceae bacterium TaxID=2030806 RepID=A0A5C7P7T4_9BURK)

HSP 1 Score: 235 bits (599), Expect = 8.040e-71
Identity = 140/309 (45.31%), Postives = 190/309 (61.49%), Query Frame = 0
Query:   53 AQAQTHTLLVSAHETGQRVDKLLAERLDGDYSRSHIQWLIARGNVHIDGKLSANKSRRVVRGEAISVHAQPPPSATAAAPEHMALHVLYEDEQLLVLNKAAGMVVHPAPGHWRGTLVNALAARYQSLRAMHSTRAGIVHRLDKGTSGVMVVAKTALAHERLSRLFAARAVQKDYLAITVNDPCAPGCRTCTIEQPIARDRANRLRMAVTPPERGGRRARSVATTLAHDERALLHAVQLSIETGRTHQIRVHLRHRRAPVLGDALYGAIDVNRRFERLASRPMLHAWRLRFVHPFSGQSMCHTAPIPPDM 361
            A A+       A E GQR+D++LA  +D ++SRS++Q L+ RG V ++G + A  SR+   G  I V  + P  + A  PE + L VL+EDE LLV+NK  GMVVHPAPGHWRGTL+NAL A + +   +   RAGIVHRLDK TSGVMVVAK+  A  RLS   A R V+++YLA++   P      +  ++ PI RD  +R++MAV     GGR A++  T L   +   L  V   ++TGRTHQIRVH++H    + GDA+YG      R     SR  LHAWRL F+HP +G+ +C TAP+  D+
Sbjct:   55 ADAECRAFRCGAAEVGQRLDRILAMHVD-EFSRSYLQTLVERGLVRVNGVVQATASRKPAPGALIEVRLELPEESRAFVPEPIELEVLHEDEHLLVVNKPVGMVVHPAPGHWRGTLLNALLAHHAAASTL--PRAGIVHRLDKETSGVMVVAKSLTAMNRLSEAIALREVKREYLAVS-QAPWRHEDGSFWVDAPIGRDPVSRVKMAVVL---GGREAQTQITRLWASDG--LTGVHCRLKTGRTHQIRVHMQHVGMVLAGDAVYGG-----RVVGPLSRQALHAWRLSFMHPVTGEPLCLTAPMAEDL 349          
BLAST of Ggra8331.t1 vs. uniprot
Match: A0A0G3BLV4 (Pseudouridine synthase n=1 Tax=[Polyangium] brachysporum TaxID=413882 RepID=A0A0G3BLV4_9BURK)

HSP 1 Score: 233 bits (595), Expect = 1.370e-70
Identity = 140/305 (45.90%), Postives = 189/305 (61.97%), Query Frame = 0
Query:   61 LVSAHETGQRVDKLLAERLDGDYSRSHIQWLIARGNVHIDGKLSANKSRRVVRGEAISVHAQPPPSATAAAPEHMALHVLYEDEQLLVLNKAAGMVVHPAPGHWRGTLVNALAARYQSLRAMHSTRAGIVHRLDKGTSGVMVVAKTALAHERLSRLFAARAVQKDYLAITVNDPCAPGCRTCTIEQPIARDRANRLRMAVTPPERGGRRARSVATTLAHDERALLHAVQLSIETGRTHQIRVHLRHRRAPVLGDALYG---AIDVNRRFERLASRPMLHAWRLRFVHPFSGQSMCHTAPIPPDMA 362
            +VSA + GQR+DK+L   L G++SRSH+Q LI +G V +DG+ +   SR+V+ G+ + V  +P P + A  PE +AL V++EDE L+V++K AG+VVHPA G+W GTL+N L A +    A+   RAGIVHRLDK TSG+MVV KT  A   L R  AAR V ++YLA+   +   P  R   I+ PI RD   R+RMAV P   GG+ AR+    LA  +     A++  + TGRTHQIRVHL  R  P++ D LYG   A+D+ R+         LHA RL   HP SGQ +   AP+P D+A
Sbjct:   41 VVSAEQHGQRLDKVLVS-LAGEFSRSHLQSLIEQGLVELDGRQATTASRKVLAGQRVVVELRPTPQSQAFRPESIALSVVFEDEHLMVVDKPAGLVVHPAAGNWSGTLLNGLLAHHAGAAAL--PRAGIVHRLDKDTSGLMVVGKTLEAVTALVRAIAAREVHREYLALAHGEVLQPE-RLAVIDAPIGRDPQTRVRMAVVP---GGKTARTDVEVLARGQGCT--ALRCRLHTGRTHQIRVHLASRGFPLVADVLYGGRAALDLERQ--------ALHAARLGLTHPVSGQPLSFEAPLPGDLA 328          
BLAST of Ggra8331.t1 vs. uniprot
Match: A0A317RAP3 (Pseudouridine synthase n=2 Tax=Melaminivora alkalimesophila TaxID=1165852 RepID=A0A317RAP3_9BURK)

HSP 1 Score: 232 bits (592), Expect = 4.200e-70
Identity = 153/325 (47.08%), Postives = 194/325 (59.69%), Query Frame = 0
Query:   47 PELGVQAQAQTHTLLVSAHETGQRVDKLLAERLDGDYSRSHIQWLIARGNVHIDGKLSANKSRRVVRGEAISVHAQPPPSATAAAPEHMALHVLYEDEQLLVLNKAAGMVVHPAPGHWRGTLVNALAARYQSLRAMHSTRAGIVHRLDKGTSGVMVVAKTALAHERLSRLFAARAVQKDYLAITVNDPCAPGCRTCTIEQPIARDRANRLRMAVTPPERG-GRRARSVATTLAHDERALLHAVQLSIETGRTHQIRVHLRHRRAPVLGDALYGAIDVNRRFERLASRPMLHAWRLRFVHPFSGQSM-CHTAPIPPDMAALLAHMG 369
            PE G    A+  +L V A    QR+DK LAE L  ++SRS++Q L+A+G V +DG+ +   ++RV  G  + V  +P   + A  PE + L V YEDE LLV++K AG+VVHPAPGHW GTL+NAL  R    RA    RAGIVHRLDK TSG+MVVA+T    + L RL AAR V + YLA+       P  R   IE  + RD   RLRMAV  P R   + AR+    LA  E ALL   + ++ TGRTHQIRVH+     P++ DALYG      R      R  LHAWRL FVHP +G ++ CH AP+P D+ A LAH G
Sbjct:   25 PEEGA---AELRSLTVPAALHQQRLDKALAE-LVPEFSRSYLQQLLAQGAVQLDGRPAPKPAQRVQAGARLLVEMRPTQQSQAFRPEQLPLAVAYEDEHLLVVDKPAGLVVHPAPGHWSGTLLNALLGR--DPRAAQLPRAGIVHRLDKDTSGLMVVARTRATMDALVRLIAAREVSRQYLALAWGRWRGPDERR--IEAAMGRDPRQRLRMAVLDPARHPAKPARTDVRLLAQGEEALL--ARCTLHTGRTHQIRVHMASIGHPLVADALYGG-----RPGAGLERQALHAWRLAFVHPVTGAALECH-APLPADLRAALAHWG 333          
BLAST of Ggra8331.t1 vs. uniprot
Match: RluA family pseudouridine synthase n=1 Tax=Aquabacterium tepidiphilum TaxID=2315841 RepID=UPI000E5AB719 (RluA family pseudouridine synthase n=1 Tax=Aquabacterium tepidiphilum TaxID=2315841 RepID=UPI000E5AB719)

HSP 1 Score: 231 bits (588), Expect = 1.360e-69
Identity = 144/307 (46.91%), Postives = 187/307 (60.91%), Query Frame = 0
Query:   56 QTHTLLVSAHETGQRVDKLLAERLDGDYSRSHIQWLIARGNVHIDGKLSANKSRRVVRGEAISVHAQPPPSATAAAPEHMALHVLYEDEQLLVLNKAAGMVVHPAPGHWRGTLVNALAARYQSLRAMHSTRAGIVHRLDKGTSGVMVVAKTALAHERLSRLFAARAVQKDYLAITVNDPCAPGCRTCTIEQPIARDRANRLRMAVTPPERGGRRARSVATTLAHDERALLHAVQLSIETGRTHQIRVHLRHRRAPVLGDALYGAIDVNRRFERLASRPMLHAWRLRFVHPFSGQSMCHTAPIPPDMA 362
            +  T +V     GQR+DKLL   L G++SRSH+Q LI  G V +DG+L    SR+V  G+ ++V  +P P + A  PE + L ++YEDE L+VL+K AG VVHPA G+W GTL+N L A ++   A    RAGIVHRLDK TSG+MVV KT  A  +L RL AAR V+++YLAIT  +   P  R  +IE PI RD  +R+RMAV     GG+ AR+  T +A   R    AV+  + TGRTHQIRVHL  R  P++ DA+YG      R      R  LHA RL F HP +G+ +   AP P D A
Sbjct:   32 EVRTAVVDEGTHGQRLDKLLVG-LAGEFSRSHLQTLIEDGCVQVDGRLVTTASRKVAFGQRVTVELRPTPESQAFRPEPVPLAIVYEDEHLMVLHKPAGRVVHPAAGNWSGTLLNGLLAHHRG--AAQLPRAGIVHRLDKDTSGLMVVGKTLPAVTQLVRLIAAREVRREYLAITHGEIREPQ-RLASIEAPIGRDPQSRVRMAVVA---GGKPARTDVTLVA--ARDDFSAVRCKLHTGRTHQIRVHLASRGFPLVADAVYGG-----RPALGMERQALHATRLGFEHPCTGEPLVFEAPAPADFA 324          
The following BLAST results are available for this feature:
BLAST of Ggra8331.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHS71.540e-10956.09Pseudouridine synthase n=1 Tax=Gracilariopsis chor... [more]
A0A1X6NJH31.190e-7541.24Uncharacterized protein (Fragment) n=1 Tax=Porphyr... [more]
A0A212KRQ01.480e-7546.69Pseudouridine synthase n=1 Tax=Chlamydiales bacter... [more]
A0A7S3EKN74.590e-7343.00Pseudouridine synthase n=2 Tax=Rhodosorus marinus ... [more]
A0A328YRC32.750e-7146.03Pseudouridine synthase n=1 Tax=Acidovorax anthurii... [more]
RluA family pseudouridine synthase n=1 Tax=Ramlibacter alkalitolerans TaxID=2039631 RepID=UPI001F38DCE77.410e-7144.97RluA family pseudouridine synthase n=1 Tax=Ramliba... [more]
A0A5C7P7T48.040e-7145.31Pseudouridine synthase n=1 Tax=Burkholderiaceae ba... [more]
A0A0G3BLV41.370e-7045.90Pseudouridine synthase n=1 Tax=[Polyangium] brachy... [more]
A0A317RAP34.200e-7047.08Pseudouridine synthase n=2 Tax=Melaminivora alkali... [more]
RluA family pseudouridine synthase n=1 Tax=Aquabacterium tepidiphilum TaxID=2315841 RepID=UPI000E5AB7191.360e-6946.91RluA family pseudouridine synthase n=1 Tax=Aquabac... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006225Pseudouridine synthase, RluC/RluDTIGRFAMTIGR00005TIGR00005coord: 66..367
e-value: 1.9E-74
score: 248.6
IPR036986RNA-binding S4 domain superfamilyGENE3D3.10.290.10coord: 54..123
e-value: 3.5E-14
score: 54.0
IPR006145Pseudouridine synthase, RsuA/RluA-likePFAMPF00849PseudoU_synth_2coord: 146..306
e-value: 2.0E-28
score: 99.5
IPR006145Pseudouridine synthase, RsuA/RluA-likeCDDcd02869PseudoU_synth_RluA_likecoord: 146..342
e-value: 1.76605E-59
score: 189.086
NoneNo IPR availableGENE3D3.30.2350.10Pseudouridine synthasecoord: 137..371
e-value: 4.4E-65
score: 221.3
NoneNo IPR availablePANTHERPTHR21600:SF57RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Dcoord: 60..366
NoneNo IPR availablePANTHERPTHR21600MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASEcoord: 60..366
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..378
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePROSITEPS50889S4coord: 69..140
score: 11.338152
NoneNo IPR availableSUPERFAMILY55174Alpha-L RNA-binding motifcoord: 68..123
IPR006224Pseudouridine synthase, RluC/RluD, conserved sitePROSITEPS01129PSI_RLUcoord: 190..204
IPR002942RNA-binding S4 domainCDDcd00165S4coord: 69..150
e-value: 5.50419E-8
score: 47.6294
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 132..369

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:115699..116835 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8331.t1Ggra8331.t1Gracilaria gracilis GNS1m malemRNAtig00000041_pilon 115699..116835 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8331.t1 ID=Ggra8331.t1|Name=Ggra8331.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=379bp
MGGAQGAFLTAAALRARALRRRAAPLAICAPTRRVRACASAATAAEPELG
VQAQAQTHTLLVSAHETGQRVDKLLAERLDGDYSRSHIQWLIARGNVHID
GKLSANKSRRVVRGEAISVHAQPPPSATAAAPEHMALHVLYEDEQLLVLN
KAAGMVVHPAPGHWRGTLVNALAARYQSLRAMHSTRAGIVHRLDKGTSGV
MVVAKTALAHERLSRLFAARAVQKDYLAITVNDPCAPGCRTCTIEQPIAR
DRANRLRMAVTPPERGGRRARSVATTLAHDERALLHAVQLSIETGRTHQI
RVHLRHRRAPVLGDALYGAIDVNRRFERLASRPMLHAWRLRFVHPFSGQS
MCHTAPIPPDMAALLAHMGAAQLVTAPL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006225PsdUridine_synth_RluC/D
IPR036986S4_RNA-bd_sf
IPR006145PsdUridine_synth_RsuA/RluA
IPR006224PsdUridine_synth_RluC/D_CS
IPR002942S4_RNA-bd
IPR020103PsdUridine_synth_cat_dom_sf