Ggra833.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra833.t1
Unique NameGgra833.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length160
Homology
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BLAST of Ggra833.t1 vs. uniprot
Match: A0A2V3J009 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J009_9FLOR)

HSP 1 Score: 139 bits (351), Expect = 1.670e-39
Identity = 77/144 (53.47%), Postives = 93/144 (64.58%), Query Frame = 0 
Query:    1 MPFRCKWHFSRRAFCAPVLPAGGTHSHSAACVRRPCVAVVDWPFAALPIGSLITAGVSIGILAATFENMLNVIYRRRRLVDYSDDELCAYCSGFGTVRCEVCNSRGAIFVGLTYFQRVCPACNGNKRERCRRCTGSGKSGMKKS 144
            M  R +   ++RAFCAP + +      +A C R P + +  +  + LP+GS+I AGVSIGIL ATFENMLNV+Y   R+ D SDDELC  CSGFGTVRCEVCNSRGA+FVG T FQRV                GSGK+GMKKS
Sbjct:    1 MSSRRRARNAQRAFCAPWVASWTPLVQTAICAREPALGL-GYDLSVLPVGSIIAAGVSIGILGATFENMLNVLYNHNRVRDSSDDELCPNCSGFGTVRCEVCNSRGAVFVGGTSFQRVXXXXXXXXXXXXXXXAGSGKTGMKKS 143
The following BLAST results are available for this feature:
BLAST of Ggra833.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J0091.670e-3953.47Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..43
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..66
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..28
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 67..159
NoneNo IPR availableTMHMMTMhelixcoord: 44..66
IPR036410Heat shock protein DnaJ, cysteine-rich domain superfamilySUPERFAMILY57938DnaJ/Hsp40 cysteine-rich domaincoord: 80..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000202_piloncontigtig00000202_pilon:16864..17548 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra833.t1Ggra833.t1Gracilaria gracilis GNS1m malemRNAtig00000202_pilon 16864..17548 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra833.t1 ID=Ggra833.t1|Name=Ggra833.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=160bp
MPFRCKWHFSRRAFCAPVLPAGGTHSHSAACVRRPCVAVVDWPFAALPIG
SLITAGVSIGILAATFENMLNVIYRRRRLVDYSDDELCAYCSGFGTVRCE
VCNSRGAIFVGLTYFQRVCPACNGNKRERCRRCTGSGKSGMKKSYTQLEQ
QQPPDNSLQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036410HSP_DnaJ_Cys-rich_dom_sf