Ggra8326.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra8326.t1
Unique Name	Ggra8326.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	362

Homology

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BLAST of Ggra8326.t1 vs. uniprot
Match: A0A2V3IXA7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXA7_9FLOR)

HSP 1 Score: 285 bits (728), Expect = 9.760e-83
Identity = 173/286 (60.49%), Postives = 205/286 (71.68%), Query Frame = 0

Query:   87 SSLNLFHSAMSH-----HSPSSXXXXXXXXXXXLPSPD------ESDVITHSTVPPSPSRAPSKHLHPSRWFFHKDKDRDRDKLPLLSTPPRIPKRVRTKDCLRI-RQDDMRYHRSTSDKSSIASDERRLQPQPSRLQSPTPNPFRSAPPSVSTQNPSLSRNDSPYLQSQTRDLSDDNDWVTDQLADVDAQPVPTPQHVLSCTSAAAVPAKPPLLHRDTITLRVFDDALEQTTETAAPVQNVIGVFDPAAETDECGDDFEFEQSTLPSAAQTQFLSKHTFPQWLVQ 360
            SSL+ FHSA+SH     HSPS  XXXXXXXXXX           ESD++THSTVP SP RAPSKH H SRWFF+KDK+RD++K    STPPR PKR R KD LR+ R D+ R++R+ SDKSSIASD+RR    PSRLQSP  N  R A PS ST  P+LSR D+   QS TRD+S+++DW  D+L+D D QPVPT Q  LS      +P  PPL HRDTITLR FDDALEQT E+AAPV+NVIGVFDPAAETD+  DDF+ EQS+ P+ A  +   KH+FPQWL+Q
Sbjct:   19 SSLHSFHSAVSHQPLSSHSPSVRXXXXXXXXXXXXXXXXXXXXVESDLVTHSTVPTSPPRAPSKHSHRSRWFFNKDKERDKEKPYPPSTPPRHPKRPRAKDRLRLSRPDETRFYRNPSDKSSIASDDRRALATPSRLQSPAVNIVRPAAPSPSTPTPALSRLDTQPTQSNTRDVSEEDDWGIDELSDDDVQPVPTSQPPLSRQKQNVIPPTPPLSHRDTITLRAFDDALEQTAESAAPVRNVIGVFDPAAETDDWADDFDLEQSSPPATASAREAGKHSFPQWLIQ 304

The following BLAST results are available for this feature:

BLAST of Ggra8326.t1 vs. uniprot

BLAST of Ggra8326.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IXA7	9.760e-83	60.49	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 144..161
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..249
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..253
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..200
None	No IPR available	TMHMM	TMhelix		coord: 12..34

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000241_pilon	contig	tig00000241_pilon:46629..47714 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra8326.t1	Ggra8326.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000241_pilon 46629..47714 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra8326.t1 ID=Ggra8326.t1|Name=Ggra8326.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=362bp
MRDAYNGRLQAAAFGAECAPLAACGWLLLHAAAMGVAGQRFLCCCVLLGA
RGPRRARDETGAGAEMAVLHSQPSPAQQPPPSFDSSSSLNLFHSAMSHHS
PSSSSSSPSPSSASLPSPDESDVITHSTVPPSPSRAPSKHLHPSRWFFHK
DKDRDRDKLPLLSTPPRIPKRVRTKDCLRIRQDDMRYHRSTSDKSSIASD
ERRLQPQPSRLQSPTPNPFRSAPPSVSTQNPSLSRNDSPYLQSQTRDLSD
DNDWVTDQLADVDAQPVPTPQHVLSCTSAAAVPAKPPLLHRDTITLRVFD
DALEQTTETAAPVQNVIGVFDPAAETDECGDDFEFEQSTLPSAAQTQFLS
KHTFPQWLVQP*