Ggra8319.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8319.t1
Unique NameGgra8319.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length507
Homology
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BLAST of Ggra8319.t1 vs. uniprot
Match: A0A2V3ICW7 (Uma2 domain-containing protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICW7_9FLOR)

HSP 1 Score: 349 bits (896), Expect = 1.520e-112
Identity = 178/277 (64.26%), Postives = 218/277 (78.70%), Query Frame = 0 
Query:   69 SSFQELSPPITPDGQKLGTLHLQPATAQELFDIDRFIYGDYDLVDGLLIWRGMSERDRNKQQAKNLLHLFQQREQANPTSNRVATVQASIAIPTKRYLRS-QPSSSSAPPLSEDCDESSAPRNGHPNYSVLTADLAIGQKLSEEERRKLSPASKNITFPLLNPGRPPEAVYECSSTKESRDMKEKPDLYAAAEIPKYIVLNNRVRSKRSQPAVHEGNLRDGKYEGLNMPLRGTDKVDLGPIGILDAKDCINPGDVDGRVHREGREQRMRRQEAEKRK 344
            S FQE  P    D +KLG LHLQPAT +ELFDIDRF YG+YDLV+GLLIWRGMSE +RNK+QAK+LL+ FQ+ EQ  PT+ RVAT++A+IAIPTKRYL S QPSSS+APP SED ++S  PR GHP+YSV+ AD A+G+++S E+R  LSP S  ITFPL     PPE V E +ST   RDM EK +LYA  +IPKYI ++N  R+K  QPAV+EGNLR+GKYEG+  PLRG D+V+LGPIG+L AKDCI+PG  D RVHREGREQRM+R+EAEK++
Sbjct:   39 SLFQEELPAAALDRRKLGALHLQPATVEELFDIDRFKYGEYDLVEGLLIWRGMSESNRNKEQAKHLLYRFQRAEQDKPTTRRVATLEATIAIPTKRYLMSHQPSSSNAPPQSEDSEKSPTPRRGHPDYSVVRADFAVGERISNEDRALLSPGSSKITFPLKR--TPPEVVVENTSTNGRRDMVEKQELYAQRKIPKYITIHNDARAKNPQPAVYEGNLRNGKYEGMEKPLRGEDEVNLGPIGVLKAKDCIHPGSPDARVHREGREQRMKREEAEKKR 313
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BLAST of Ggra8319.t1 vs. uniprot
Match: A0A2V3IBX3 (Uma2 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBX3_9FLOR)

HSP 1 Score: 276 bits (706), Expect = 2.190e-85
Identity = 141/225 (62.67%), Postives = 177/225 (78.67%), Query Frame = 0 
Query:  121 MSERDRNKQQAKNLLHLFQQREQANPTSNRVATVQASIAIPTKRYLRS-QPSSSSAPPLSEDCDESSAPRNGHPNYSVLTADLAIGQKLSEEERRKLSPASKNITFPLLNPGRPPEAVYECSSTKESRDMKEKPDLYAAAEIPKYIVLNNRVRSKRSQPAVHEGNLRDGKYEGLNMPLRGTDKVDLGPIGILDAKDCINPGDVDGRVHREGREQRMRRQEAEKRK 344
            MSE +RNK+QAK+LL+ FQ+ EQ  PT+ RVAT++A+IAIPTKRYL S QPSSS+APP SED ++S  PR GHP+YSV+ AD A+G+++S E+R  LSP S  ITFPL     PPE V E +ST   RDM EK +LYA  +IPKYI ++N  R+K  QPAV+EGNLR+GKYEG+  PLRG D+V+LGPIG+L AKDCI+PG  D RVHREGREQRM+R+EAEK++
Sbjct:    1 MSESNRNKEQAKHLLYRFQRAEQDKPTTRRVATLEATIAIPTKRYLMSHQPSSSNAPPQSEDSEKSPTPRRGHPDYSVVRADFAVGERISNEDRALLSPGSSKITFPLKR--TPPEVVVENTSTNGRRDMVEKQELYAQRKIPKYITIHNDARAKNPQPAVYEGNLRNGKYEGMEKPLRGEDEVNLGPIGVLKAKDCIHPGSPDARVHREGREQRMKREEAEKKR 223
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BLAST of Ggra8319.t1 vs. uniprot
Match: A0A2V3IF83 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF83_9FLOR)

HSP 1 Score: 94.4 bits (233), Expect = 1.130e-19
Identity = 50/92 (54.35%), Postives = 66/92 (71.74%), Query Frame = 0 
Query:  154 VQASIAIPTKRYLRSQPSSSSAPPLSEDCDESSAPRNGHPNYSVLTADLAIGQKLSEEERRKLSPASKNITFPLLNPGRPPEAVYECSSTKE 245
            + A++AIP KRY R QPSSS+  PLS+D ++SS PR G+P YSV++ DLAI  KLS+E R ++SPAS+NI F L     PP+ V E SST +
Sbjct:    1 MDAAVAIPIKRYPRFQPSSSNDAPLSDDSNDSSTPRRGNPKYSVVSPDLAIANKLSDEPRSRISPASQNIRFRL---NHPPQFVLESSSTNK 89
The following BLAST results are available for this feature:
BLAST of Ggra8319.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3ICW71.520e-11264.26Uma2 domain-containing protein n=3 Tax=Gracilariop... [more]
A0A2V3IBX32.190e-8562.67Uma2 domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IF831.130e-1954.35Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 328..472
NoneNo IPR availableGENE3D1.10.40.30coord: 5..74
e-value: 6.3E-10
score: 40.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 318..506
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..63
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 163..180
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 318..488
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..58
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 163..194
NoneNo IPR availablePANTHERPTHR13270PROTEIN C20ORF116-RELATEDcoord: 38..383
NoneNo IPR availablePANTHERPTHR13270:SF4PHD ZINC FINGER-CONTAINING PROTEIN-RELATEDcoord: 38..383
IPR008538Putative restriction endonucleasePFAMPF05685Uma2coord: 229..301
e-value: 5.1E-5
score: 22.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000958_piloncontigtig00000958_pilon:168897..172424 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8319.t1Ggra8319.t1Gracilaria gracilis GNS1m malemRNAtig00000958_pilon 168897..172424 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8319.t1 ID=Ggra8319.t1|Name=Ggra8319.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=507bp
MKELEEPFGASQIGSMAGVQAGGDRQQLHEAISVHSMAAAKRVKQQSEGR
RTQMHSDKSTPAERIQTGSSFQELSPPITPDGQKLGTLHLQPATAQELFD
IDRFIYGDYDLVDGLLIWRGMSERDRNKQQAKNLLHLFQQREQANPTSNR
VATVQASIAIPTKRYLRSQPSSSSAPPLSEDCDESSAPRNGHPNYSVLTA
DLAIGQKLSEEERRKLSPASKNITFPLLNPGRPPEAVYECSSTKESRDMK
EKPDLYAAAEIPKYIVLNNRVRSKRSQPAVHEGNLRDGKYEGLNMPLRGT
DKVDLGPIGILDAKDCINPGDVDGRVHREGREQRMRRQEAEKRKQEEKEK
RRKAEEREQEEKKKRQQAEEREQEEKKKRQQAEEKRQKAEEREQEEKKKR
QKAEEKRQKAEKREQEEKEKRRKAEEREQEEKKKRQQAEEREQEEKKKRQ
KAEEKRQKAEEREQKGKRKRREREAKIKEQRELMRKAGLLPKLKQLGCKK
SASKEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008538Uma2