Ggra8318.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8318.t1
Unique NameGgra8318.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length223
Homology
BLAST of Ggra8318.t1 vs. uniprot
Match: A0A2V3IIH9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIH9_9FLOR)

HSP 1 Score: 361 bits (927), Expect = 4.650e-123
Identity = 162/218 (74.31%), Postives = 194/218 (88.99%), Query Frame = 0
Query:    5 EHAFVVEFDSYDSGADEQDSSSGHVAIYLLGSEICKTDTSFVSGDGSQYTVWLDYNGFATQAYVRVSTDGTRPTTAVLDCDVDIWNILIINTAHSVGFSAYNPSDQTGVLHTLVDSISVADGYKTYDDNNCASYDRCSLRSTSALCIDNIAGTTCQIIQCEPGYVWDVSGSNCCAFVEREAFVIKDGIDVSSLRIGDSVACQVMRKIVAYLTDESNCS 222
            ++AFVVEFDSY+SG DEQD SS H+AIYL G+EICKT+T+F  GDG+Q+TVWLDYNGFATQAYVRVSTDGTRPTTA LDCDVDIWN+L IN+AH+VGFSAYNP DQTG LHTLV SIS+ADGY+ YDD+NCASYDRCS RSTS+LC++ ++ TTCQI+QC+ G+VWDVSG NCCAFVE+EA+ +   +DVS+LR+GDSVAC   RKI+AYLTD+SNC+
Sbjct:  133 QNAFVVEFDSYNSGTDEQDVSSSHIAIYLSGAEICKTNTAFSFGDGTQHTVWLDYNGFATQAYVRVSTDGTRPTTATLDCDVDIWNVLNINSAHAVGFSAYNPPDQTGALHTLVGSISIADGYRPYDDDNCASYDRCSSRSTSSLCLEGVSATTCQIVQCDTGFVWDVSGGNCCAFVEKEAWEVSGSVDVSTLRVGDSVACVQTRKIIAYLTDQSNCT 350          
BLAST of Ggra8318.t1 vs. uniprot
Match: R7QFG8 (Lectin_legB domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFG8_CHOCR)

HSP 1 Score: 234 bits (596), Expect = 1.010e-72
Identity = 109/219 (49.77%), Postives = 149/219 (68.04%), Query Frame = 0
Query:    6 HAFVVEFDSYDSGADEQDSSSGHVAIYLLGSEICKTDTSFVSGDGSQYTVWLDYNGFATQAYVRVS--TDGTRPTTAVLDCDVDIWNILIINTAHSVGFSAYNPSDQTGVLHTLVDSISVADGYKTYDDNNCASYDRCSLRSTSALCIDNIAGTTCQIIQCEPGYVWDVSGSNCCAFVEREAFVIKDGIDVSSLRIGDSVACQVMRKIVAYLTDESNCS 222
            +AFVVEFDS +SG  EQD S+ HVAI+L G E C T+ +F    G +YTVW+DY+GFA++A VRVS   D TRPT+A L CDVDIW+ + I+TA+ VGF AYNPS   G  H+LVDS+SVAD Y  YD ++C+ Y  CS +S  ALC+     +TC +  C  GY+WD+SG++CCAFVE+  + + D         GD+VAC+ +++ +A+LT    C+
Sbjct:  140 NAFVVEFDSLNSGTSEQDESTNHVAIFLAGDEQCTTNVAFSFASGDKYTVWVDYSGFASKAEVRVSGANDDTRPTSATLSCDVDIWSTMDISTANHVGFMAYNPS-AGGAEHSLVDSLSVADSYNPYDLDSCSVYGSCSQKSVDALCLTPQTSSTCLLADCSAGYIWDLSGTDCCAFVEKSTWALSDSAGSGPFSAGDTVACEQVQRTIAFLTTADQCA 357          
The following BLAST results are available for this feature:
BLAST of Ggra8318.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IIH94.650e-12374.31Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QFG81.010e-7249.77Lectin_legB domain-containing protein n=1 Tax=Chon... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.200coord: 2..119
e-value: 3.4E-13
score: 51.8
IPR001220Legume lectin domainPFAMPF00139Lectin_legBcoord: 4..105
e-value: 6.3E-9
score: 35.7
IPR013320Concanavalin A-like lectin/glucanase domain superfamilySUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 5..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000958_piloncontigtig00000958_pilon:167221..167889 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8318.t1Ggra8318.t1Gracilaria gracilis GNS1m malemRNAtig00000958_pilon 167221..167889 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8318.t1 ID=Ggra8318.t1|Name=Ggra8318.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=223bp
MVQTEHAFVVEFDSYDSGADEQDSSSGHVAIYLLGSEICKTDTSFVSGDG
SQYTVWLDYNGFATQAYVRVSTDGTRPTTAVLDCDVDIWNILIINTAHSV
GFSAYNPSDQTGVLHTLVDSISVADGYKTYDDNNCASYDRCSLRSTSALC
IDNIAGTTCQIIQCEPGYVWDVSGSNCCAFVEREAFVIKDGIDVSSLRIG
DSVACQVMRKIVAYLTDESNCS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001220Legume_lectin_dom
IPR013320ConA-like_dom_sf