Ggra8317.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8317.t1
Unique NameGgra8317.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length922
Homology
BLAST of Ggra8317.t1 vs. uniprot
Match: A0A2V3IHG1 (Exosome component 10 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHG1_9FLOR)

HSP 1 Score: 848 bits (2190), Expect = 6.560e-295
Identity = 500/946 (52.85%), Postives = 635/946 (67.12%), Query Frame = 0
Query:    1 MDGSNSKQVCAEVLKALERAIRCSQPLPRRDELQLIRVTSPELKEKGNKLTEQVLSEIKSVASRYAVSILSSDSDSCSSHSSGSLSLRDSMFDQTAETTDEALQHFNIALDRARKISIAVVPPQGALCSKTSAPRVGIGNLGRSHGSSLDIEKPQIHFPDYPIDNSDAPFVAPYARDH-------YSDPANPHANKRKTPSQNVETYLRELYKKNSNPDIDQRHPYENEIVSSMQEMSTKEFKLEQVTVYKSMQSTPCTFVSTEEELFNVVERLKKASAIAVDIENHSVRSFQGFTCLIQISTRKEDFVIDALRLKGSIHRALAPIFTDEATVKVLHGADRDVQWLERDFGIYVVNMFDTGQAARLLKLPSASLAFLLSHFCDVSGSSKKKFQLADWRQRPLPKEMFKYARSDTHYLLYIFDRLRCELSNKRLLGKAWERSAIVSRKRHRKARFEPGIAKHLAARHCLGFDNHQLRLLEELCKWRDTTAREEDESFPYVAPLEVLFGIVRARDKARSVEGLLKHGFPDGIIPPLVYQNAKKLTELIGDALDAKIDGAADDKCRSVGHSEELPVQKQDDLKDKSVLIKARIVAEGQPKGSVGSSSQSSIVPKTGASFTSS-GMSGVQAPTKKQIVSKQEKELLSEGPKLKVISTSKSALLDSESESDSDSVGHVECSNAEHLDQSIAPNIGKGVEYIRTGELYLK---DEYESEGH-----GSKAVWRVGSPEC----ITERDEFSEGKGKGEVESLQPF---VRAANHSIFDLSDNSDDEQQGISEEATDKHSVEDKIASAKAEIAKDQAQRQASLILCADTDGAERNDYKKKIKRDIQPVEERTDV-IEEVISLREEARRAESSGSKKXXXXXXXXXXXXXXXXXXAFDYENAIAKKEQKKKAI--RRPDQYDPMRKLRGEREPGVKRRVKKRRRGRAQSMSFKA 920
            M  + S+Q C ++LKALE+A+RCSQ LP RDELQLIRVTSP LK+  N+L  Q+LSEIKS+ASRYAV I SSD+DS SS S+ S+S RDS+FD   ETTDEALQHFN ALD AR I  AVVPPQGAL    S  ++G  NLGRS+G  LD+EKPQ+HFPDYPIDNS APF+ PY+ +H         +  +PH++ R     +V+TYL+ELYK NSN +  QRHPYE EI+S+ QEM+ K F +E+  V+K M+STPC FV++EEELFNV ERLKK +AIAVDIENHSVRSFQGFTCLIQISTR+ED +ID L+L+G+IHRALAPIFTDE  VKVLHGAD+DVQWLERDFG+YVVNMFDTGQA+RLLKLPSASLAFLL+HFCDV+  SKKKFQLADWRQRP+P +MF YARSDTHYLLYI+DRLR EL+ K LL KAWERSA ++RKRH+KA+F+PGIAKHLAARH LG D HQ+RLLEELCKWRDTTAREEDES PYV+PL+V+FG+VRARDKARSVEGLLK+GFP G++PPL+Y+NA+KLTELI DALDAKID  A  K  +           QD  +D  ++    IV +        SSS+ S   +  +    S G + +Q+  KK  + + E    +   KL+V   S+S LLDS+ ES                   + PN G   + IR  +   +    ++ +EG      G++   R    E       + D++     + EV + Q      R A+ S+F+LSD SD E +  S+  T   ++ED++AS + E+A + ++R  S     +TD  E ++ K      +    E  +   EEV+SL E ARR+ +    K                   FDY+ AIA +E K+ +   R+P  ++PM+KL  + +   K+  KKRRRGR +SMSFKA
Sbjct:    1 MCSTTSEQQCGQLLKALEKALRCSQSLPFRDELQLIRVTSPTLKQHTNQLVTQLLSEIKSLASRYAVCIQSSDTDSTSSQSTASISARDSLFDLVTETTDEALQHFNTALDAARNIQNAVVPPQGALNPNASNVKIGTANLGRSYGGFLDLEKPQLHFPDYPIDNSHAPFIPPYSAEHGNQNNVFIQETGDPHSSSR-----HVDTYLQELYKNNSNSESKQRHPYETEILSAQQEMAKKPFAVEETIVFKPMKSTPCAFVTSEEELFNVAERLKKVTAIAVDIENHSVRSFQGFTCLIQISTREEDIIIDTLKLRGAIHRALAPIFTDETIVKVLHGADKDVQWLERDFGVYVVNMFDTGQASRLLKLPSASLAFLLTHFCDVAAISKKKFQLADWRQRPMPHDMFNYARSDTHYLLYIYDRLRAELAKKGLLEKAWERSASIARKRHKKAQFQPGIAKHLAARHSLGLDEHQIRLLEELCKWRDTTAREEDESLPYVSPLKVIFGVVRARDKARSVEGLLKYGFPGGLVPPLIYKNAEKLTELIRDALDAKIDDRAQAKSAA----------GQDKRQDTKIV---NIVIDDSS-----SSSEDSHTERASSGLDESKGAARLQSAEKKVELPRIE---FNPDIKLRVTKLSRSTLLDSDLES---------XXXXXXXSPRLVPN-GSMAQEIRDDDCAGERNTSQHCAEGDRPASIGARQTDRAMGVEVQFPYSGKHDDYVANTRELEVGNTQMMRLDTRTASKSVFELSDFSDAEDEPRSK--TKAQTIEDRVASVRTELAAENSRRVVSTTFHVETDKLEMSEEKTPPTDQVAKFAELEETKTEEVVSLIEAARRSGADRPAKRRKKGNPPSLHEEIKPMEPFDYDKAIADEEIKRNSSEKRKPKVFNPMQKLNNDWKLDSKKLAKKRRRGRGRSMSFKA 908          
BLAST of Ggra8317.t1 vs. uniprot
Match: R7Q3D8 (Exosome component 10 Rrp6 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3D8_CHOCR)

HSP 1 Score: 572 bits (1473), Expect = 1.430e-186
Identity = 307/594 (51.68%), Postives = 410/594 (69.02%), Query Frame = 0
Query:    6 SKQVCAEVLKALERAIRCSQPLPRRDELQLIRVTSPELKEKGNKLTEQVLSEIKSVASRYAVSILSSDSDSCSSHSSGSLSLRDSMFDQTAETTDEALQHFNIALDRARKISIAVVPPQGALCSKTSAPRVGIGNLGRSHGSSLDIEKPQIHFPDYPIDNSDAPFVAPYARDHYSDPANPHANKRKTPSQNVETYLRELYKKNSNP---DIDQRHPYENEIVSSMQEMSTKEFKLEQVTVYKSMQSTPCTFVSTEEELFNVVERLKKASAIAVDIENHSVRSFQGFTCLIQISTRKEDFVIDALRLKGSIHRALAPIFTDEATVKVLHGADRDVQWLERDFGIYVVNMFDTGQAARLLKLPSASLAFLLSHFCDVSGSSKKKFQLADWRQRPLPKEMFKYARSDTHYLLYIFDRLRCELSNKRLLGKAWERSAIVSRKRHRKARFEPGIAKHLAARHCLGFDNHQLRLLEELCKWRDTTAREEDESFPYVAPLEVLFGIVRARDKARSVEGLLKHGFPDGIIPPLVYQNAKKLTELIGDALDAKIDGAADDKCRSVGHSEELPVQKQ---DDLKD--KSVLIKARIVAEGQPKG 591
            SK  C  VLK+L R    S PLP+ D+L+L+    PE      + T +V + + + A+ Y  +  ++D +S SS S+ S++  +++FD+  E TDEAL+ FN ALDRAR I  A     GA+      P   +G+      + +++EKPQ+ FPD+P+DNSD  FV P                      +V+ YL+ELY+ NS     +++ +HPYE EI ++ +EM+ + FK E   VY+SM+STPCTF+ TEE+LF V  RLK+   +A+DIENHSVRSFQGFTCLIQ+STR+ED V+DAL L+GS+HRALAPIF DE+ VKVLHGAD+DVQWLERDFG++VVNMFDTGQAARLLK PSA+L++L + FCDV+G+SKKKFQL+DWRQRPLP +MF+YARSDTHYLLYI+DRL+ EL++K L  KAW+RSA+V+RKR++K R++ GI +HL A++ LGFD HQ+RLLEEL  WRD   REEDES  YVAPL  LFGIVRARD+ R+VEGL+K+GFP   +PP++  NA ++  LI D+LDAK+ G  + KC +       P+Q     D  K+  K V +  +   EG P G
Sbjct:   19 SKAHCVRVLKSLRRTAVESDPLPQGDDLELLHAVCPETSASLRRATRRVRAAVSAAAACYVPA--ATDPESESSDSAPSVAA-EALFDRVHEATDEALEQFNAALDRARGIQDAEPLETGAV-----GPETRLGSGRHRECAWVEMEKPQMAFPDWPVDNSDTAFVPPGVAG--------------AKGADVDVYLQELYQANSKASGGEMEGKHPYEEEIRAAEEEMAARVFKKEDTVVYRSMKSTPCTFIKTEEKLFEVANRLKRVGEVAIDIENHSVRSFQGFTCLIQMSTRREDVVVDALALRGSVHRALAPIFADESIVKVLHGADKDVQWLERDFGVFVVNMFDTGQAARLLKFPSAALSYLQARFCDVTGTSKKKFQLSDWRQRPLPDDMFQYARSDTHYLLYIYDRLKTELADKELTAKAWKRSAVVARKRYKKTRYDGGIPRHLCAKYGLGFDAHQIRLLEELYGWRDRKGREEDESLNYVAPLGSLFGIVRARDRVRTVEGLMKYGFPSKSVPPMIKANADEIVRLIVDSLDAKL-GDLEKKCAA----RPAPIQSSGAGDGAKEVPKGVAMHRKEAKEGLPSG 585          
BLAST of Ggra8317.t1 vs. uniprot
Match: A0A7S2ZEH5 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZEH5_9RHOD)

HSP 1 Score: 305 bits (780), Expect = 8.360e-87
Identity = 201/551 (36.48%), Postives = 297/551 (53.90%), Query Frame = 0
Query:    1 MDGSNSKQVCAEVLKALERAIRCSQPLPRRDELQLIRVTSPELKEKGNKLTEQVLSEIKSVASRYAVSILSSDSDSCSSHSSGSLSLRDSMFDQTAETTDEALQHFNIALDRARKISIAVVPPQGALCSKTSAPRVGIGNLGRSHGSSLDIEKPQIHFPDYPIDNSDAPF--VAPYARDHYSDPANPHANKRKTPSQNVETYLRELYKKNSNPDIDQRHPYENEIVSSMQEMSTKEFKLEQVTVYKSMQSTPCTFVSTEEELFNVVERLKKASAIAVDIENHSVRSFQGFTCLIQISTRKEDFVIDALRLKGSIHRALAPIFTDEATVKVLHGADRDVQWLERDFGIYVVNMFDTGQAARLLKLPSASLAFLLSHFCDVSGSSKKKFQLADWRQRPLPKEMFKYARSDTHYLLYIFDRLRCELSNKRLLGKAWERSAIVSRKRHRKARFEPGIAKHLAARHCLGFDNHQLRLLEELCKWRDTTAREEDESFPYVAPLEVLF---GIVRARDKARSVEGLLKHGFPDGIIPPLVYQNAKKLTELIGDALDAK 546
            +DGS  +Q C E+ + +   ++ S  L   +  + +   S E +    KL ++VL  ++ +                   S  S    D +FD   E  ++AL+   +AL    +I       QG L S+++  R    NL + H     ++KPQ+ F D+PIDNSD PF  VA       SD    H N+                   +N  +  +HPYEN+I+ + +  +      ++  ++ S + T  TFV  E +   ++E+L     IAVD+ENHS RS+QGF CL+QISTR EDFVIDA++L+  ++R L PIF++   VKVLHGA+ DVQWLERDFG+Y+VN+FDT  + +LL+L   SLAFLL  FCDV  S+KKKFQ +DWR RPLP++   YARSDTHYLLYI+DRLR  L  K +L + W  S+ VS +R+ K R      + L  +  +  D    R++ EL KWRDT AR EDES  +V   E++    G  +     R V+ L +      +   ++ + A  + +++ D ++AK
Sbjct:    7 LDGSVEEQ-CKELTRCIAGGVKQSNSLSGSESHEYLSSVSSEYRRSVRKLNKRVLKVLELLVG-----------------SGVSGKQVDEVFDSVVEYAEDALE---VALTNVEEIG-RDGEEQGEL-SRSAQFRRPSANLAKHH-----LKKPQLDFDDWPIDNSDTPFIPVAERKNPQLSDSVKQHVNRLSI----------------NNESVSLKHPYENDILQAAKSSALLPVP-DRPRLWGSFEKTEFTFVEDEPDFEVMLEKLLGEKEIAVDLENHSERSYQGFCCLMQISTRSEDFVIDAIKLRSIMNRLL-PIFSNPKVVKVLHGANHDVQWLERDFGLYIVNLFDTFASTKLLELQG-SLAFLLEFFCDVKNSNKKKFQRSDWRVRPLPEDQMNYARSDTHYLLYIYDRLRSMLKEKGVLEECWLNSSTVSLRRYTKPRLPADAGRRLLDKSNMKGDWRTTRVVNELLKWRDTIARREDESPQFVLANELVLEIAGNAKRFASERQVQRLSQR-----VGSEILSKEAASVAQIVSDTVEAK 505          
BLAST of Ggra8317.t1 vs. uniprot
Match: M2XKN4 (Exosome complex exonuclease RRP6 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XKN4_GALSU)

HSP 1 Score: 291 bits (746), Expect = 1.080e-82
Identity = 196/540 (36.30%), Postives = 292/540 (54.07%), Query Frame = 0
Query:   13 VLKALERAIRCSQPLPRRDELQLIRVTSPELKEKGNKLTEQVLSEIKSVASRYAVSILSSDSDSCSSHSSGSLSLRDSMFDQTAETTDEALQHFNIALDRARKISIAVVPPQGALCSKTSAPRVGIGNLGRSHGSSLDIEKPQIHFPDYPIDN--SDAPFVAPYARDHYSDPANPHANKRKTPSQNVETYLRELYKKNSNPDIDQRHPYENEIVSSMQEMSTKEFKLEQVTVYKSMQSTPCTFVSTEEELFNVVERLKKASAIAVDIENHSVRSFQGFTCLIQISTRKEDFVIDALRLKGSIHRALAPIFTDEATVKVLHGADRDVQWLERDFGIYVVNMFDTGQAARLLKLPSASLAFLLSHFCDVSGSSKKKF-QLADWRQRPLPKEMFKYARSDTHYLLYIFDRLRCELS-----NKRLLGKAWERSAIVSRKRHRKARFEPGIAKHLAARHCLGFDNHQLRLLEELCKWRDTTAREEDESFPYVAPLEVLFGIVRARDKARS-VEGLLKHGFPDGIIPPLVYQNAKKLTELIGDAL 543
            VLK    A+ C   LP +DEL     T     EK        L  +  +       I+S +++S    +   L   +++F+ T E  +  L+  +  LD  R   I     + +L S T        +  R+     D+ KPQ  FPDYPI+N  +D   VA         P+    N+    S+ ++++L +L++KN      +   Y  +++  ++  +        VT+Y  ++ T CTFV++   L +++ +L+K   IAVDIENHS RSFQGF CL+Q STR+EDFV+DA+ L+G + + L+ I  +   +KVLHGAD DVQWL+RDFG+Y+V+MFDTGQA+R LK P  SL++LL  +C++  S  KK+ QLADWR RPLP++MF YAR DTHYLLYI+DRL  EL      N  LL  A+  S  VS   + K +  P   + + +R  L FD  Q   L  LC+WRD  AR EDES  YV P + +  I +   ++ S + G   +      IPPL+     ++ +L+ +++
Sbjct:    7 VLKPFRAAVNCFNQLPLKDELDFYEKTCQPYSEK--------LQSVDHLLKTCLGQIVSQNTNSQGFDTETDL---ETIFENTQEAVEFFLEQTDDCLDALR--GIKKTSEEDSLQSSTPLS----SDERRTRWKQTDMPKPQKKFPDYPINNLLTDPNVVA--------TPSEFSTNESDAFSR-LDSHLFKLHQKNRKHSSAKVSDYYQKLLKELKNNADSFQGSSTVTLYLPLEDTKCTFVNSLSSLEDMITKLEKEKEIAVDIENHSYRSFQGFICLLQFSTRQEDFVVDAIELRGHL-KMLSKILENGNILKVLHGADSDVQWLQRDFGLYIVHMFDTGQASRQLKFPFLSLSYLLKRYCNIDNSKTKKYYQLADWRIRPLPEDMFSYARQDTHYLLYIYDRLCEELRQSSNCNNNLLTCAYRASIQVSMLIYEKPQMNPLEYQSILSRRKLHFDEKQTLALRTLCRWRDEIARIEDESLVYVLPEKCMIEIAKRIPQSESELRGCCPYS-----IPPLLKTYENEVLKLLQESI 514          
BLAST of Ggra8317.t1 vs. uniprot
Match: A0A151ZD76 (3'-5' exonuclease n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZD76_9MYCE)

HSP 1 Score: 286 bits (731), Expect = 3.650e-78
Identity = 200/547 (36.56%), Postives = 296/547 (54.11%), Query Frame = 0
Query:   13 VLKALERAIRCSQPLPRRDELQLIRVTSPELKEK----GNKLTEQVLSEIKSVASRYAVSIL-SSDSDSCSSHSSGSLSLRDSMFDQTAETTDEALQHFNIALDRARKISIAVVPPQGALCSKTSAPRVGIGNLGRSHGSSLDIEKPQIHFPDYPIDNSDAPFVAPYARDHYSDPANPHANKRKTPS--QNVETYLRELYKKNSNPDIDQRHPYENEIVSSMQEMSTKEFKLEQVTVYKSMQSTPCTFVSTEEELFNVVERLKKASAIAVDIENHSVRSFQGFTCLIQISTRKEDFVIDALRLKGSIHRALAPIFTDEATVKVLHGADRDVQWLERDFGIYVVNMFDTGQAARLLKLPSASLAFLLSHFCDVSGSSKKKFQLADWRQRPLPKEMFKYARSDTHYLLYIFDRLRCELSNK-----RLLGKAWERSAIVSRKRHRKARFEPGIAKHLAARHCLGFDNHQLRLLEELCKWRDTTAREEDESFPYVAPLEVLFGIVRARDKARSVEGLLKHGFPDGIIPPLVYQNAKKLTELIGDALDAKI 547
            + + L  A + S  LP  ++      T PE K K    G +L     + ++S   +  +++  ++D++  S   +G + L D M D+  +  D   Q  N   +    IS  +   Q     KT+   +  GN         +I +PQ  F D PIDNS+ PF+             P+A K   P   Q+ ET   ++ +      +   HPYE EI+S   + + K+ +  +  +YK +  TP T++ T ++L  +VE+LK    IA+D+ENHS RS+QGF CL+Q+STR EDF+ID L L+  ++R L  +FTD   VKVLHG+D D++WL+RDFG+Y+VNMFDTGQA+R+++ PSASLAFL+ +FC V  +  KK+QLADWR R +P+EM KYAR DTHYLLYI+DRLR EL  K       +     +S  +S  R+ K   +       AA+  L +   QL  L+ L  WR+  +REEDES  Y+ P +++  IV       SV+ +L        IPP +  +A  L +   D L +KI
Sbjct:   33 LFQKLVSATKISNSLPSEEDYAYYE-TFPEFKSKMGTIGKRLLNLTQNFVQSEDPKTKINLTDTNDTEELSYRFNGIVDLVDEMIDRVDKNIDPKYQQSN---NSNIYISSTITTGQNG---KTNEKNMFYGN---------NIVRPQFKFED-PIDNSNFPFLPKIK-------VKPNALKPLDPIFLQSYETSFGKIVRSKEQETLVYPHPYEYEIMSF--QYTAKQLQPCKEQLYKGLDKTPYTWIDTVQQLDELVEKLKFVEEIAIDLENHSYRSYQGFVCLMQVSTRTEDFIIDTLVLRSQMNR-LNVVFTDPKIVKVLHGSDSDIKWLQRDFGVYIVNMFDTGQASRVMEYPSASLAFLMKYFCSVDAN--KKYQLADWRIRMIPEEMIKYAREDTHYLLYIYDRLRNELFTKGGSKDTFIQLVLAKSRDLSLLRYEKDLIDDYTHIQFAAKSQLQYTPSQLATLKVLYHWRENISREEDESIRYILPNQIMLAIVEK--SPTSVQDILNISTT---IPPHLKVHAHTLIQ---DILKSKI 542          
BLAST of Ggra8317.t1 vs. uniprot
Match: exosome component 10-like n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015A8C1DC (exosome component 10-like n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015A8C1DC)

HSP 1 Score: 270 bits (690), Expect = 1.200e-77
Identity = 183/469 (39.02%), Postives = 263/469 (56.08%), Query Frame = 0
Query:   92 FDQTAETTDEALQHFNIALDRARKIS------IAVVPPQGALCSKTSAPRVGIGNLGRSHG--SSLDIEKPQIHFPDYPIDNSDAPFVAPYARDHYSDPANPHANKRKTPSQNVETYLRELYKKNSNPDIDQRHPYENEIVSSMQEMSTKEFKLEQVTVYKSMQSTPCTFVSTEEELFNVVERLKKASAIAVDIENHSVRSFQGFTCLIQISTRKEDFVIDALRLKGSIHRALAPIFTDEATVKVLHGADRDVQWLERDFGIYVVNMFDTGQAARLLKLPSASLAFLLSHFCDVSGSSKKKFQLADWRQRPLPKEMFKYARSDTHYLLYIFDRLRCELSN-----KRLLGKAWERSAIVSRKRHRKARFEPGIAKHLAARHCLGFDNHQLRLLEELCKWRDTTAREEDESFPYVAPLEVLFGIVRARDKARSVEGLLKHGFPDGIIPPLVYQNAKKLTELIGDALDAKI 547
            FD   E  +  L + +  LD A  +       I  V PQ ++ +  +  +    N  +S+   ++ +I +PQ+ F D  IDN+++ FV P  ++       P++ K           L  + +K+ + + +  HPYE EI     E + +  +  +  + K ++ TP  FV TEE+L ++ + LKK+   AVD+E+HS RSFQGF CL+QISTR++D+VID L L+G +H  L  +FT+   VKV HGAD D+ WL+RDFG+YVVN+FDTGQAAR+L     SL++LL H+C       KKFQLADWR RP+P EM KYAR DTHYLLYI+D L+ +L       K LL   +ERS ++  KR++K  F       L  +    F+  QL  L+EL  WRD  ARE DES  YV P  +L  I  A    R  +G+L    P   IPPLV Q   +L  ++  A ++ +
Sbjct:   23 FDLLTEVNNVILDNVSTNLDEASGLKKTEEELILAVKPQSSINTSWNKKQFN-SNCPQSYKLLTAKNISRPQLAFKDK-IDNTNSIFV-PIIKE------KPNSIKP----------LAVILEKDGDRE-EFCHPYELEIEKF--EPAEEHLQTVEPELPKPLEETPFIFVKTEEQLKHMCDDLKKSKEFAVDLEHHSYRSFQGFACLMQISTREKDYVIDVLELRGELH-ILNEVFTNPKIVKVFHGADMDILWLQRDFGLYVVNLFDTGQAARVLHFAHLSLSYLLKHYCK--KDLDKKFQLADWRIRPIPPEMLKYAREDTHYLLYIYDCLKNDLITNGNEMKNLLHSTFERSKMICLKRYQKPVFSDDKYLELYKKSKKTFNAKQLYCLKELYGWRDRIARENDESLAYVLPNHMLLQIAEALP--REQQGILACCNP---IPPLVKQQLNELHSIVLKANESSL 461          
BLAST of Ggra8317.t1 vs. uniprot
Match: A0A4Y2GUB0 (Exosome component 10 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2GUB0_ARAVE)

HSP 1 Score: 279 bits (714), Expect = 1.790e-77
Identity = 184/470 (39.15%), Postives = 260/470 (55.32%), Query Frame = 0
Query:   92 FDQTAETTDEALQHFNIALDRA-------RKISIAVVPPQGALCSKTSAPRVGIGNLGRSHGSSLDIEKPQIHFPDYPIDNSDAPFVAPYARDHYSDPANPHANKRKTPSQNVETYLRELYKKNSNPDIDQRHPYENEIVSSMQEMSTKEFKLEQV--TVYKSMQSTPCTFVSTEEELFNVVERLKKASAIAVDIENHSVRSFQGFTCLIQISTRKEDFVIDALRLKGSIHRALAPIFTDEATVKVLHGADRDVQWLERDFGIYVVNMFDTGQAARLLKLPSASLAFLLSHFCDVSGSSKKKFQLADWRQRPLPKEMFKYARSDTHYLLYIFDRLRCEL-----SNKRLLGKAWERSAIVSRKRHRKARFEPGIAKHLAARHCLGFDNHQLRLLEELCKWRDTTAREEDESFPYVAPLEVLFGIVRARDKARSVEGLLKHGFPDGIIPPLVYQNAKKLTELIGDALDAKI 547
            FD   E  D  L++ +I LD A        ++ +AV PP     S                 ++ ++ +PQ+ F D  ++N++ PFV P  R+       PH+ K           L   Y+ + +      HPYE EI    ++   +E   E+V   + K +  TP   V TEE+L  + + L K + IAVD+E+HS RSFQGFTCL+QISTR+ D+++DAL L+  ++  L  +FT+   VKVLHGAD DV WL+RDFGIY+VN+FDTGQAAR+L     SLA+LL H+C       K+FQLADWR RPLP EM KYAR DTHYLLY++D L+ +L       K LL   ++RS ++  K+++K  F+      L  ++   F+  QL  L+EL +WRD+ ARE DES  YV P  ++  I  A    R  +G+L    P   IPPLV Q   +L  +I  A D+ +
Sbjct:   95 FDLLVEANDTILENVSIYLDEASGPKKSDEELLLAVKPPSAINTSWNKKQFSSSSPQSYKLLTAKNVSRPQLSFKDK-VENTNTPFV-PIIRE------KPHSIKP----------LAITYEADKDEYC---HPYEWEI----EKFQPQEELFEEVEPVLPKPLDETPLVIVKTEEQLKKMCDELSKVNEIAVDLEHHSYRSFQGFTCLMQISTRETDYIVDALELRSEMY-ILNEVFTNPKIVKVLHGADMDVLWLQRDFGIYIVNLFDTGQAARVLHFAHLSLAYLLKHYCRFDVD--KRFQLADWRIRPLPAEMIKYAREDTHYLLYVYDCLKNDLIAAGNDMKNLLQSTFDRSKVICAKKYQKPLFDDDKYLELYKKNKKMFNAKQLYCLKELFEWRDSIARENDESIAYVLPNHMMLQIAEALP--REQQGILACCNP---IPPLVKQQLNELHSIILRANDSSL 531          
BLAST of Ggra8317.t1 vs. uniprot
Match: A0A3S3P749 (Exosome component 10-like protein (Fragment) n=2 Tax=Dinothrombium tinctorium TaxID=1965070 RepID=A0A3S3P749_9ACAR)

HSP 1 Score: 276 bits (705), Expect = 2.650e-77
Identity = 165/371 (44.47%), Postives = 215/371 (57.95%), Query Frame = 0
Query:  147 SSLDIEKPQIHFPDYPIDNSDAPFVAPYARDHYSDPANPHANKRKTPSQNVETYLRELYKKNSNPDIDQRHPYENEIVSSMQEMSTKEFKLEQVT--VYKSMQSTPCTFVSTEEELFNVVERLKKASAIAVDIENHSVRSFQGFTCLIQISTRKEDFVIDALRLKGSIHRALAPIFTDEATVKVLHGADRDVQWLERDFGIYVVNMFDTGQAARLLKLPSASLAFLLSHFCDVSGSSKKKFQLADWRQRPLPKEMFKYARSDTHYLLYIFDRLRCEL-----SNKRLLGKAWERSAIVSRKRHRKARFEPGIAKHLAARHCLGFDNHQLRLLEELCKWRDTTAREEDESFPYVAPLEVLFGIVRARDKARS 510
            S+  I++PQ  F D  IDNS+ PFV                  R +   N    L  L +   N +    HPYE EI    ++    E  L  VT  + K ++ TP  ++ST  EL  ++ +LK    IAVD+E+HS RSFQGFTCL+QISTR++DF+ID L L+  +H  L  +FTD   VKV HGAD DV WL+RDFG+YVVNMFDTGQAA+LL     SLA+LL H+C +   + KKFQLADWR RPLP EM +YAR DTHYLLY++DR++ +L     +N  LL  A++RS  V  K++ K  F       L  +     ++ QL  L ELC WRD  AR EDES  YV P  ++  I     + RS
Sbjct:  153 SAKTIQRPQAKFKDK-IDNSNCPFVP-----------------RISEKPNSIKPLAILPEIGENGETTYSHPYEFEI----EKFEILEHTLVSVTPKIPKPLRETPLHYISTLSELHKMISKLKTCIEIAVDLEHHSYRSFQGFTCLMQISTREDDFIIDTLELRSELH-CLNEVFTDPKVVKVFHGADMDVVWLQRDFGVYVVNMFDTGQAAKLLNFAHFSLAYLLKHYCGLE--TNKKFQLADWRMRPLPDEMVQYAREDTHYLLYVYDRMKNDLISKGNANNNLLRCAFDRSRQVCLKKYEKPLFSESSYLSLVKKSKTILNSRQLFALRELCAWRDKIARLEDESTGYVLPNHMILHIAEVLPRNRS 498          
BLAST of Ggra8317.t1 vs. uniprot
Match: Q4RVM3 ((spotted green pufferfish) hypothetical protein (Fragment) n=1 Tax=Tetraodon nigroviridis TaxID=99883 RepID=Q4RVM3_TETNG)

HSP 1 Score: 271 bits (693), Expect = 4.560e-77
Identity = 184/491 (37.47%), Postives = 268/491 (54.58%), Query Frame = 0
Query:   77 CSSH--SSGSLSLRDSMFDQTAETTDEALQHFNIALDRARKISIAVVP--PQGALCSK---TSAPRVGIGNLGRSHGSSL----DIEKPQIHFPDYPIDNSDAPFVAP-YARDHYSDP-----ANPHANKRKTPSQNVETYLRELYKKNSNPD--IDQ-RHPYENEIVSSMQEMSTKEFKLEQVTVYKSMQSTPCTFVSTEEELFNVVERLKKASAIAVDIENHSVRSFQGFTCLIQISTRKEDFVIDALRLKGSIHRALAPIFTDEATVKVLHGADRDVQWLERDFGIYVVNMFDTGQAARLLKLPSASLAFLLSHFCDVSGSSKKKFQLADWRQRPLPKEMFKYARSDTHYLLYIFDRLRCEL-----SNKRLLGKAWERSAIVSRKRHRKARFEPGIAKHLAARHCLGFDNHQLRLLEELCKWRDTTAREEDESFPYVAPLEVLFGIVRARDKARSVEGLLKHGFPDGIIPPLVYQNAKKLTELIGDA 542
            C SH  +  +L+ ++  FD   ++ D  L+   I LD A  ++    P  P G    K   +S  R G G+ GRS    L    ++ +PQ+ F +  +DNS+ PF+   + + +   P      N   +K K    +V   L +   +    +  +D   HPY+ E+   M  +        +  +YK +  T C+F++T EEL  + E+L + S  AVD+E+HS RSF G TCL+QISTR+EDF+ID L L+  ++  L   FTD A VKV HGAD D++WL+RDFG+YVV +FDT QA+R L L   SL  LL+HFC+V+  S K++QLADWR RPLP+EM +YAR+DTHYLLYI+D +R +L         LL   W+RS  +S K++ K  F       L  +    F+  QL     L  WRD  AR+EDES  YV P  ++  I  + +  +  +G++    P   +PPLV Q   +L  L+  A
Sbjct:   64 CRSHMMNQNTLTGQEDRFDLMVDSNDAILERVGILLDEADGVNRTQGPVMPAGFQPPKIVVSSWNRKGSGSGGRSEMFRLLHAKNVARPQLKFKEK-VDNSNTPFIPKIFIKPNAVKPLPSYFTNKQMHKEKPEDLDVPAALADFIHQQRTQENVVDMCAHPYQYELDHLM--IPESLLSKSEPQLYKPVAETKCSFITTLEELAALNEKLCQLSEFAVDLEHHSYRSFLGITCLMQISTREEDFIIDTLELRSEMY-ILNEAFTDPAIVKVFHGADSDIEWLQRDFGLYVVRLFDTHQASRALNLARHSLDHLLTHFCNVA--SDKRYQLADWRIRPLPEEMVQYARADTHYLLYIYDCVRAQLLDFNHGQPGLLKSVWDRSRDISLKKYMKPIFTEESYLELQRKQKKSFNTQQLAAFRLLFAWRDKLARQEDESTGYVLPTHMMIKI--SEELPKEPQGIIACCNP---VPPLVRQQVNELHLLVQQA 543          
BLAST of Ggra8317.t1 vs. uniprot
Match: exosome component 10-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0016045BEE (exosome component 10-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0016045BEE)

HSP 1 Score: 274 bits (700), Expect = 1.460e-76
Identity = 168/412 (40.78%), Postives = 238/412 (57.77%), Query Frame = 0
Query:  150 DIEKPQIHFPDYPIDNSDAPFVAPYARDHYSDPANP---------HANKRKTPSQNVETYLRELYKKNSNPDIDQRHPYENEIVSSMQEMSTKEFKLEQVTVYKSMQSTPCTFVSTEEELFNVVERLKKASAIAVDIENHSVRSFQGFTCLIQISTRKEDFVIDALRLKGSIHRALAPIFTDEATVKVLHGADRDVQWLERDFGIYVVNMFDTGQAARLLKLPSASLAFLLSHFCDVSGSSKKKFQLADWRQRPLPKEMFKYARSDTHYLLYIFDRLRCELSNK-----RLLGKAWERSAIVSRKRHRKARFEPGIAKHLAARHCLGFDNHQLRLLEELCKWRDTTAREEDESFPYVAPLEVLFGIVRARDKARSVEGLLKHGFPDGIIPPLVYQNAKKLTELIGDALDAKI 547
            +IE+PQ+ F D  IDNS+ PF+ P  R H  +   P         H      P+   +   R+       P     HPY+ E+     + + ++   +Q    K + +TP T V+T EEL ++ ++L   S  AVD+E+HS RSFQGFTCL+Q+STR  D+++D L L+  +H  L   FTD   VKV HGAD D+QWL+RDFG+YVVNMFDTGQA+ +L LP  SLA+LL  +CDV     KK+QLADWR RPLP EM +YAR DTHYLL+I+D +R EL ++      LL    ERS  V  +R++K  +      +L  +H   F++ QL  +  + +WRDT AR+EDES  YV P  +L  +V A    + ++G+     P   +PPLV Q+ + +  L+  A D  +
Sbjct:  168 NIERPQLKFKDK-IDNSNTPFI-PIIR-HKPNAHRPLPKYDQQKRHPEDLDVPAALADFIHRQREVHQGQPADLTAHPYQYELEHF--QPTPQQLLKKQPQPSKPIDATPLTLVTTLEELMDMNDKLTMCSEFAVDLEHHSYRSFQGFTCLMQVSTRDHDYIVDTLALRADLH-VLNDTFTDPKVVKVFHGADMDIQWLQRDFGVYVVNMFDTGQASHVLGLPRHSLAYLLKTYCDVEPD--KKYQLADWRIRPLPSEMTQYAREDTHYLLHIYDCMRSELLDRGNNEANLLHNTLERSRQVCLQRYQKLLYTEDSYLNLLNKHKKTFNSQQLHAVRLVYRWRDTIARQEDESTGYVLPNHML--LVLAETLPKQIQGVFACCNP---VPPLVRQHIEDVHRLLVQARDVPL 566          
The following BLAST results are available for this feature:
BLAST of Ggra8317.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHG16.560e-29552.85Exosome component 10 n=1 Tax=Gracilariopsis chorda... [more]
R7Q3D81.430e-18651.68Exosome component 10 Rrp6 n=1 Tax=Chondrus crispus... [more]
A0A7S2ZEH58.360e-8736.48Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
M2XKN41.080e-8236.30Exosome complex exonuclease RRP6 n=1 Tax=Galdieria... [more]
A0A151ZD763.650e-7836.563'-5' exonuclease n=1 Tax=Tieghemostelium lacteum ... [more]
exosome component 10-like n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015A8C1DC1.200e-7739.02exosome component 10-like n=1 Tax=Stegodyphus dumi... [more]
A0A4Y2GUB01.790e-7739.15Exosome component 10 n=1 Tax=Araneus ventricosus T... [more]
A0A3S3P7492.650e-7744.47Exosome component 10-like protein (Fragment) n=2 T... [more]
Q4RVM34.560e-7737.47(spotted green pufferfish) hypothetical protein (F... [more]
exosome component 10-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0016045BEE1.460e-7640.78exosome component 10-like n=1 Tax=Branchiostoma fl... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 768..788
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 901..921
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 747..783
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 870..900
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 761..780
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 831..921
NoneNo IPR availablePANTHERPTHR12124:SF47EXOSOME COMPONENT 10coord: 25..900
NoneNo IPR availableCDDcd06147Rrp6p_like_exocoord: 247..430
e-value: 1.75875E-99
score: 307.217
IPR0025623'-5' exonuclease domainSMARTSM0047435exoneu6coord: 251..422
e-value: 1.8E-36
score: 137.2
IPR0025623'-5' exonuclease domainPFAMPF01612DNA_pol_A_exo1coord: 253..421
e-value: 2.0E-41
score: 141.7
IPR044876HRDC domain superfamilyGENE3D1.10.150.80HRDC domaincoord: 455..550
e-value: 9.9E-20
score: 72.2
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 146..454
e-value: 1.9E-88
score: 298.4
IPR002121HRDC domainPFAMPF00570HRDCcoord: 467..505
e-value: 3.4E-6
score: 26.9
IPR045092Exosome complex exonuclease Rrp6-likePANTHERPTHR12124POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATEDcoord: 25..900
IPR010997HRDC-like superfamilySUPERFAMILY47819HRDC-likecoord: 461..545
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 204..448

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000958_piloncontigtig00000958_pilon:160163..162928 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8317.t1Ggra8317.t1Gracilaria gracilis GNS1m malemRNAtig00000958_pilon 160163..162928 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8317.t1 ID=Ggra8317.t1|Name=Ggra8317.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=922bp
MDGSNSKQVCAEVLKALERAIRCSQPLPRRDELQLIRVTSPELKEKGNKL
TEQVLSEIKSVASRYAVSILSSDSDSCSSHSSGSLSLRDSMFDQTAETTD
EALQHFNIALDRARKISIAVVPPQGALCSKTSAPRVGIGNLGRSHGSSLD
IEKPQIHFPDYPIDNSDAPFVAPYARDHYSDPANPHANKRKTPSQNVETY
LRELYKKNSNPDIDQRHPYENEIVSSMQEMSTKEFKLEQVTVYKSMQSTP
CTFVSTEEELFNVVERLKKASAIAVDIENHSVRSFQGFTCLIQISTRKED
FVIDALRLKGSIHRALAPIFTDEATVKVLHGADRDVQWLERDFGIYVVNM
FDTGQAARLLKLPSASLAFLLSHFCDVSGSSKKKFQLADWRQRPLPKEMF
KYARSDTHYLLYIFDRLRCELSNKRLLGKAWERSAIVSRKRHRKARFEPG
IAKHLAARHCLGFDNHQLRLLEELCKWRDTTAREEDESFPYVAPLEVLFG
IVRARDKARSVEGLLKHGFPDGIIPPLVYQNAKKLTELIGDALDAKIDGA
ADDKCRSVGHSEELPVQKQDDLKDKSVLIKARIVAEGQPKGSVGSSSQSS
IVPKTGASFTSSGMSGVQAPTKKQIVSKQEKELLSEGPKLKVISTSKSAL
LDSESESDSDSVGHVECSNAEHLDQSIAPNIGKGVEYIRTGELYLKDEYE
SEGHGSKAVWRVGSPECITERDEFSEGKGKGEVESLQPFVRAANHSIFDL
SDNSDDEQQGISEEATDKHSVEDKIASAKAEIAKDQAQRQASLILCADTD
GAERNDYKKKIKRDIQPVEERTDVIEEVISLREEARRAESSGSKKRKRKE
KLKPSQEQPLPIPAFDYENAIAKKEQKKKAIRRPDQYDPMRKLRGEREPG
VKRRVKKRRRGRAQSMSFKAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0025623'-5'_exonuclease_dom
IPR044876HRDC_dom_sf
IPR036397RNaseH_sf
IPR002121HRDC_dom
IPR045092Rrp6-like
IPR010997HRDC-like_sf
IPR012337RNaseH-like_sf