Ggra8307.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8307.t1
Unique NameGgra8307.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length297
Homology
BLAST of Ggra8307.t1 vs. uniprot
Match: A0A2V3J4R4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4R4_9FLOR)

HSP 1 Score: 84.0 bits (206), Expect = 2.250e-15
Identity = 79/248 (31.85%), Postives = 123/248 (49.60%), Query Frame = 0
Query:    4 TYQEVVVPEQLSFPVRKVMIPENANIIIMRASYSTGDQAKQFQNPEHIHVLSDGTRNRAEIRKQDLKGSFRKKVWRSQGANRRKENAGKRKRYHISRSTESFTEKQARLSKRRSCYAARKFRTQDKDTEFSEDISLNSMSGSTLDESYTPSRSVLELPSTLSSSPSVSSASSWCSNAQSVQNNSKGSKATSEELSNIIRTDSQSSEC-HAKESASEKVQDKYLYELHVETKVFNIYNHLLIPVDTVPE 250
            +Y E++VP+ + FP+ KV +P NA ++++ A     +      +PE +H +S+   N A+     L  S RK +WR +G NR  EN   R RY  +   ES  E+++RL+KRR+ YA  K    D D E SED + +              RS    P+T SS     S+S + S+++     S  S   SE   ++    S++ +C  A +   +    +Y+YE  VETKV   Y H L PV  +P+
Sbjct:    9 SYVEIMVPQSVQFPLNKVWLPGNAEVLVVNAVLP--NNRNNDADPEVVHTVSEKQGNVAKPTASRLSASIRKTLWRERGNNRANENERNRSRYRKAVLNESQIERKSRLAKRRARYA-HKHSNLDID-EQSEDNTWSK-------------RSQSSAPNTESSK----SSSQYSSDSEL----SLISNGVSELEGSVTSQSSRAEQCLEATDRDPDDDIKQYVYESRVETKVLKNYIHYLKPVHKLPQ 231          
BLAST of Ggra8307.t1 vs. uniprot
Match: A0A2V3IRZ8 (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRZ8_9FLOR)

HSP 1 Score: 71.2 bits (173), Expect = 9.850e-11
Identity = 73/250 (29.20%), Postives = 118/250 (47.20%), Query Frame = 0
Query:    4 TYQEVVVPEQLSFPVRKVMIPENANIIIMRASYSTGDQAKQFQNPEHIHVLSDGTRNRAEIRKQDLKGSFRKKVWRSQGANRRKENAGKRKRYHISRSTESFTEKQARLSKRRSCYAARKFRTQDKDTEFSEDISLNSMSGSTLDESYTPSRSVLELPSTLSSSPSVSSASSWCSNAQSVQNNSKGSKATSEELSNIIRTDSQSSECHAKESASEKVQD--KYLYELHVETKVFNIYNHLLIPVDTVPEN 251
            +Y E++VP+ + FP+ KV +  NA ++++ A     +      +PE +H +S+   N A+     L  S RK + R +G  R  EN   R RY  +   ES  E+++RL+KRR+ YA  K    D D E SED + +  S     +S  P+    +  S  SS   +S  S+  S                 EL   + + S  +E + + +  +   +  +Y+YE+ VETKV     H L PV  +P+N
Sbjct:    9 SYVEIMVPQSVQFPLNKVWLQGNAEVLVVNAVLP--NNRNNDADPELVHTVSEKQGNVAKPTASRLSASIRKALCRERGNKRANENERNRSRYRKAVLNESQIERKSRLAKRRARYA-HKHSNLDID-EQSEDNTWSKRS-----QSSAPNTESSKSSSQYSSDSELSLISNGVS-----------------ELEGSVTSQSSRAEQYLEVTDRDPDDEIKQYVYEIRVETKVLKNCIHYLKPVHKLPQN 232          
The following BLAST results are available for this feature:
BLAST of Ggra8307.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J4R42.250e-1531.85Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IRZ89.850e-1129.20Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 267..296
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..109
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 277..296
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000958_piloncontigtig00000958_pilon:135115..136005 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8307.t1Ggra8307.t1Gracilaria gracilis GNS1m malemRNAtig00000958_pilon 135115..136005 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8307.t1 ID=Ggra8307.t1|Name=Ggra8307.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=297bp
MHSTYQEVVVPEQLSFPVRKVMIPENANIIIMRASYSTGDQAKQFQNPEH
IHVLSDGTRNRAEIRKQDLKGSFRKKVWRSQGANRRKENAGKRKRYHISR
STESFTEKQARLSKRRSCYAARKFRTQDKDTEFSEDISLNSMSGSTLDES
YTPSRSVLELPSTLSSSPSVSSASSWCSNAQSVQNNSKGSKATSEELSNI
IRTDSQSSECHAKESASEKVQDKYLYELHVETKVFNIYNHLLIPVDTVPE
NVGAVVVDVDRGSGPPKFCQRPLGISEPDSAPSSSDLENQDLNGYE*
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