Ggra8293.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8293.t1
Unique NameGgra8293.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length126
Homology
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BLAST of Ggra8293.t1 vs. uniprot
Match: A0A2V3ICP6 (Vegetative incompatibility protein HET-E-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICP6_9FLOR)

HSP 1 Score: 80.9 bits (198), Expect = 2.820e-15
Identity = 41/118 (34.75%), Postives = 66/118 (55.93%), Query Frame = 0 
Query:    8 SELLSVVERLEITVNKFFQRKDIAHDNVHTLRRLERKYNDAINLCRELEAVSDTDRITDVTLKHHHATLEDNCETLRKLHADVDHATMVRHVRRMKQILERCETDVEEFFEFLNNNVA 125
            + ++ V+  L+  V +   R ++A DN  TL RL++ Y DA N+ +  E +  T+ I    L H    L+ N E L +    V+  T +  V+RMKQIL++CE D  EF++FL  +V+
Sbjct:   11 ASVVKVLSELDKLVGRLVVRSNVAQDNAETLHRLDQLYKDAANVLQAPEHIPSTNFIITDRLGHFETLLQQNAEKLEEWRTSVETGTFMNRVQRMKQILDKCEKDATEFYQFLMEHVS 128
The following BLAST results are available for this feature:
BLAST of Ggra8293.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ICP62.820e-1534.75Vegetative incompatibility protein HET-E-1 n=1 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 38..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000958_piloncontigtig00000958_pilon:5443..5820 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8293.t1Ggra8293.t1Gracilaria gracilis GNS1m malemRNAtig00000958_pilon 5443..5820 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8293.t1 ID=Ggra8293.t1|Name=Ggra8293.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=126bp
MQSVLTFSELLSVVERLEITVNKFFQRKDIAHDNVHTLRRLERKYNDAIN
LCRELEAVSDTDRITDVTLKHHHATLEDNCETLRKLHADVDHATMVRHVR
RMKQILERCETDVEEFFEFLNNNVA*
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