Ggra8290.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8290.t1
Unique NameGgra8290.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length317
Homology
BLAST of Ggra8290.t1 vs. uniprot
Match: A0A2V3II26 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II26_9FLOR)

HSP 1 Score: 364 bits (935), Expect = 1.160e-117
Identity = 178/318 (55.97%), Postives = 235/318 (73.90%), Query Frame = 0
Query:    1 MKDWSRQELVDEVASHDESLDRQIPTPEKSQVSDDFKGALRNLKRVCEMTAGFVRLGIPLTRTIGVKSDTTEKEGLFSLGLMLRILLSAFGNRLYAEVGEIITELVSVIPDSDWPRFRLEAAKYLLSITSRFHLHIELVAHLIPQKFERPRYLALDLAFLSFTQWFRGPSKDPVPQRAIEYQASGKAKAVGLNTRSYCLADIVELLKFLPEIDKNTNCTWAWLLSYQLRLVLSEPAPFQKRDPAELSDLDNAVKMLRSCAQRLAFDVAFTHMKVELYMLLVTYRAYGATSHESMATILPNIRPEKEQETL--SFAKKT 316
            M DW + ++V  V+   E LD QIPT E+ Q  D+FK ALRNL+R C++ A F++LG+P+ R IGVKS    ++ L S+GL+ R+LLSAFGNRLY EVGEIITE++  IP++ WP +RL  AKY+LSIT R  LH+ELVA+LIP   ER RYLALD +FLS++QW RGP  +P P+   ++Q S +AK VG+  RSYCLAD+V+LL+ +PEIDK T+C WAWL+SYQLRL+LSEP  ++KRD  ELS L+  V+ LR+C  R+AFDV    M++EL  L+ T+RA+G  S + MA ILPN+R EK+QETL   FA+KT
Sbjct:  420 MPDWLKPKVVGNVSLEVECLDSQIPTAEEPQPPDNFKIALRNLRRACKLAAAFIKLGLPIERAIGVKSVPLGQQVLLSIGLVTRLLLSAFGNRLYVEVGEIITEVLKRIPEAIWPAYRLRLAKYMLSITPRLELHVELVANLIPFTSERTRYLALDYSFLSYSQWCRGPGSNPQPRSVDDFQPSERAKTVGIKVRSYCLADVVDLLRQMPEIDKETDCIWAWLISYQLRLILSEPGVYKKRDSGELSALNQLVQKLRTCTNRMAFDVPVQDMRIELDTLVKTFRAFGCASRDGMAEILPNLRAEKKQETLVSMFAEKT 737          
BLAST of Ggra8290.t1 vs. uniprot
Match: R7QJS0 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJS0_CHOCR)

HSP 1 Score: 201 bits (512), Expect = 1.220e-59
Identity = 111/274 (40.51%), Postives = 156/274 (56.93%), Query Frame = 0
Query:   39 ALRNLKRVCEMTAGFVRLGIPLTRTIGVK--SDTTEKEGLFSLGLMLRILLSAFGNRLYAEVGEIITELVSVIPDSDWPRFRLEAAKYLLSITSRFHLHIELVAHLIPQKFERPRYLALDLAFLSFTQWFRGPSKDPVPQRAIEYQASGKAKAVGLNTRSYCLADIVELLKFLPEIDKNTNCTWAWLLSYQLRLVLSEPAPFQKRDPAELSDLDNAVKMLRSCAQRLAFDVAFTHMKVELYMLLVTYRAYGATSHESMATILPNIRPEKEQETL 310
            A RNLKR     A  VRL   L R I  K      EK  L++LG+ +R+LLS FG RL  EVG ++  ++S + +  W  FR  AAKY+LSIT+R  LH+ELVAHL+P   +R R LALD+ FLS  QW  GP   P  +    ++ S  AKA G+   S+CLAD+ +L K +P+  K TN  WA  ++  L+ +L++    ++RD  EL+ +  ++  LRSCA RL F +A   M++ L  LL+  R     +   ++ I P  R EK Q  L
Sbjct:   16 ATRNLKRAFIYAASRVRLNDKLHRIISRKIYKQDREKSILYTLGVCVRVLLSVFGARLATEVGYLVAAVLSRVNEKHWASFRRTAAKYILSITTRLGLHVELVAHLLPYHTDRARSLALDVGFLSLMQWSCGPGDSPKTREIHAWEPSSSAKAAGVGVISFCLADLADLAKHIPDFQKTTNVEWACGIARMLKQILADQTTLERRDNGELNAIHQSLTKLRSCAHRLEFGLAVQEMRLALDALLLALRELVGKTRSGISEISPKARFEKVQTHL 289          
BLAST of Ggra8290.t1 vs. uniprot
Match: A0A2V3IUH8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUH8_9FLOR)

HSP 1 Score: 57.4 bits (137), Expect = 2.280e-7
Identity = 31/66 (46.97%), Postives = 41/66 (62.12%), Query Frame = 0
Query:  253 VKMLRSCAQRLAFDVAFTHMKVELYMLLVTYRAYGATSHESMATILPNIRPEKEQETLS--FAKKT 316
            ++ LR C     FDV    M++EL  L  T+RA    S + MA ILPNIR EK+Q+T++  FAKKT
Sbjct:    1 MQKLRKCTDCTEFDVRVHRMRIELDTLAKTFRASECASRDGMAKILPNIREEKKQDTITSMFAKKT 66          
The following BLAST results are available for this feature:
BLAST of Ggra8290.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3II261.160e-11755.97Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QJS01.220e-5940.51Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IUH82.280e-746.97Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000179_piloncontigtig00000179_pilon:276578..277528 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8290.t1Ggra8290.t1Gracilaria gracilis GNS1m malemRNAtig00000179_pilon 276578..277528 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8290.t1 ID=Ggra8290.t1|Name=Ggra8290.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=317bp
MKDWSRQELVDEVASHDESLDRQIPTPEKSQVSDDFKGALRNLKRVCEMT
AGFVRLGIPLTRTIGVKSDTTEKEGLFSLGLMLRILLSAFGNRLYAEVGE
IITELVSVIPDSDWPRFRLEAAKYLLSITSRFHLHIELVAHLIPQKFERP
RYLALDLAFLSFTQWFRGPSKDPVPQRAIEYQASGKAKAVGLNTRSYCLA
DIVELLKFLPEIDKNTNCTWAWLLSYQLRLVLSEPAPFQKRDPAELSDLD
NAVKMLRSCAQRLAFDVAFTHMKVELYMLLVTYRAYGATSHESMATILPN
IRPEKEQETLSFAKKT*
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