Ggra8287.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8287.t1
Unique NameGgra8287.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length330
Homology
[Close]
BLAST of Ggra8287.t1 vs. uniprot
Match: A0A2V3IDH8 (Ig-like domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDH8_9FLOR)

HSP 1 Score: 94.0 bits (232), Expect = 4.940e-18
Identity = 94/355 (26.48%), Postives = 149/355 (41.97%), Query Frame = 0 
Query:   17 SNKEANLFANAKAQLPVKLYVATGGTTVTACGISSKKTVNDCYVQSPASTYLLPNVFLKSKDVE---------------------------------GDVSATTRR-----ELMGWVTVEDFKSAPTDTTTETVTIFTCMDAETNGQNMLFYDSSIGVSLKGKPKILVQENSFGSSTFGHEE-MDGATVYQYYADYGAYESSYTFVLDSFTWGIYDDGVKQDYFVPANLEPHND---------NIFEFGFKASKSGVNTVARALSHGNMTNGRITQILNHGGSKWYEFETENAIM-SASAFHLVDAGLANGLCDNHWHTYELHITVFDKYGGKTVASVSPSLDSSHG---GKARL 319
            SN  A LF N K QLPV +Y           GI +++TV     +  +S + LP+     +  E                                 GD  ++        ELM + T E       D+    +T+F+CM         +  ++ I V+L  KP I +   ++ ++ F  ++ ++  T YQY A Y     S T   ++ T  I D   ++D   P N    N            ++FGF+  K GVN VARA++HG +  G +TQ ++HG   +Y F+ +     SA++F + +  L N L  + W       TV D YGG +   ++P LDS +    G AR+
Sbjct:   16 SNVGAKLFGNQKTQLPVTVYYDVNNGRAVEAGIVARETVTTQPEEVNSSDFSLPSEINAGEVAEAQRRYKSHPDNVPQLGEEGTGPTWDGRYFFNLTGDYKSSDSHSEKIVELMAYCTFEANNGGEGDS----ITVFSCMYVS---GTPIDNNNYITVTLTPKPSIDI---TWETAAFEEDQKLNECTYYQYVASYKDSSYSCTVDFENSTTTIEDKDDRRD--KPLNYLTTNPVTGTDVGSGGFYDFGFRGGKGGVNKVARAIAHGFVAAGTVTQQMDHGDKLFYSFKRDGTCFGSAASFWVKNGYLPNSLAGHEWFDENYVYTVMDIYGGISKLVLTPDLDSDNDTGHGHARI 358
The following BLAST results are available for this feature:
BLAST of Ggra8287.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IDH84.940e-1826.48Ig-like domain-containing protein n=1 Tax=Gracilar... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000179_piloncontigtig00000179_pilon:264238..265337 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8287.t1Ggra8287.t1Gracilaria gracilis GNS1m malemRNAtig00000179_pilon 264238..265337 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8287.t1 ID=Ggra8287.t1|Name=Ggra8287.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=330bp
MTSVSISFYVSESATGSNKEANLFANAKAQLPVKLYVATGGTTVTACGIS
SKKTVNDCYVQSPASTYLLPNVFLKSKDVEGDVSATTRRELMGWVTVEDF
KSAPTDTTTETVTIFTCMDAETNGQNMLFYDSSIGVSLKGKPKILVQENS
FGSSTFGHEEMDGATVYQYYADYGAYESSYTFVLDSFTWGIYDDGVKQDY
FVPANLEPHNDNIFEFGFKASKSGVNTVARALSHGNMTNGRITQILNHGG
SKWYEFETENAIMSASAFHLVDAGLANGLCDNHWHTYELHITVFDKYGGK
TVASVSPSLDSSHGGKARLLTVQNIEQNA*
back to top