Ggra8265.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8265.t1
Unique NameGgra8265.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length373
Homology
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BLAST of Ggra8265.t1 vs. uniprot
Match: A0A2V3J7G5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J7G5_9FLOR)

HSP 1 Score: 321 bits (823), Expect = 2.740e-104
Identity = 189/366 (51.64%), Postives = 243/366 (66.39%), Query Frame = 0 
Query:    1 MVRYLKNWIERIEDQKALNRFVAVEILLARLHFPVSVCFALGVLAQTGLVPYIAPHEWRLVFIASFFPTIANGRDLIHGIRHFHQTPPTENDSFRSLYPVDKNEISIAGGQMQTLGAFAFTLGSVSLLNASIIALIRDGPVSHEVSRRQYAASFALFLIGSGANGVFFRGMPPSLESYRVLVSFQNLLAAATLCTASVLLLPDIGAENNMSAFQTSLLTILSCFGCMMLVMSSIVNYFHTVGYCTL---HREGYKLFIAERNSQFGRRSKRMAAWETVKGLLWSGKSAWWKRRK--LNRRRARYVSSTSLE-------RSVDEENQGVEDDADSEPSASSVSLTSGSSSNESFSTAYDEETGSRSS 354
            MVR+L++  E I+++K+L+ FVA EI+LARLHFP++VCF++G+LAQTGLVPY APHEW+ V IAS F T+ANGRDL H IR   QT P E D+  SL     N+   AGG MQ L AFA TLGSVSLLNASII + RD   S  + RRQ+A+SFALFLIGSGAN +        LE  R+LV FQN+LA+ATL  ASVL+LP IG E   S+FQ SL + LS  G ++L+MSSIVNYF+TV YCT    + E + L  A   ++ G + +R+  WE VK L WSG+S WWKRRK  + +R  R  S+  ++       R +  E+   E D+    S+S +S ++ SSS  SFS+ YDEE G  SS
Sbjct:    1 MVRFLRSCFEIIDNKKSLDWFVASEIMLARLHFPIAVCFSIGILAQTGLVPYAAPHEWKFVLIASLFLTLANGRDLNHCIRALFQTEPREEDAVTSLGLTTWNDSGSAGGHMQLLSAFALTLGSVSLLNASIIGIARDSEGSSNICRRQFASSFALFLIGSGANNIPVNKKAQRLECTRILVGFQNILASATLSVASVLMLPGIGGEKTTSSFQLSLTSALSGIGSILLIMSSIVNYFYTVAYCTRQCEYLESFCLAHAHEKAEVGAKRRRLMTWERVKSLFWSGRSNWWKRRKPVVRKRLRRNASNNRIDQYDPGGTRIILSESSEFEMDS----SSSLLSRSASSSSYSSFSSLYDEEQGRESS 362
The following BLAST results are available for this feature:
BLAST of Ggra8265.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J7G52.740e-10451.64Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 357..372
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 320..351
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 352..372
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 309..372
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 115..136
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..46
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 202..212
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 239..372
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 137..147
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 180..201
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 78..114
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 58..77
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 148..168
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 47..57
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 169..179
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 213..238
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availableTMHMMTMhelixcoord: 180..202
NoneNo IPR availableTMHMMTMhelixcoord: 217..239
NoneNo IPR availableTMHMMTMhelixcoord: 151..168
NoneNo IPR availableTMHMMTMhelixcoord: 58..77
NoneNo IPR availableTMHMMTMhelixcoord: 21..43
NoneNo IPR availableTMHMMTMhelixcoord: 114..136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000179_piloncontigtig00000179_pilon:41371..42489 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8265.t1Ggra8265.t1Gracilaria gracilis GNS1m malemRNAtig00000179_pilon 41371..42489 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8265.t1 ID=Ggra8265.t1|Name=Ggra8265.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=373bp
MVRYLKNWIERIEDQKALNRFVAVEILLARLHFPVSVCFALGVLAQTGLV
PYIAPHEWRLVFIASFFPTIANGRDLIHGIRHFHQTPPTENDSFRSLYPV
DKNEISIAGGQMQTLGAFAFTLGSVSLLNASIIALIRDGPVSHEVSRRQY
AASFALFLIGSGANGVFFRGMPPSLESYRVLVSFQNLLAAATLCTASVLL
LPDIGAENNMSAFQTSLLTILSCFGCMMLVMSSIVNYFHTVGYCTLHREG
YKLFIAERNSQFGRRSKRMAAWETVKGLLWSGKSAWWKRRKLNRRRARYV
SSTSLERSVDEENQGVEDDADSEPSASSVSLTSGSSSNESFSTAYDEETG
SRSSFVSEEAEDERAKANRERE*
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