Ggra8260.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8260.t1
Unique NameGgra8260.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length521
Homology
BLAST of Ggra8260.t1 vs. uniprot
Match: A0A1C5J0K9 (von Willebrand factor type A domain-containing protein n=1 Tax=Micromonospora siamensis TaxID=299152 RepID=A0A1C5J0K9_9ACTN)

HSP 1 Score: 130 bits (328), Expect = 3.810e-29
Identity = 87/277 (31.41%), Postives = 132/277 (47.65%), Query Frame = 0
Query:  100 WSFKPTETGTVKVQFPYIRANGASGDFCCGSIQGE---IEYGSGKVTEKFNADMSAKEGEDIALVIDSTGSMGDDIDKVREVSRSIVSSAFAAGPSTRFAVIEYNDPYSNVVLPLSSNQADIIDAIDSGFEVTGGGDFREHAFSGILDAINLDWRTCAVRSSIVMGDAPPKDPEPGTGLTEELILEAANSVDLTTNTDPFTFSRRVLNTTSRQLVVSGERIRVKVPGAHPLSMILIGTNGATEKSFETLADGSKGKLYRANGAEDIVEVLTEAISES 373
            W+   T +G ++V FP I     +G  C G        I+      + +    ++ +   D+A VID+TGSMG  ID V+  + SIV+   +   + R AV++YNDPY+ VV   SS+ + I  AI+S    +GGGD  E  +SG++ A+ L WR  A RS IV+GDA  KDPEPGTG T   +  A N   +   + P   S+      S                          ++ A   SF+ L+ G+ G +Y A  +  +V+ +  A+  S
Sbjct:  117 WARVVTNSGLIEVSFPLIEVI-TTGGICFGLFPRSSIFIDPADPSASLRVQVALNERTANDLAFVIDTTGSMGGSIDAVKASAVSIVNRLASQSSNFRVAVVQYNDPYAGVVSGFSSDVSTITAAINS-LGASGGGDTPEFTYSGVMSALGLPWRDSANRSMIVIGDAAAKDPEPGTGYTMASVTAAVNQRRIQVGSGPTLASKATAR--SXXXXXXXXXXXXXXXXXXXXXXXXXXSDPAALTSFQGLSAGTLGTVYPAADSTGVVDAINRAVDRS 389          
BLAST of Ggra8260.t1 vs. uniprot
Match: A0A2M8PPE0 (VWFA domain-containing protein n=1 Tax=Candidatus Thermofonsia Clade 2 bacterium TaxID=2364211 RepID=A0A2M8PPE0_9CHLR)

HSP 1 Score: 129 bits (325), Expect = 9.450e-29
Identity = 103/327 (31.50%), Postives = 154/327 (47.09%), Query Frame = 0
Query:   71 YTVGSSVEPISTPGNGAGLTADTLLYRDKWSF---------KPTETGTVKVQFPYIRANGASGDFCCGSIQGEI--EYGSGKVTEKFNADMSA---KEGE--DIALVIDSTGSMGDDIDKVREVSRSIVSSAFAAGPSTRFAVIEYND---PY--------SNVVLPLSSNQADIIDAIDSGFEVTGGGDFREHAFSGILDAINLDWRTCAVRSSIVMGDAPPKDPEPGTGLTEELILEAANSVDLTTNTDPFTFSRRVLNTTSRQLVVSGERIRVKVPGAHPLSMILIGTNGATEKSFETLADGSKGKLYRANGAEDIVEVLTEAI 370
            YT+ S V   S P     LT +   + D+W +         +  E+    + F     N   GD C   I  +I   Y +  + E F++D+S+   + G+  D+  VID+TGSM DDID V+  + +++++  A+G   R  ++ Y D   PY        SN  LP SSN ++I +AI++      GGD  E  FSG++ AI   WR  A +  I+MGDAPP DPEP TG ++  +L AA  VD                                    +P   ILI  N  T  +F+ LADG+ G+L+ A  + ++V+VL E I
Sbjct:   57 YTINSPVPGTSAPFPS--LTGNFSNFDDRWEWITSSILPDWRAYESNPDNIGF----INEQLGDICNLPIGIDIISGYRNSPLVEIFSSDLSSVDLQSGDLFDLIFVIDTTGSMADDIDAVKREAVNVINAVAASGNDWRIGIVTYRDHGPPYGVPNDAYVSNEELPFSSNASEITNAINAITVRQAGGDEAEAVFSGLMTAIEFPWRDGAQKVIILMGDAPPHDPEPVTGFSQFDVLRAAFEVD--------------------------------PANVYP---ILIENNRQTRNAFQALADGTSGRLFNAQASGEVVDVLIETI 342          
BLAST of Ggra8260.t1 vs. uniprot
Match: R1HIG5 (Na-Ca exchanger/integrin-beta4 n=2 Tax=Amycolatopsis vancoresmycina TaxID=208444 RepID=R1HIG5_9PSEU)

HSP 1 Score: 127 bits (320), Expect = 1.340e-27
Identity = 77/226 (34.07%), Postives = 115/226 (50.88%), Query Frame = 0
Query:  149 DMSAKEGEDIALVIDSTGSMGDDIDKVREVSRSIVSSAFAAGPSTRFAVIEYNDP----YSNVVLPLSSNQADIIDAIDSGFEVTGGGDFREHAFSGILDAINLDWRTCAVRSSIVMGDAPPKDPEPGTGLTEELILEAANSVDLTTNTDPFTFSRRVLNTTSRQLVVSGERIRVKVPGAHPLSMILIGTNGATEKSFETLADGSKGKLYRANGAEDIVEVLTEAI 370
            D+   E  D+A V+DSTGSM DDID  R     +    F    S R ++++Y D      + V +P + ++ + IDA++ G  V GGGD  E  FSG++ A    WR  A++ +I++GDAP KDPEP TG T+  +L+AA  +D                                      ++ IL+G   AT  SFE LADGSKG++Y +  A D+V+ + +A+
Sbjct:  255 DLRPTEKVDVAFVVDSTGSMADDIDAARASISRVTDEIFGVAKSARVSLVDYKDVDDSYQARVDVPFTESKTEFIDAVN-GIVVDGGGDDPESIFSGLMAAYAQKWRPGALKLTILIGDAPAKDPEPRTGYTQAQVLKAAKELDPVV-----------------------------------INPILVGGKEATRTSFEKLADGSKGQVYSSATAADLVKAIDDAM 444          
BLAST of Ggra8260.t1 vs. uniprot
Match: A0A2M8PRI0 (VWFA domain-containing protein n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A2M8PRI0_9CHLR)

HSP 1 Score: 118 bits (295), Expect = 1.750e-24
Identity = 80/232 (34.48%), Postives = 111/232 (47.84%), Query Frame = 0
Query:  157 DIALVIDSTGSMGDDIDKVREVSRSIVSSAFAAGPSTRFAVIEYND----PY-------SNVVLPLSSNQADIIDAIDSGFEVTGGGDFREHAFSGILDAINLDWRTCAVRSSIVMGDAPPKDPEPGTGLTEELILEAANSVDLTTNTDPFTFSRRVLNTTSRQLVVSGERIRVKVPGAHPLSMILIGTNGATEKSFETLADGSKGKLYRANGAEDIVEVLTEAISESIPDP 377
            D+  VID+T SM DDID V+  + +++++  A+G   R  ++ Y D    PY       S V    S +Q  I  AI+ G  V GGGD RE  FSG++ AI   WR  A +  I+MGDAPP DPEP TG + +  L+AA +VD   N  P                                  ILI  N  T  +F+ LADGS G+L+ A  + ++V+ +   I     DP
Sbjct:  283 DLIFVIDTTSSMEDDIDAVKREAVNVINAVAASGNDWRIGIVTYRDQPISPYGEPGDYVSRVETGFSIDQGAITTAIN-GITVAGGGDAREAVFSGLMTAIEFPWRDGAQKVIILMGDAPPHDPEPVTGFSRDSTLQAAFNVD-PANVFP----------------------------------ILIENNEDTRAAFQALADGSSGRLFNAQSSAEVVDTILATIGSVTGDP 478          
BLAST of Ggra8260.t1 vs. uniprot
Match: A0A846LPV8 (Mg-chelatase subunit ChlD n=1 Tax=Modestobacter marinus TaxID=477641 RepID=A0A846LPV8_9ACTN)

HSP 1 Score: 111 bits (278), Expect = 3.050e-22
Identity = 72/218 (33.03%), Postives = 111/218 (50.92%), Query Frame = 0
Query:  157 DIALVIDSTGSMGDDIDKVREVSRSIVSSAFAAGPSTRFAVIEYND---PY-SNVVLPLSSNQADIIDAIDSGFEVTGGGDFREHAFSGILDAINLDWRTCAVRSSIVMGDAPPKDPEPGTGLTEELILEAANSVDLTTNTDPFTFSRRVLNTTSRQLVVSGERIRVKVPGAHPLSMILIGTNGATEKSFETLADGSKGKLYRANGAEDIVEVLTEAI 370
            D+  V+D+TGSMGDDID  +    ++  + F    S R A++ Y D   PY + V  P ++++A    A+++    +GGGD+ E  +SG++ +  LDWR  A++ +IV+GDAP  +PEPGTG T E +L  A  +D             V+N     +VV GE   V                     SF  LADGS G+++ A  A ++V  +  A+
Sbjct:  258 DVTFVVDTTGSMGDDIDAAQTSITAVTDALFGVAASPRVALVNYKDLGDPYQARVDAPFTADRAAFAAAVNT-LGASGGGDYPESVYSGLMTSFGLDWRPGALKLAIVIGDAPAHNPEPGTGYTLEQVLRTAFELDPV-----------VIN----PIVVGGEATAVA--------------------SFTELADGSGGQVFDAANAGEVVTAIEAAV 439          
BLAST of Ggra8260.t1 vs. uniprot
Match: VWA domain-containing protein n=1 Tax=Hydrococcus rivularis TaxID=1616834 RepID=UPI0009FA7BCC (VWA domain-containing protein n=1 Tax=Hydrococcus rivularis TaxID=1616834 RepID=UPI0009FA7BCC)

HSP 1 Score: 106 bits (264), Expect = 3.090e-21
Identity = 80/241 (33.20%), Postives = 125/241 (51.87%), Query Frame = 0
Query:  157 DIALVIDSTGSMGDDIDKVREVSRSIVSSAFAAGPSTRFAVIEYND------------PYSNVVLPLSSNQADIIDAIDSGFEVTGGGDFREHAFSGILDAINLD----WRTCAVRSSIVMGDAPPKDPEPGTGLTEELILEAA-NSVDLTTNTD--PFTFSRRVLNTTSRQLVVSGERIRVKVPGAHPLSMILIGTNGATEKSFETLADGSKGKLYRA-NGAEDIVEVLTEAISESIPDP 377
            D+AL+ D+TGSM DD+D+V+  +  IV+  FA  P +R A+ +Y D            PY N VLP S    +I  AI+S   +  GGD+ E A+SG+++ I  +    WR  A ++ I+  DAPP DPEP T  T + I++AA N V + TN+   P   +    +  S  L      I    P +  +  + +G + +    +  L++ + GKLY + N  + + EVL + I + I DP
Sbjct:  127 DLALLFDTTGSMWDDLDQVKNSATDIVNQLFADIPDSRVAIADYRDFPSDIYGNYGDYPY-NAVLPFSDKLTNITSAINS-VAIGDGGDWSESAYSGLVNVIKGNGIGGWRDEAKKAIILFTDAPPHDPEPFTSYTAQSIIDAAKNPVTIQTNSSIIPSFGNSHGFSPFSASLTSISNSISTTSPVS--IYSVFLGNDSSGSDYYSKLSEKTGGKLYTSYNIVDSLFEVLKD-IKKDISDP 362          
BLAST of Ggra8260.t1 vs. uniprot
Match: A0A661QN35 (Uncharacterized protein n=2 Tax=Bacteria TaxID=2 RepID=A0A661QN35_9DELT)

HSP 1 Score: 106 bits (264), Expect = 1.020e-20
Identity = 76/238 (31.93%), Postives = 115/238 (48.32%), Query Frame = 0
Query:  155 GEDIALVIDSTGSMGDDIDKVREVSRSIVSSAFAAGPSTRFAVIEYND----PYS-------NVVLPLSSNQADIIDAIDSGFEVTGGGDFREHAFSGILDAINLD----WRTCAVRSSIVMGDAPPKDPEPGTGLTEELILEAANSVDLTTNTDPFTFSRRVLNTTSRQLVVSGERIRVKVPGAHPLSMILIGTNGATEKSFETLADGSKGKLYRANGAEDIVEVLTEAISESIPDP 377
            G D+   ID+TGSM DDI  V+  +  IV++  +   + R AV++Y D    PY        NV LP S++++ II AI  G  +  G D++E  +S ++ +IN +    WR    ++ I+MGDAPP DPEP TG T   ++ AA +VD  T                                   +  I IG +  T   FE LA+G+ G+++ A  A ++V+ L EAI   +  P
Sbjct:  195 GIDLIFTIDTTGSMWDDIAYVKTAATEIVNNIDSKICNYRIAVVDYRDFPVSPYGGSDDYPYNVRLPFSNDKSSIISAIQ-GLSLGWGADWQESVYSALIRSINTEGLGAWRDNVKKTIILMGDAPPHDPEPFTGYTLSDVIAAAAAVDPAT-----------------------------------IYPIFIGRSSITRSYFEALAEGTGGEVFEAARASEVVDALLEAIEAILKAP 396          
BLAST of Ggra8260.t1 vs. uniprot
Match: A0A6B3MDQ9 (VWA domain-containing protein n=1 Tax=Symploca sp. SIO2E9 TaxID=2607812 RepID=A0A6B3MDQ9_9CYAN)

HSP 1 Score: 105 bits (263), Expect = 2.620e-20
Identity = 83/250 (33.20%), Postives = 129/250 (51.60%), Query Frame = 0
Query:  150 MSAKEGEDIALVIDSTGSMGDDIDKVREVSRSIVSSAFAAGPS---TRFAVIEYNDPYSNVVLP------LSSNQADIIDAIDSGFEVTGGGDFREHAFSGILDAINL---DWRTCAV-RSSIVMGDAPPKDPEPGTGLTEELILEAANSVDLTTNTD-----PFTF--SRRVLNTTSRQLVVSGERIRVKVPGAHPLS-----MILIGTNGATEKSFETLADGSKGKLYRANGAEDIVEVLTEAISESI 374
            ++ + G+DIA VID+TGSM DDID V+  +  I+++ F        +R AV+ YNDP +N  L       +   ++  ++AI+S   V+GGGDF E   +G++ A++    +WR  A+ R  I+ GDAPPKD E         +LE A++V  + +TD     P +     +  N TS   V S         G   ++      ILIG +  T   FE+LA  + G+ + A  A ++V+VL EAI   +
Sbjct:  300 INLRPGQDIAFVIDTTGSMADDIDAVKTRANEIINAIFDGERGFLDSRIAVVGYNDPGTNTFLSFTDQPKIDDRKSAALNAINS-ISVSGGGDFPEVVNAGLIRALSGGAGEWREEAIARRIILFGDAPPKDTE-----LRAQVLELASNVGASIDTDISDVAPLSIVGDIQTRNITSDLAVTSLAVASASAEGTPTITPVEIFTILIGDDPTTSADFESLATATGGETFTAVDASEVVDVLIEAIESPV 543          
BLAST of Ggra8260.t1 vs. uniprot
Match: A0A7X6VHC7 (VWA domain-containing protein n=1 Tax=Clostridiaceae bacterium TaxID=1898204 RepID=A0A7X6VHC7_9CLOT)

HSP 1 Score: 101 bits (251), Expect = 3.310e-20
Identity = 80/238 (33.61%), Postives = 122/238 (51.26%), Query Frame = 0
Query:  157 DIALVIDSTGSMGDDIDKVREVSRSIVSSAFAAGPSTRFAVIEYND-----------PYSNVVLPLSSNQADIIDAIDSGFEVTGGGDFREHAFSGILDAIN-LDWRTCAVRSSIVMGDAPPKDPEPGTGLTEELIL------EAANSVDLTTNTDPFTFSRRVLNTTSRQLVVSGERIRVKVPGAHPLSMILIGTNGATEKSFETLADGSKGKLYRANGAEDIVEVLTEAISESIPD 376
            D+A VID+TGSM DDID+V+   R+ +     +  + R AV++Y D           PY  V L  +SN   I++AI++   +  GGD  E   S ++D ++ L WR+ A ++ I+MGDAP  DPEP TG T+++ +      + A   DL   T    FS  +   TS Q     +R RV        ++  I T+  +   F+ LA G+ G  Y A  + DI +++ E I + IPD
Sbjct:   35 DLAFVIDTTGSMSDDIDEVKRNMRAYLGDLDESRMNYRVAVVDYRDFPERTGYSGDYPYC-VQLNFTSNYESILEAINN-LNLGNGGDVNETICSALIDGLSELSWRSDAGKAVILMGDAPALDPEPITGYTKDMAIKKLLYNDTAYEEDLHARTA--LFSGALSGVTSMQ---DTQRSRV--------TLFAIATSSYSVSGFDYLATGTGGTSYVAGDSADISDIIREII-DIIPD 256          
BLAST of Ggra8260.t1 vs. uniprot
Match: A0A7X7Q7D9 (VWA domain-containing protein n=1 Tax=Propionibacterium sp. TaxID=1977903 RepID=A0A7X7Q7D9_9ACTN)

HSP 1 Score: 103 bits (257), Expect = 7.030e-20
Identity = 70/231 (30.30%), Postives = 110/231 (47.62%), Query Frame = 0
Query:  157 DIALVIDSTGSMGDDIDKVREVSRSIVSSAFAAGPSTRFAVIEYNDPYSN----------VVLPLSSNQADIIDAIDSGFEVTGGGDFREHAFSGILDAINLDWRTCAVRSSIVMGDAPPKDPEPGTGLTEELILEAANSVDLTTNTDPFTFSRRVLNTTSRQLVVSGERIRVKVPGAHPLSMILIGTNGATEKSFETLADGSKGKLYRANGAEDIVEVLTEAISESIPDP 377
            D+   ID+TGSM DDI  VR    SI ++      + R+A++ Y D  S+          V L  +S+ A +  A+D+  E+  GGD  E  +SGI   ++L WR    ++ +V+GDAPPKDPEP TG T + + + A +VD                                     P+ + L+ T+ A + S  +L D + G ++R  G+EDI +   EA+S+ +  P
Sbjct:  143 DVVFTIDTTGSMSDDIAAVRANVHSIAAAVQERAGTVRYALVTYQDHPSDGGGPDDYPSRVDLDFTSDVAALQAAVDA-IELGYGGDDAESVYSGIDAGLSLAWRPGVRKTMLVLGDAPPKDPEPVTGFTWQDMADRAFAVD-------------------------------------PVQIYLVDTSSAADASMTSLVDETGGIVFRVGGSEDIADSFVEAVSDVLDKP 335          
The following BLAST results are available for this feature:
BLAST of Ggra8260.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1C5J0K93.810e-2931.41von Willebrand factor type A domain-containing pro... [more]
A0A2M8PPE09.450e-2931.50VWFA domain-containing protein n=1 Tax=Candidatus ... [more]
R1HIG51.340e-2734.07Na-Ca exchanger/integrin-beta4 n=2 Tax=Amycolatops... [more]
A0A2M8PRI01.750e-2434.48VWFA domain-containing protein n=2 Tax=Chloroflexi... [more]
A0A846LPV83.050e-2233.03Mg-chelatase subunit ChlD n=1 Tax=Modestobacter ma... [more]
VWA domain-containing protein n=1 Tax=Hydrococcus rivularis TaxID=1616834 RepID=UPI0009FA7BCC3.090e-2133.20VWA domain-containing protein n=1 Tax=Hydrococcus ... [more]
A0A661QN351.020e-2031.93Uncharacterized protein n=2 Tax=Bacteria TaxID=2 R... [more]
A0A6B3MDQ92.620e-2033.20VWA domain-containing protein n=1 Tax=Symploca sp.... [more]
A0A7X6VHC73.310e-2033.61VWA domain-containing protein n=1 Tax=Clostridiace... [more]
A0A7X7Q7D97.030e-2030.30VWA domain-containing protein n=1 Tax=Propionibact... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002035von Willebrand factor, type APFAMPF00092VWAcoord: 157..232
e-value: 5.9E-7
score: 29.9
IPR002035von Willebrand factor, type APROSITEPS50234VWFAcoord: 157..374
score: 10.939674
IPR036465von Willebrand factor A-like domain superfamilyGENE3D3.40.50.410von Willebrand factor, type A domaincoord: 157..297
e-value: 5.2E-18
score: 67.7
IPR036465von Willebrand factor A-like domain superfamilySUPERFAMILY53300vWA-likecoord: 157..368
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 368..408
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 373..408
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..520
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..24
NoneNo IPR availableCDDcd00198vWFAcoord: 157..283
e-value: 1.90867E-9
score: 54.4942

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000179_piloncontigtig00000179_pilon:29326..30888 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8260.t1Ggra8260.t1Gracilaria gracilis GNS1m malemRNAtig00000179_pilon 29326..30888 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8260.t1 ID=Ggra8260.t1|Name=Ggra8260.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=521bp
MKVSVLSTALFLLGFVASLHLSEACGRITLTLKAPNNPNGKLKVNLRVKL
NKNGPEAFEETLSSVDVSGVYTVGSSVEPISTPGNGAGLTADTLLYRDKW
SFKPTETGTVKVQFPYIRANGASGDFCCGSIQGEIEYGSGKVTEKFNADM
SAKEGEDIALVIDSTGSMGDDIDKVREVSRSIVSSAFAAGPSTRFAVIEY
NDPYSNVVLPLSSNQADIIDAIDSGFEVTGGGDFREHAFSGILDAINLDW
RTCAVRSSIVMGDAPPKDPEPGTGLTEELILEAANSVDLTTNTDPFTFSR
RVLNTTSRQLVVSGERIRVKVPGAHPLSMILIGTNGATEKSFETLADGSK
GKLYRANGAEDIVEVLTEAISESIPDPTPSPSASASPSASASPSASASPP
PEITNTDDLVASLQCGSTGDPEFKVLITNPNPFPVKFSWRDFVSGSDGSG
VVEPPSTIVSVKNEGNLVFSLSWEQVENDRFKTKVFPFASVPLCVAVAPS
GIDVATPGLTGLSPVFGGAV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002035VWF_A
IPR036465vWFA_dom_sf