Ggra826.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra826.t1 vs. uniprot
Match: A0A2V3IRS4 (Exosome complex component RRP46 n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRS4_9FLOR) HSP 1 Score: 383 bits (983), Expect = 3.820e-132 Identity = 197/262 (75.19%), Postives = 231/262 (88.17%), Query Frame = 0
Query: 4 MDIDTPPFRGQGTGVDATLGMKTETSAGRRDGRSQGEMRAMTASHGELSRADGSARIRLGGTDVIVGIYGPMDCPHNKQQVEALHVHVAYRRRERMGSSLSGADATVSNESVLTRDLQATVTDVVLAALHPRKAVVVAVQVLSDSGGVVAAAINATTMALLDAGLAMRALPLAASVSIHNNALIVDPVLVEEREAHAVVTITIDTALEKDDGFMSVYTIGDCGGEEIFAAAVAVCRQLVVKTRAFLRLSLEQKAAIRHIWNA 265
MD D+ FRG+G+GVDA LGM+TE++AGRRDGRS GEMRAM+ S+GEL+RADGSAR+RLG TDV+V IYGP++CPHNKQ EA+HVHVA+ RRE M S+++GA+ ES++TRDL+A V+DVVLA LHPRKAVVVAVQVL+DSGGV+ AAINATT+AL+DAGL +RALPLAASVSIHNNA+IVDPV+VEEREA AVV I DTALE DDGFMSVYT+GDCGGEE+FAA V VCRQLVVKTRAF RLSLE+KAA+ HIWNA
Sbjct: 1 MDADSLSFRGEGSGVDAMLGMRTESTAGRRDGRSHGEMRAMSVSYGELTRADGSARVRLGTTDVLVAIYGPIECPHNKQDAEAVHVHVAFGRREAM-SNVAGAETGAGTESMITRDLEALVSDVVLATLHPRKAVVVAVQVLADSGGVICAAINATTIALIDAGLPLRALPLAASVSIHNNAIIVDPVVVEEREADAVVCIVFDTALENDDGFMSVYTMGDCGGEELFAATVEVCRQLVVKTRAFFRLSLERKAAVHHIWNA 261
BLAST of Ggra826.t1 vs. uniprot
Match: R7Q866 (Exosome component 5 Rrp46 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q866_CHOCR) HSP 1 Score: 276 bits (707), Expect = 5.020e-90 Identity = 151/263 (57.41%), Postives = 188/263 (71.48%), Query Frame = 0
Query: 7 DTPPFRGQGTGVDATLGMKTETSAGRRDGRSQGEMRAMTASHGELSRADGSARIRLGGTDVIVGIYGPMDCPHNKQQVEALHVHVAYRRRERM---GSSLSGADATVSNESVLTRDLQATVTDVVLAALHPRKAVVVAVQVLSDSGGVVAAAINATTMALLDAGLAMRALPLAASVSIHNNALIVDPVLVEEREAHAVVTITIDTALEKDDGFMSVYTIGDCGGEEIFAAAVAVCRQLVVKTRAFLRLSLEQKAAIRHIWNAS 266
D F G GTGVDA G T SAGRRDGRS EMR+++ SHG L ADGSAR+RLG TDV+V +YGPM CP +Q E +HV VA+RRR G+ G E++ RDL+ V ++V+A LHPRKA VVAVQVL+D+GGV+AAAIN T MAL+DAG+ MRA+P AASVS++N A++VDPVL+EE EA V+T DT+L ++GFMSVYT GDC G+ +FAAA+ R L +KT AFL+LSLEQKAA R WN +
Sbjct: 12 DALEFSGVGTGVDAMSG--TPLSAGRRDGRSASEMRSLSISHGPLVAADGSARVRLGATDVVVAVYGPMGCPVPRQDAEQMHVSVAFRRRAGTTSGGAGGKGDSINAGKEAIAGRDLKKVVEEIVMAILHPRKAAVVAVQVLADNGGVIAAAINGTVMALVDAGMPMRAVPSAASVSLYNGAIVVDPVLIEEVEADGVITFVFDTSLADENGFMSVYTDGDCTGDSMFAAALETSRDLALKTMAFLKLSLEQKAAQRLTWNTT 272
BLAST of Ggra826.t1 vs. uniprot
Match: exosome complex component RRP41-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DA4FB (exosome complex component RRP41-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DA4FB) HSP 1 Score: 199 bits (507), Expect = 6.970e-60 Identity = 116/245 (47.35%), Postives = 160/245 (65.31%), Query Frame = 0
Query: 13 GQGTGVDATLGMKTETSAGRRDGRSQGEMRAMTASHGELSRADGSARIRLGGTDVIVGIYGPMDCPHNKQQVEALHVHVAYRRRERMGSSLSGADAT---VSNESVLTRDLQATVTDVVLAALHPRKAVVVAVQVLSDSGGVVAAAINATTMALLDAGLAMRALPLAASVSIHNNALIVDPVLVEEREAHAVVTITIDTALEKDDGFMSVYTIGDCGGEEIFAAAVAVCRQLVVKTRAFLRLSLE 254
G G+G DA LG+ T AGRRDGR G MR ++A+ G+L R DGS+RIR+G TDV+V +YGPM+CP ++Q V+ VHV++R SS A AT + E+V RDL+ V V+ LHPRKA+ +AV VLSD GG AAAINAT +AL+DAG+++R++ AA V++HNNA+IVDP VEE EA AV+T+T +T + Y G G E + +AV R++ TR F+ L+++
Sbjct: 17 GGGSGSDAALGICTSQRAGRRDGRGAGTMREISATQGDLLRCDGSSRIRIGLTDVLVAVYGPMECPVHRQLVDRADVHVSFRHHA--SSSTMNAFATRKSLPGEAVAARDLREIVLQSVIVKLHPRKAIAIAVHVLSDDGGASAAAINATFLALVDAGVSLRSVLTAACVTVHNNAIIVDPEAVEEAEADAVITLTFETKKGTSANVVGSYCHGVLGSYENYQSAVQTARKISDGTREFMELAVK 259
BLAST of Ggra826.t1 vs. uniprot
Match: D7FVT2 (RNase_PH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVT2_ECTSI) HSP 1 Score: 109 bits (272), Expect = 2.790e-25 Identity = 81/230 (35.22%), Postives = 125/230 (54.35%), Query Frame = 0
Query: 32 RRDGRSQGEMRAMTASHGELSRADGSARIRLGGTDVIVGIYGPMDCPHNK-QQVEALHVHVAYRRRERMGSSLSGADATVSNESVLTRDLQATVTDVVLAALHPRKAVVVAVQVLSDSGGVVAAAINATTMALLDAGLAMRALPLAAS----VSIHNNALIVDPVLVEEREAHAVVTITIDTALEKDDGFMSVYTIGDCGGEEIFAAAVAVCRQLVVKTRAFLRLSLEQK 256
RRDGR ++R + A G L+RADGSAR G T V+ +YGP + ++ E + V+++ + SS ADA +E++L R L+ +VVL + +PR V V +QV+ D G V++AA+NA TMALL+AG+ M + L+ + ++ ++++DP EE +A A + L G +S + +G EE FA A R+F+RLS EQK
Sbjct: 5 RRDGRRANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKSLRMERSEGATLDVSFKPESGITSS---ADA--ESEALLRRSLE----EVVLRSRYPRTVVSVIIQVIVDDGAVLSAALNAATMALLNAGVEMTGMALSVTCCITATVSGRSVLLDPCKAEEIDAAATAVVA---TLSAGGGVLSCHAVGSMSQEEYFACCEAASLGTTA-VRSFVRLSAEQK 221
BLAST of Ggra826.t1 vs. uniprot
Match: A0A835ZF16 (Ribosomal protein S5 domain 2-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF16_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 2.320e-21 Identity = 79/243 (32.51%), Postives = 120/243 (49.38%), Query Frame = 0
Query: 32 RRDGRSQGEMRAMTASHGELSRADGSARIRLGGTDVIVGIYGPMD-CPHNKQQVEALHVHVAYRRRERMGSSLSGADATVSNESVLTRDLQATVTDVVLAALHPRKAVVVAVQVLSDSGGVVAAAINATTMALLDAGLAMRALPLAASVSIHNNA-----------------LIVDPVLVEEREAHAVVTITIDTALEKDDGFMSVYTIGDCGGEEIFAAAVAVCRQLVVKTRAFLRLSLEQK 256
R DGR+ ++R + A G L+RADGS R G T V+V +YGP K++ + + V++R + GA + E L ++ T+ + V A +PR + V VQVL D G V++AAINA MAL+DAG+ M +P+AA+ + L +DP EE A V + + L DG +++ G G EE+FAA+ A R+ +LR ++E K
Sbjct: 6 RFDGRTGDQIRGLFADQGILNRADGSVRFGAGNTSVLVAVYGPAQPAQQKKEKPDRAIIEVSWRADK-------GAQTSADAERELY--VRRTLEEAVAVARYPRSVISVVVQVLCDDGSVLSAAINACAMALVDAGVEMIGMPVAATACFSGSGSAAAAAPEQLQHLGESHLQLDPSASEEATTRATVMLAV---LAGSDGILTMKMTGQLGAEELFAASEAA-RKACDAVSVYLRRAVEAK 235
BLAST of Ggra826.t1 vs. uniprot
Match: A0A1Y2CMS4 (Ribosomal protein S5 domain 2-like protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2CMS4_9FUNG) HSP 1 Score: 97.8 bits (242), Expect = 5.270e-21 Identity = 70/231 (30.30%), Postives = 122/231 (52.81%), Query Frame = 0
Query: 29 SAGRRDGRSQGEMRAMTASHGELSRADGSARIRLGGTDVIVGIYGPMDCPHNKQQVEALHVHVAYRRRERMGSSLSGADATVSNESVLTRDLQATVTDVVLAALHPRKAVVVAVQVLSDSGGVVAAAINATTMALLDAGLAMRALPLAASVSIH-NNALIVDPVLVEEREAHAVVTITIDTALEKDDGFMSVYTIGDCGGEEIFAAAVAVCRQLVVKTRAFLRLSLEQKAA 258
S GR D + ++R ++AS G LSRADGS+R G T+V+ ++GP + +++++ + ++ R + L + R L+ + VLA++HPR A+ V +QV D G ++AA+NA ++ALLDAG+A R L + +++ N L++DP L E A +V T T + +D ++ + ++ + A V +Q +F R ++EQK A
Sbjct: 3 SNGRTD---EHQLRPLSASFGVLSRADGSSRFGFGTTEVLASVFGPKEVRIRDEKIDSATLQISVRPLNGLSGPL---------HRLAERQLRDLIEAAVLASIHPRSAIQVTIQVTGDDGCFMSAAVNAASLALLDAGVAQRHLLASVTLAFDPNGTLLLDPSLKELETAKSVHTFTFSNS---NDAVIAGVSSEGVYSQDEYKQACTVAQQACATIHSFYRKTMEQKLA 218
BLAST of Ggra826.t1 vs. uniprot
Match: A0A2G4SM17 (Ribosomal protein S5 domain 2-like protein n=4 Tax=Rhizopus TaxID=4842 RepID=A0A2G4SM17_RHIZD) HSP 1 Score: 97.8 bits (242), Expect = 6.010e-21 Identity = 69/226 (30.53%), Postives = 110/226 (48.67%), Query Frame = 0
Query: 40 EMRAMTASHGELSRADGSARIRLGGTDVIVGIYGPMDCPHNKQQVEALHVHVAYRRRERMGSSLSGADATVSNESVLTRDLQATVTDVVLAALHPRKAVVVAVQVLSDSGGVVAAAINATTMALLDAGLAMRALPLAASVSIHN-NALIVDPVLVEEREAHAVVTITIDTALEKDDGFMSVYTIGDCGG---EEIFAAAVAVCRQLVVKTRAFLRLSLEQKAAIRH 261
++RA +A+ L RADGSAR LG T VI + GPM+ ++++ V V R + S+ E ++ L+ T ++L + PR V + VQ++ D G V+AAA+NA +ALLDAG+ ++ + + + I N +I+DP E A +V T D +S D G EE + +C Q V + +F+R ++E K H
Sbjct: 12 QLRAFSATQNVLHRADGSARFDLGATSVICSVSGPMEVQLRDEKLDEATVEVVVRPSSGIAST---------KEKLIENTLRTTFEPIILGGMMPRTLVQIVVQIIKDDGSVIAAAVNAIALALLDAGIPLKYMAASVTCMIDKTNNIILDPTAAELENAKSVHTFAFDNTPRTTTVLLS-----DSSGVFSEEEYIECYDLCHQAVGQVHSFIRAAVEAKKQKEH 223
BLAST of Ggra826.t1 vs. uniprot
Match: A0A6J3EMB3 (exosome complex component RRP46 n=3 Tax=Anseriformes TaxID=8826 RepID=A0A6J3EMB3_AYTFU) HSP 1 Score: 96.7 bits (239), Expect = 1.290e-20 Identity = 72/200 (36.00%), Postives = 106/200 (53.00%), Query Frame = 0
Query: 41 MRAMTASHGELSRADGSARIRLGGTDVIVGIYGPMDCPHNKQQVEALHVHVAYRRRERMGSSLSGADATVSNESVLTRDLQATVTDVVLAALHPRKAVVVAVQVLSDSGGVVAAAINATTMALLDAGLAMRALPLAASVSIH-NNALIVDPVLVEEREAHAVVTITIDTALEKDDGFMSVYTIGDCGGEEIFAAAVAVCR 239
+R + G LSR DGSA G T V+ G+YGP + +K+ E + V R + L G S E +L + +A VVL ALHPR A+ + +QVLSD+G +++ +NA M LLDAGL + AL + ++ A+++DP +E+EA AV+T ID+ +K + T G C EE+ VA R
Sbjct: 8 LRPFSCEQGLLSRPDGSAAFVQGDTSVLAGLYGPAEVRGSKESPERATLEVLLRPKV----GLPGVGER-SREQLLRQTCEA----VVLGALHPRTAITLVLQVLSDAGSLLSCCLNAACMGLLDAGLPLSALFCGVTCALDAQGAIVLDPTTRQEQEARAVLTFAIDSTEKK---VLMATTRGSCSVEEMQQCLVAAQR 195
BLAST of Ggra826.t1 vs. uniprot
Match: S2JKZ7 (Uncharacterized protein n=3 Tax=Mucor TaxID=4830 RepID=S2JKZ7_MUCC1) HSP 1 Score: 97.1 bits (240), Expect = 1.300e-20 Identity = 72/233 (30.90%), Postives = 118/233 (50.64%), Query Frame = 0
Query: 30 AGRRDGRSQG-EMRAMTASHGELSRADGSARIRLGGTDVIVGIYGPMDCPHNKQQVEALHVHVAYRRRERMGSSLSGADATVSNESVLTRDLQATVTDVVLAALHPRKAVVVAVQVLSDSGGVVAAAINATTMALLDAGLAMR--ALPLAASVSIHNNALIVDPVLVEEREAHAVVTITIDTALEKDDGFMSVYTIGDCGG---EEIFAAAVAVCRQLVVKTRAFLRLSLEQK 256
A R D R+ ++RA +AS L+RADGS++ G T VI + GPMD ++++ V V R + + ++ E ++ L+ V+L + PR V + +Q+ D G ++AA++NA T+ALLDAG+ M+ A + A + N L++DP VE A +V T D K +S D G E+ + + +C + V K + FLR+++E K
Sbjct: 2 ANRPDRRTDNTQLRAFSASQNILNRADGSSKFEFGSTSVICSVSGPMDVQIRDEKLDEATVEVVVRPAKGVATT---------REKLMESILRTAFEPVILGGMLPRTLVQIVIQITKDDGAILAASVNAITLALLDAGIPMKHMAAAITAMIDSKTNELVLDPTAVELENAKSVHTFAFDNVNTKPMVLLS-----DSEGLFSEDEYFSCHDLCFEAVEKVQGFLRVAVESK 220
BLAST of Ggra826.t1 vs. uniprot
Match: A0A8J6C8B2 (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C8B2_DIALT) HSP 1 Score: 97.1 bits (240), Expect = 1.300e-20 Identity = 64/177 (36.16%), Postives = 95/177 (53.67%), Query Frame = 0
Query: 32 RRDGRSQGEMRAMTASHGELSRADGSARIRLGGTDVIVGIYGPMDCPHNKQQVEALHVHVAYRRRERMGSSLSGADATVSNESVLTRDLQATVTDVVLAALHPRKAVVVAVQVLSDSGGVVAAAINATTMALLDAGLAMRALPLAASVSIHNN----ALIVDPVLVEEREAHAVVTI 204
RRDGRS +R M G L RADGSAR T V+V +YGP + ++++E V V R A + E + L +++ ALHPR A+ + VQ++ D G AAAINAT +AL+DAG+A+RA+P A ++++ + + ++DP EE A +TI
Sbjct: 6 RRDGRSAAMLRPMACERGVLRRADGSARYSHDLTSVLVAVYGPCEVKKRREELERATVEVIVR---------PPAGPPRAREREMEAQLHGLFAPLIVGALHPRTAISIVVQLVDDDGSACAAAINATAVALMDAGVALRAMPSAVALALGADGDAASALLDPCRSEEERAAGALTI 173 The following BLAST results are available for this feature:
BLAST of Ggra826.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra826.t1 ID=Ggra826.t1|Name=Ggra826.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=267bpback to top |