Ggra8243.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8243.t1
Unique NameGgra8243.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length128
Homology
BLAST of Ggra8243.t1 vs. uniprot
Match: A0A2V3J5T8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5T8_9FLOR)

HSP 1 Score: 192 bits (487), Expect = 5.120e-61
Identity = 90/127 (70.87%), Postives = 109/127 (85.83%), Query Frame = 0
Query:    2 IARSLLRVSSLQIRRGSTWASPRWSEAIRSQSNIDTPEDPPTQPLPEQHELGEGVSDFSNWVEKHEDVSSAQAIGGFVGVMGLCFFIHEYALARVKASEPTFTPREFPTAENYMPTWEDARH-VRKE 127
            ++R LLR S+ QIRR S WASPRWS A+R+QSNIDT +DPPT PLPEQHELGEGVSDFSNWVEKHEDVSSA+A+GGFV +MG+C+ IH+YA+ R K+S+PTFT REFPT + Y+PTW++A   VRKE
Sbjct:    1 MSRQLLRASA-QIRRASAWASPRWSRAVRAQSNIDTAQDPPTAPLPEQHELGEGVSDFSNWVEKHEDVSSAEAVGGFVFIMGVCYAIHQYAVNRTKSSDPTFTRREFPTVQTYLPTWKEAADSVRKE 126          
BLAST of Ggra8243.t1 vs. uniprot
Match: R7QSD6 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSD6_CHOCR)

HSP 1 Score: 114 bits (286), Expect = 3.870e-30
Identity = 57/127 (44.88%), Postives = 84/127 (66.14%), Query Frame = 0
Query:    7 LRVSS--LQIRRGSTWASP-----RWSEAIRSQSNIDTPEDPPTQPLPEQHELGEGVSDFSNWVEKHEDVSSAQAIGGFVGVMGLCFFIHEYALARVKASEPTFTPREFPTAENYMPTWEDARHVRK 126
            LR S+  L++R GS+  +P     +W+  +RS+SNI TP+DPP+ PLPE HELGEG +DF N+V+K+EDVS+ QA+ G   ++   F +++YA  + + S P FT REFP  +   PTW  +  VR+
Sbjct:   24 LRASARLLRVRHGSSGGAPTQLSAQWAAKVRSESNILTPDDPPSAPLPETHELGEGQADFCNFVDKYEDVSTLQAVTGLGSMLLFTFGVYKYATKQARESTPLFTRREFPHVQEDFPTWARSDEVRR 150          
BLAST of Ggra8243.t1 vs. uniprot
Match: A0A1X6P9Q2 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P9Q2_PORUM)

HSP 1 Score: 73.2 bits (178), Expect = 4.900e-14
Identity = 39/103 (37.86%), Postives = 53/103 (51.46%), Query Frame = 0
Query:   17 GST---WASPRWSEAIRSQSNIDTPEDPPTQPLPEQHELGEGVSDFSNWVEKHEDVSSAQAIGGFVGVMGLCFFIHEYALARVKASEPTFTPREFPTAENYMP 116
            GST   W   R+S+ +R+ S +   ++PPT PL E H+ GEGV DFSN+V+ HED   A A  G      +   ++    A    +   FT REFP  E   P
Sbjct:   26 GSTSHEWMPARFSQDVRAASRVVAVDEPPTAPLTESHDFGEGVCDFSNYVDAHEDTGLASAAAGLATFAAVLGGVYAAGQAHGAKTPDLFTRREFPFLEKDFP 128          
BLAST of Ggra8243.t1 vs. uniprot
Match: A0A7S0ZCS3 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZCS3_9RHOD)

HSP 1 Score: 64.3 bits (155), Expect = 2.770e-10
Identity = 39/104 (37.50%), Postives = 51/104 (49.04%), Query Frame = 0
Query:   16 RGSTWASP-----RWSEAIRSQSNIDTPEDPPTQPLPEQHELGEGVSDFSNWVEKHEDVSSAQAIGGFVGVMGLCFFIHEYALARVKA--SEPTFTPREFPTAE 112
            RG  W S      RWS  +R      T +DPPT PLPE+HEL EG SD+SNW + H D  S   +   V   G  + I+ ++  R +     P+FT    P  E
Sbjct:   39 RGEPWESAPVFSARWSRKMREDFGNTTVDDPPTGPLPEEHEL-EGYSDWSNWYDTHPDTPSIDVLYAMVLFFGPAYLIYLFSKWRGRKVFESPSFTLNCIPYDE 141          
BLAST of Ggra8243.t1 vs. uniprot
Match: A0A5J4Z8I4 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z8I4_PORPP)

HSP 1 Score: 57.0 bits (136), Expect = 1.840e-7
Identity = 36/92 (39.13%), Postives = 51/92 (55.43%), Query Frame = 0
Query:   22 SPRWSEAIRSQSNIDTPEDPPTQPLPEQHELGEGVSDFSNWVEKH--EDVSSAQAIGGFVGVMGLCFFIHEYA--LARVKASEPTFTPREFP 109
            S RWS  +R  S + TP +PPT PLP +HE+ +  SD S+  + +  E VS  Q +G FV   G  + +H Y+   A  +  +P FT RE P
Sbjct:   38 SLRWSARMRELSGVKTPTEPPTAPLPIEHEI-DFSSDLSSPYDINLVETVSGYQVVGAFVLFFGSFYILHLYSKHTAMPRYLDPQFTFRETP 128          
The following BLAST results are available for this feature:
BLAST of Ggra8243.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3J5T85.120e-6170.87Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QSD63.870e-3044.88Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6P9Q24.900e-1437.86Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S0ZCS32.770e-1037.50Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4Z8I41.840e-739.13Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000872_piloncontigtig00000872_pilon:234912..235295 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8243.t1Ggra8243.t1Gracilaria gracilis GNS1m malemRNAtig00000872_pilon 234912..235295 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8243.t1 ID=Ggra8243.t1|Name=Ggra8243.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=128bp
MIARSLLRVSSLQIRRGSTWASPRWSEAIRSQSNIDTPEDPPTQPLPEQH
ELGEGVSDFSNWVEKHEDVSSAQAIGGFVGVMGLCFFIHEYALARVKASE
PTFTPREFPTAENYMPTWEDARHVRKE*
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