Ggra8241.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8241.t1
Unique NameGgra8241.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length724
Homology
BLAST of Ggra8241.t1 vs. uniprot
Match: A0A2V3IC96 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IC96_9FLOR)

HSP 1 Score: 471 bits (1212), Expect = 3.210e-155
Identity = 241/592 (40.71%), Postives = 323/592 (54.56%), Query Frame = 0
Query:   21 CVTERSVADKYGTGNGCPVCPKDKVCAGPADNKVCVYPKAIADLTCEEGFCKVPKGKDCKPKGSVCVDXXXXXXXXXXXXXXXXXELRKPCGQDAFSVCRKELVCEGGFCKNPK---GGDCTARNSVCVDDTTCAGNDMEKKCVTPVDLRKKCGQNPFAVCKEGLVCEEGFC---KIPNRGNCAVENPLCVDDTVCAGNDMNKKCVTPVDLRKKCGQNSFAVCKEGLVCEEGFC---KIPNRGNCDVENPLCVDDTVCAGNDMNRKCVTPVDLRKKCGQNPFAVCKEGLVCEEGFC---KIPNRGNCDVDNPLCVDDTVCAGNDMNKKCVTPVDLRKKCGQNPFAVCKESLVCEEGFC---KIPNRGNCAVENPLCVDDTVCAGNDMNKKCVTPVDLRKKCGQNPFAVCKEGLVCEEGFC---KIPNRGNCDVDNPLCVDDTVCAGNDMNKKCVTPVDLRKKCGQNPFAVCKESLVCEEGFC---KIPMGGDCAVNNFLCVDDAICIGTDNIKRCVRPKDVRMPCGQNPFSVCKSDLVCEEGFC---KVPKDGDCNSKNSLCVDNTACVGSIRKRKCKMLKGMGQPCGNDPY 588
            C    +V   Y     C  CP++KVCAG    + CV P  +              GK C+                                 D F VC K L C+   C +      GDCT   S C   + CAG +  K CV P+ L  +CG+N F VC+ GL C +G C   K+P  GNC     +CVD TVCAG +  KKCVTP+ +  +CGQ+ F +C+ GL C +G C   KIP  G+C  E  +CVD TVCAG D  ++CVT + +  +CGQ+PF +C+ GL C +G C   KIP  G+C  +  +CVD T+CAG D  K+CVTP+ +  +CGQ+PF +C+  L C +G C   KIP  G+C  E  +CVD T+CAG D  K+CVTP+ +  +CGQ+PF +C+ GL C +G C   KIP  G+C  +  +CVD T+CAG D  K+CVTP+ +  +CGQ+PF +C+  L C +G C   KIP GGDC     +CVD  IC GTD  K+CV P  V   CGQ+PF +C+S LVCE G C   ++P  GDC  + S+        G    +KC    G G  CG DP+
Sbjct:   14 CAATPNVRTAYNPRRACQFCPENKVCAGRGRVRRCVTPMTV--------------GKSCRV--------------------------------DPFWVCAKGLKCQKNVCVDQSLIVRGDCTRPYSFCPRGSVCAGTEERKLCVQPIRLGSQCGKNQFFVCESGLECVDGICTAPKVPEGGNCLTARSVCVDGTVCAGTNTRKKCVTPMSVGGRCGQDPFWICEAGLDCVDGTCTKPKIPKGGDCLPEGSVCVDGTVCAGTDTKKQCVTLMSVGGRCGQDPFWICEAGLDCVDGTCTKPKIPKGGDCLPEGSVCVDGTICAGTDTKKQCVTPMSVGGRCGQDPFWICEAGLDCVDGTCTKPKIPKGGDCLPEGSVCVDGTICAGTDTKKQCVTPMSVGGRCGQDPFWICEAGLDCVDGTCTKPKIPKGGDCLPEGSVCVDGTICAGTDTKKQCVTPMSVGGRCGQDPFWICEAGLDCVDGTCTKPKIPKGGDCLPEGSVCVDGTICAGTDTKKQCVTPMSVGGRCGQDPFWICESGLVCEGGLCAKPRIPLGGDCKPEGSVXXXXXXXAGDNGLKKCVKGMGEGDRCGLDPF 559          
BLAST of Ggra8241.t1 vs. uniprot
Match: R7QQT1 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQT1_CHOCR)

HSP 1 Score: 108 bits (271), Expect = 4.120e-24
Identity = 56/145 (38.62%), Postives = 75/145 (51.72%), Query Frame = 0
Query:  110 PCGQDAFSVCRKELVCEGGFCKNP--KGGDCTARNSVCVDDTTCAGNDMEKKCVTPVDLRKKCGQNPFAVCKEGLVCEEGFC-KIPNRGN-CAVENPLCVDDTVCAGNDMNKKCVTPVDLRKKCGQNSFAVCKEGLVCEEGFCKI 250
            PCG+D F VCR  L C  G C     +G  C    SVC +  +C GN   KKC     +   CG++PF VC+ GL C +  C +  N G  C     LC + T C GN+ N+KC    +   +CG++ F VC+ GL C  G CK+
Sbjct:    2 PCGKDPFWVCRNGLRCLRGVCVRTIARGRSCNIPGSVCAEGLSCVGNLGNKKCFMRKPVGMPCGKDPFWVCRHGLRCIKNVCVRTVNVGQECNSPEALCPEGTSCVGNEGNRKCFAKKEAGMRCGKDPFWVCRNGLRCAGGICKV 146          
BLAST of Ggra8241.t1 vs. uniprot
Match: A0A2V3J6E7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6E7_9FLOR)

HSP 1 Score: 102 bits (255), Expect = 1.330e-20
Identity = 65/207 (31.40%), Postives = 91/207 (43.96%), Query Frame = 0
Query:  111 CGQDAFSVCRKELVCEGGFCK--NPKGGDCTARNSVCVDDTTCAGNDMEKKCVTPVDLRKKCGQN-PFAVCKEGLVCEEGFCK---IPNRGNCAVENPLCVDDTVCAGNDMNKKCVTPVDLRKKCGQNS-FAVCKEGLVCEEGFC-KIPNRG-NCDVENPLCVDDTVCAGNDMNRKCVTPVDLRKKCGQNPFAVCKEGLVC-EEGFC 307
            CG D F +C   L C+   C     +G  C    +VC     C GN+ + KC         C ++ PF VC+E L C  G CK   I   G C  +N +C D   C G    + C     L + C Q   + VC++ L C +  C ++   G +C  E+ LC     C G++  RKC       ++CG +PF  C   L C E G C
Sbjct:   65 CGLDPFWMCEDSLSCQNSTCVFIGHEGDRCNGSTAVCAGKLRCIGNEGDTKCFMKQYKGGLCPEDEPFWVCREELSCVNGVCKQVNIMEGGECNTDNEVCADGLHCIGEPWRRNCFRKQGLGEACPQEDPYFVCEQTLSCVDELCVRVVGEGEDCGEEDVLCEHGLQCVGDNGARKCFAGRAEGERCGLDPFWACAPPLRCAENGVC 271          
BLAST of Ggra8241.t1 vs. uniprot
Match: Q7XZ47 (Crumbs protein 95F (Fragment) n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XZ47_GRIJA)

HSP 1 Score: 97.1 bits (240), Expect = 4.270e-19
Identity = 47/117 (40.17%), Postives = 66/117 (56.41%), Query Frame = 0
Query:  111 CGQDAFSVCRKELVCEGGFCKNPKGGDCTARNSVCVDDTTCAGNDMEKKCVTPVDLRKKCGQNPFAVCKEGLVCEEGFCK---IPNRGNCAVENPLCVDDTVCAGNDMNKK-CVTPV 223
            CG D F VC+K L CE   CK P+GG+C  ++S+CV+ T CAG   +K+CV P     +C ++PF +C +GL C+  +C    +P   NC      C  D +CAG    K+ C  PV
Sbjct:   96 CGVDPFWVCKKGLECEDYKCKVPRGGNCKPKDSICVNGTKCAGKKWKKRCVRPRGPGARC-KHPFWICNDGLWCDGRWCAGSDLPEGANCRSNESTCAKDLICAGKPGRKRICAKPV 211          
The following BLAST results are available for this feature:
BLAST of Ggra8241.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IC963.210e-15540.71Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QQT14.120e-2438.62Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3J6E71.330e-2031.40Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
Q7XZ474.270e-1940.17Crumbs protein 95F (Fragment) n=1 Tax=Griffithsia ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..723

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000872_piloncontigtig00000872_pilon:225206..228506 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8241.t1Ggra8241.t1Gracilaria gracilis GNS1m malemRNAtig00000872_pilon 225206..228506 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8241.t1 ID=Ggra8241.t1|Name=Ggra8241.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=724bp
MMAFAVLKFVIFLSLYSSVFCVTERSVADKYGTGNGCPVCPKDKVCAGPA
DNKVCVYPKAIADLTCEEGFCKVPKGKDCKPKGSVCVDGSVCTGTDTRKK
CVAPKELRKPCGQDAFSVCRKELVCEGGFCKNPKGGDCTARNSVCVDDTT
CAGNDMEKKCVTPVDLRKKCGQNPFAVCKEGLVCEEGFCKIPNRGNCAVE
NPLCVDDTVCAGNDMNKKCVTPVDLRKKCGQNSFAVCKEGLVCEEGFCKI
PNRGNCDVENPLCVDDTVCAGNDMNRKCVTPVDLRKKCGQNPFAVCKEGL
VCEEGFCKIPNRGNCDVDNPLCVDDTVCAGNDMNKKCVTPVDLRKKCGQN
PFAVCKESLVCEEGFCKIPNRGNCAVENPLCVDDTVCAGNDMNKKCVTPV
DLRKKCGQNPFAVCKEGLVCEEGFCKIPNRGNCDVDNPLCVDDTVCAGND
MNKKCVTPVDLRKKCGQNPFAVCKESLVCEEGFCKIPMGGDCAVNNFLCV
DDAICIGTDNIKRCVRPKDVRMPCGQNPFSVCKSDLVCEEGFCKVPKDGD
CNSKNSLCVDNTACVGSIRKRKCKMLKGMGQPCGNDPYSGEGSVADLVNC
RCVNADSSANKEFAKFELGAIANRFDLSAFRDMFVLGITTIDDVLSKEGV
VHDVDITRGKPGSLDLASIAEAPTACVGKDLFVHGSTDEKSASGKSESKS
LGLEHGSNAIIYALRDIYGLSVR*
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