Ggra8231.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra8231.t1
Unique Name	Ggra8231.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	248

Homology

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BLAST of Ggra8231.t1 vs. uniprot
Match: A0A2V3J5Q1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5Q1_9FLOR)

HSP 1 Score: 189 bits (480), Expect = 2.140e-56
Identity = 123/229 (53.71%), Postives = 148/229 (64.63%), Query Frame = 0

Query:   24 VSDKVSSIATKFGTIVDPTAPIPLRSPRKVSHISRQKSAPTVSTDDSQT--SVHNLASRFAQPEPKNETSNQFSSAAAAFREREKNTDA-DASKVVGMVRGIDDGVKRETQKVASVARVFESTAVSARYQGVAKPA--PQLTQNEPAAREAPIKXXXXKESVGVMTDDDELIARRSFGRASSVQDTARMFERGVSADTNGPKSSAHDHPVSAQEAKDRFQDAAKKFGAS 247
            VS+KVSSIATKFG IVDPTAPIPLRSPRK+S I  +K  P   + D Q   SV +LASRFA  E  N++S  FS AAAAFR RE+     + S+VVGM R +DDG K+E Q+VA+VAR FES+AV+ R      P     + Q     REAP+K      +  V   DDE +  R+FGRA SVQDTARMFERGVS DT   ++   +    A EAK RFQDAAK+F AS
Sbjct:   25 VSEKVSSIATKFGAIVDPTAPIPLRSPRKISRIQSEKYTPVKPSVDEQQHQSVQSLASRFA--ETSNKSSAPFSDAAAAFRAREEAMKRPEESRVVGMARSLDDGAKKEVQRVANVARAFESSAVAQRLDAPVSPPLFANIHQKSEPVREAPVKEAT---TAPVREGDDEQMRTRAFGRAKSVQDTARMFERGVSNDTKPVENGVQE----AGEAKLRFQDAAKRFEAS 244

The following BLAST results are available for this feature:

BLAST of Ggra8231.t1 vs. uniprot

BLAST of Ggra8231.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J5Q1	2.140e-56	53.71	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..247
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 227..241
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..106

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000872_pilon	contig	tig00000872_pilon:198309..199052 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra8231.t1	Ggra8231.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000872_pilon 198309..199052 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra8231.t1 ID=Ggra8231.t1|Name=Ggra8231.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=248bp
MSFKKVASYTANYEANQSAQQSPVSDKVSSIATKFGTIVDPTAPIPLRSP
RKVSHISRQKSAPTVSTDDSQTSVHNLASRFAQPEPKNETSNQFSSAAAA
FREREKNTDADASKVVGMVRGIDDGVKRETQKVASVARVFESTAVSARYQ
GVAKPAPQLTQNEPAAREAPIKEAPVKESVGVMTDDDELIARRSFGRASS
VQDTARMFERGVSADTNGPKSSAHDHPVSAQEAKDRFQDAAKKFGAS*