Ggra8224.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra8224.t1
Unique Name	Ggra8224.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	473

Homology

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BLAST of Ggra8224.t1 vs. uniprot
Match: R7Q4T8 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4T8_CHOCR)

HSP 1 Score: 74.7 bits (182), Expect = 1.820e-10
Identity = 88/334 (26.35%), Postives = 138/334 (41.32%), Query Frame = 0

Query:   24 TIASSSSRVHSLLLRIESSSATALTVALSLSEQLRHVLSLLRVAPQPQTPHPACNHTAPPALSQPLDALALVNHVHSQPTS---VTVPPNSAAVYEVQLTTQNACKQNIADLYPDVQPHNIATNAIPFSGHLVAVNLKTSLQVASLTLSGSCCESWLQPQLCVLHFAHCMVANWTYGDLAVRNKSQLPTVFSISVGLPSMPDHSSDVQFRFVDPVTASDLDPHAIRLDARSTTVVRVGFLASKEGSEEYWLSVQNLENADNFWHVRVLASPKGQLVAHGIHISCADALDFEDCYAYCPTFKQIDVRNDYSEAVNLSLLSDCRDEISYEISHDWS 354
            TI ++S    S  + +++ S++ L+V L+LS  LR +LSL            A  +TA P    P  A A +N +H   TS   +T+PP+S+  + +      A              H   T     SG L+         ++SL LS +   S L      L F H      +   L VRN S +PT F +S         +S +   F+     + L   AIR+   ++  V         GS    ++V+++ N      V V A      VA      C   L F DCY+ C  +K I V +  S  ++LS  S+ R ++++E+   WS
Sbjct:   26 TIIATSVSPVSATVTLQNHSSSPLSVTLTLSANLRPLLSL------------ATYYTATPPQPSPA-ASANLNLLHRSTTSSLPLTLPPHSSTPHPIHFVPSLAAPA-----------HASLTTLSSISGRLLLHLPPRRSPLSSLKLSATLSLSRLLVSPPSLPFGHIPALVESTQALNVRNVSPVPTSFLLS---------ASSLDLTFLHARKRTRLPRAAIRVPPFASRRVLCAVRPHAPGSLNATVAVEDVHNPHAMLRVPVTAVVAPP-VAGAFETDCGPELHFGDCYSSCSVYKDIAVTSKTSHRISLSFASNRRQQVTFELLPQWS 325

The following BLAST results are available for this feature:

BLAST of Ggra8224.t1 vs. uniprot

BLAST of Ggra8224.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
R7Q4T8	1.820e-10	26.35	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 356..386
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 356..377
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 412..472
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 412..432
None	No IPR available	PANTHER	PTHR39211	CHROMOSOME 7, WHOLE GENOME SHOTGUN SEQUENCE	coord: 155..467

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000872_pilon	contig	tig00000872_pilon:181565..183252 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra8224.t1	Ggra8224.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000872_pilon 181565..183252 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra8224.t1 ID=Ggra8224.t1|Name=Ggra8224.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=473bp
MDREGDGVVRLSAASGADAVHMGTIASSSSRVHSLLLRIESSSATALTVA
LSLSEQLRHVLSLLRVAPQPQTPHPACNHTAPPALSQPLDALALVNHVHS
QPTSVTVPPNSAAVYEVQLTTQNACKQNIADLYPDVQPHNIATNAIPFSG
HLVAVNLKTSLQVASLTLSGSCCESWLQPQLCVLHFAHCMVANWTYGDLA
VRNKSQLPTVFSISVGLPSMPDHSSDVQFRFVDPVTASDLDPHAIRLDAR
STTVVRVGFLASKEGSEEYWLSVQNLENADNFWHVRVLASPKGQLVAHGI
HISCADALDFEDCYAYCPTFKQIDVRNDYSEAVNLSLLSDCRDEISYEIS
HDWSKQRAEHQPMSSHDGLVHHDDENDTELDIAEDQQLPPDVVELLNGDT
SSKERVNAIDETQRWLSPTKGVPNQISSPGQESESVDDEEQLADENQPQF
DENMSLRPGQSRRLRVCSVDPL*