Ggra822.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra822.t1
Unique NameGgra822.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length139
Homology
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BLAST of Ggra822.t1 vs. uniprot
Match: A0A2V3IRS2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRS2_9FLOR)

HSP 1 Score: 196 bits (499), Expect = 1.920e-62
Identity = 98/137 (71.53%), Postives = 109/137 (79.56%), Query Frame = 0 
Query:    1 MFGYFSIPAFVVSCLVNFIITTVWYSTPVFGAVSKRLAFGKRRRKKLTRQGILASIAGSIFSFSFFSFVLHIVKCRGAFDGALWGLAFGFFFDSGMNVSHNFFERRSFALFLVHRGCHAVSLTLAGIVLGLLCGSPD 137
            MFGY S+PAF+VS LV FI+TTVWYS PVFG  +KRLAFGKRRR K + Q +  S+ GSI SFSFFS VLH+ KC+   DGALWGLA G FFDSGMN SH FFE RSF+LFL+H GCHAVSLT AGIVL LLCGSP 
Sbjct:    4 MFGYVSVPAFIVSSLVKFIVTTVWYSKPVFGTWAKRLAFGKRRRPKPSLQHLAVSVIGSIVSFSFFSTVLHVAKCQTPLDGALWGLALGLFFDSGMNASHCFFENRSFSLFLLHNGCHAVSLTTAGIVLALLCGSPS 140
[Close]
BLAST of Ggra822.t1 vs. uniprot
Match: A0A2V3IRU2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRU2_9FLOR)

HSP 1 Score: 124 bits (311), Expect = 6.880e-34
Identity = 62/133 (46.62%), Postives = 86/133 (64.66%), Query Frame = 0 
Query:    1 MFGYFSIPAFVVSCLVNFIITTVWYSTPVFGAVSKRLAFGKRRRKKLTRQGILASIAGSIFSFSFFSFVLHIVKCRGAFDGALWGLAFGFFFDSGMNVSHNFFERRSFALFLVHRGCHAVSLTLAGIVLGLLC 133
            ++ + S  AF++  L++  +  +WYS PVFG+   RLA   +   K   + + A+  G+  +  FFSF+L +  CR A +GALWGLAFG FFDSG+N SH FFE R FALF++HRG H+VSL + G  LG LC
Sbjct:    4 VYDFVSFQAFIIGWLLHMTMGMIWYSMPVFGSAFVRLALKGKMPTKPDPRAMFAACVGTATAIPFFSFLLRVANCRSAGEGALWGLAFGVFFDSGLNASHCFFENRPFALFVLHRGYHSVSLAVIGAALGRLC 136
The following BLAST results are available for this feature:
BLAST of Ggra822.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IRS21.920e-6271.53Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IRU26.880e-3446.62Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013879Protein of unknown function DUF1761PFAMPF08570DUF1761coord: 9..130
e-value: 3.1E-14
score: 53.3
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 108..132
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 51..72
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 78..96
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 97..107
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 73..77
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 31..50
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 133..138
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..30
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
NoneNo IPR availableTMHMMTMhelixcoord: 51..73
NoneNo IPR availableTMHMMTMhelixcoord: 83..103
NoneNo IPR availableTMHMMTMhelixcoord: 110..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000906_piloncontigtig00000906_pilon:216882..217387 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra822.t1Ggra822.t1Gracilaria gracilis GNS1m malemRNAtig00000906_pilon 216882..217387 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra822.t1 ID=Ggra822.t1|Name=Ggra822.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=139bp
MFGYFSIPAFVVSCLVNFIITTVWYSTPVFGAVSKRLAFGKRRRKKLTRQ
GILASIAGSIFSFSFFSFVLHIVKCRGAFDGALWGLAFGFFFDSGMNVSH
NFFERRSFALFLVHRGCHAVSLTLAGIVLGLLCGSPDM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013879DUF1761