Ggra8199.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8199.t1
Unique NameGgra8199.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length178
Homology
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BLAST of Ggra8199.t1 vs. uniprot
Match: A0A2V3J5X9 (Major facilitator superfamily domain-containing protein 6 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5X9_9FLOR)

HSP 1 Score: 167 bits (422), Expect = 8.850e-47
Identity = 85/147 (57.82%), Postives = 107/147 (72.79%), Query Frame = 0 
Query:   11 MAVLAAPGRFSSVFLQAHGLRQSQVGILLAIHPICALIATPFFCSFADIHDLKESTSMFLSGLAMFFFCAQIIALPELGILQGSQTFLFFIAVRVLFGVFAAPTMPLTNGIVLSNLKLRHGHKGHELLGHERLFGAASWALVSLGIG 157
            +AV AAPGRF+ VFL++HGL +SQ+GILLA+   C+L++TP  CSFAD H  +EST++    L+  FF  QIIALP LG++QG   F FF+ VR+L  +F  P   L   IVLS LKL HGHKGHELLG ERL+GA SWA+VSL +G
Sbjct:    3 LAVQAAPGRFTPVFLRSHGLSESQIGILLALPTACSLLSTPLVCSFADRHKARESTALATQTLSTIFFLLQIIALPGLGLIQGGSVFAFFLLVRILQVMFFNPAYSLLISIVLSRLKLLHGHKGHELLGQERLWGAVSWAVVSLVLG 149
The following BLAST results are available for this feature:
BLAST of Ggra8199.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J5X98.850e-4757.82Major facilitator superfamily domain-containing pr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024989Major facilitator superfamily associated domainPFAMPF12832MFS_1_likecoord: 2..161
e-value: 3.6E-18
score: 65.6
IPR036259MFS transporter superfamilyGENE3D1.20.1250.20MFS general substrate transporter like domainscoord: 1..162
e-value: 3.9E-11
score: 44.7
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 3..126
NoneNo IPR availablePANTHERPTHR16172UNCHARACTERIZEDcoord: 3..74
coord: 94..158
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 69..91
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 143..159
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 92..96
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 160..177
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..36
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 123..142
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..57
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 58..68
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 97..122
NoneNo IPR availableTMHMMTMhelixcoord: 3..25
NoneNo IPR availableTMHMMTMhelixcoord: 35..57
NoneNo IPR availableTMHMMTMhelixcoord: 69..91
NoneNo IPR availableTMHMMTMhelixcoord: 101..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000872_piloncontigtig00000872_pilon:120760..121402 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8199.t1Ggra8199.t1Gracilaria gracilis GNS1m malemRNAtig00000872_pilon 120760..121402 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8199.t1 ID=Ggra8199.t1|Name=Ggra8199.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=178bp
MRLGWLYFALMAVLAAPGRFSSVFLQAHGLRQSQVGILLAIHPICALIAT
PFFCSFADIHDLKESTSMFLSGLAMFFFCAQIIALPELGILQGSQTFLFF
IAVRVLFGVFAAPTMPLTNGIVLSNLKLRHGHKGHELLGHERLFGAASWA
LVSLGIGWHENALRHLVSKQVTPTRAP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024989MFS_assoc_dom
IPR036259MFS_trans_sf