Ggra8198.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8198.t1
Unique NameGgra8198.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length393
Homology
BLAST of Ggra8198.t1 vs. uniprot
Match: A0A2V3JBD7 (Kinetochore protein mis18 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3JBD7_9FLOR)

HSP 1 Score: 270 bits (689), Expect = 5.060e-84
Identity = 122/226 (53.98%), Postives = 172/226 (76.11%), Query Frame = 0
Query:   78 YSDIIFQCAKCHTVVGDTRSPHVVDLEHNILSLKAASNIRSEDKLHVCQKGFAAGCTFRRVLCDNCGAPVGRIYASTIAALDQYRSLYTLDYDSLDTYRLGSGKTPDGEAVEGPSTPNSKSQRGGVEPRVSAEDFIALDSYVTDVGKAVNKQTDAMDQYGKALEELQKDFKDSDNLMKDVRQSLEYAQNIILVWEERFRNLDSFKERTNTLLEGVQGHMENCQNVE 303
            + DI+FQC +C+ VVGDT+S H+ D+++ ILSLK ASN++ ED++HVCQ GFAAGCTF+R++C NC +P+GR+YAST+A+LD YRSL+T + +SL TY+LGSGKT +G+ +    +     Q  G E  V+ EDF+ LD YV ++GKAVN  TDA   YG ALEE++++F+D+++L KD+RQSLEY QNIILVWEERFR+ D+F++ T   +EG Q   +  Q++E
Sbjct:   72 FDDIVFQCGECNVVVGDTKSRHLTDVKNGILSLKIASNVKVEDRVHVCQSGFAAGCTFKRIMCLNCKSPLGRVYASTVASLDVYRSLFTFNCESLQTYKLGSGKTLEGKCIPDEESNQPAPQNNGSEATVTVEDFVTLDKYVANLGKAVNNLTDAFGHYGGALEEMRREFRDNNDLTKDIRQSLEYVQNIILVWEERFRSFDAFRQNTTKSIEGCQRQNDRVQHLE 297          
BLAST of Ggra8198.t1 vs. uniprot
Match: A0A8B8AQ38 (uncharacterized protein LOC111103880 isoform X1 n=3 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8AQ38_CRAVI)

HSP 1 Score: 75.5 bits (184), Expect = 2.350e-11
Identity = 44/127 (34.65%), Postives = 67/127 (52.76%), Query Frame = 0
Query:   54 RQAEDGNDSITPQEDVQKKAADENYSDIIFQCAKCHTVVGDTRSPHVVDLEHNILSLKAASNIRSEDK-LHVCQKGFAAGCTFRRVLCDNCGAPVGRIYASTIAALDQYRSLYTLDYDSLDTYRLGS 179
            +Q E  N   T   D     ADE    ++FQCA+C+ ++GD+ +   VD     ++LK  SN   ED+ + +   GF AG T+ ++ C  C   +GR Y   +  LD  R +YTL  D L +Y++GS
Sbjct:    5 QQEESINQQSTCSPDSSSFNADE--PPLVFQCAQCNVIIGDSTAWACVDDISRTITLKNVSNAVVEDEEMKIANTGFDAGSTYYKMSCATCREDIGRRYKGAVNHLDSARGMYTLFVDKLSSYQIGS 129          
BLAST of Ggra8198.t1 vs. uniprot
Match: A0A4D9CX68 (Mis18 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CX68_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 5.450e-10
Identity = 35/119 (29.41%), Postives = 61/119 (51.26%), Query Frame = 0
Query:   61 DSITPQEDVQKKAADENYSDIIFQCAKCHTVVGDTRSPHVVDLEHNILSLKAASNIRSEDKLHVCQKGFAAGCTFRRVLCDNCGAPVGRIYASTIAALDQYRSLYTLDYDSLDTYRLGS 179
            DS+ P  D          + ++FQCA+C  +VGD+      D +   ++L+ A  I         ++G   G TF  + C+ C   +G++Y +T   LD  R+L+TL  D+L+++ LG+
Sbjct:    7 DSLPPAPDASSANDATVTAYVVFQCAECRRIVGDSLGLSSADEDLRHITLRGACGIVRGPCTRTSEEGNDRGSTFHELFCEGCSTLLGKVYLTTPPRLDGARNLFTLSTDALESFELGT 125          
BLAST of Ggra8198.t1 vs. uniprot
Match: F2U1H3 (Mis18 domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U1H3_SALR5)

HSP 1 Score: 67.8 bits (164), Expect = 1.910e-9
Identity = 38/100 (38.00%), Postives = 57/100 (57.00%), Query Frame = 0
Query:   81 IIFQCAKCHTVVGDTRSPHVVDLEHNILSLK-AASNIRSEDKLHVCQKGFAAGCTFRRVLCDNCGAPVGRIYASTIAALDQYRSLYTLDYDSLDTYRLGS 179
            ++FQCA C  VVGD+ +    D + N ++L  AA  ++   +L    +G   G T+    C +CGA +GR+Y +T   LD  R L T D D+L +Y+LGS
Sbjct:   53 LVFQCAACRAVVGDSFAWVCSDQDLNTITLTGAAPGVKINGQLETSTQGRDLGSTYVTFQC-SCGAILGRVYQTTARHLDHMRDLMTFDLDALTSYKLGS 151          
BLAST of Ggra8198.t1 vs. uniprot
Match: A0A830H7G4 (Mis18 domain-containing protein n=2 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830H7G4_9CHLO)

HSP 1 Score: 67.8 bits (164), Expect = 2.420e-9
Identity = 46/168 (27.38%), Postives = 80/168 (47.62%), Query Frame = 0
Query:   81 IIFQCAKCHTVVGDTRSPHVVDLEHNILSLKAASNIR-SEDKLHVCQKGFAAGCTFRRVLCDNCGAPVGRIYASTIAALDQYRSLYTLDYDSLDTYRLGSGKTPDGEAVEG---PSTPNSKSQRGGVEPRVSAEDFIALDSYVTDVGKAVNKQTDAMDQYGKALEELQ 244
            +++QCA C  V GDT      + E   ++LKAASNI   E +     +G  A  T+  + C +C + VG+ Y +T  +LD  R  ++  +D+L TY LG  +    +  +G    +   + +  GG       E   +++  V ++ K   K  + +  Y + LE L+
Sbjct:   20 LVWQCANCRVVFGDTYGFVCANEELRTITLKAASNIVVDEAEPRTSAEGIDASSTYFAIRCKSCDSMVGKFYRATPRSLDVLRDSFSFSHDALITYTLGHNELTVEDEEDGGGDAAAAGTANGDGGATLENVVEAIKSVEGQVAELDKQHMKTMNILLLYSERLENLE 187          
BLAST of Ggra8198.t1 vs. uniprot
Match: A0A0E9NJN7 (Mis18 domain-containing protein n=2 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9NJN7_SAICN)

HSP 1 Score: 69.3 bits (168), Expect = 3.540e-9
Identity = 31/101 (30.69%), Postives = 57/101 (56.44%), Query Frame = 0
Query:   81 IIFQCAKCHTVVGDTRSPHVVDLEHNILSLKAASNIRSEDKLHVCQKGFAA--GCTFRRVLCDNCGAPVGRIYASTIAALDQYRSLYTLDYDSLDTYRLGS 179
            +IFQCA C T++GD+ +     ++ N  +L +A NI   + + +     +A  GCT+  + C  C A +G++Y +T+  LD+ R +YT+   +   Y +G+
Sbjct:  156 VIFQCASCRTIIGDSYAHITSHIDLNTFTLSSAPNITIREPILLSTDDESADKGCTYSELACAGCEATLGKMYRTTLRTLDEIRDMYTISLPAATLYEVGT 256          
BLAST of Ggra8198.t1 vs. uniprot
Match: protein Mis18-alpha n=1 Tax=Protobothrops mucrosquamatus TaxID=103944 RepID=UPI0007759FB2 (protein Mis18-alpha n=1 Tax=Protobothrops mucrosquamatus TaxID=103944 RepID=UPI0007759FB2)

HSP 1 Score: 65.5 bits (158), Expect = 6.740e-9
Identity = 33/102 (32.35%), Postives = 53/102 (51.96%), Query Frame = 0
Query:   81 IIFQCAKCHTVVGDTRSPHVVDLEHNILSLKAAS-NIRSEDKLHVCQKGFAAGCTFRRVLCDNCGAPVGRIYASTIAALDQYRSLYTLDYDSLDTYRLGSGK 181
            ++F CA+C+ +VGDT S    D + N + L + + N+  + +  +  +    GC    + C  C   +G IY  T   LD  R L+ L  DSL++Y LGS +
Sbjct:   35 MVFLCARCNRIVGDTLSWETNDEDTNCILLNSVTRNVSVDKEQRLSSQAGETGCILETLFCSGCSMNLGNIYRCTPRHLDYKRDLFCLKVDSLESYTLGSSE 136          
BLAST of Ggra8198.t1 vs. uniprot
Match: A0A2G5BBS6 (Protein yippee-like (Fragment) n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BBS6_COERN)

HSP 1 Score: 61.6 bits (148), Expect = 2.270e-8
Identity = 33/100 (33.00%), Postives = 52/100 (52.00%), Query Frame = 0
Query:   81 IIFQCAKCHTVVGDTRSPHVVDLEHNILSLKAASN--IRSEDKLHVCQKGFAAGCTFRRVLCDNCGAPVGRIYASTIAALDQYRSLYTLDYDSLDTYRLG 178
            ++F CAKC T++GDT +      E N+ +L    N  +  + +    ++G   GC F  + C  C + +GR Y +TI  +D  R+ Y LD   + TY LG
Sbjct:    1 VVFSCAKCRTIIGDTFAYVASIPERNLFALSEVPNSVVCGKTRKISSERG-EDGCVFYDLTCAECDSLIGRRYVTTIEDMDVIRNSYALDIQRVMTYELG 99          
BLAST of Ggra8198.t1 vs. uniprot
Match: protein Mis18-alpha-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719C120 (protein Mis18-alpha-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719C120)

HSP 1 Score: 61.6 bits (148), Expect = 1.120e-7
Identity = 30/100 (30.00%), Postives = 52/100 (52.00%), Query Frame = 0
Query:   81 IIFQCAKCHTVVGDTRSPHVVDLEHNILSLKAAS-NIRSEDKLHVCQKGFAAGCTFRRVLCDNCGAPVGRIYASTIAALDQYRSLYTLDYDSLDTYRLGS 179
            I+FQCAKC+ ++GD+ S    +   + + L A + N+     +    +    G T+  + C+NC   +GR+Y +T   LD+ R L+      + +Y LGS
Sbjct:   13 IVFQCAKCNVIIGDSTSWAFANKSLSGVVLHATTQNVTETQMVRTSDEDVDFGSTYTLLQCNNCKTTIGRVYKTTPKKLDEVRDLFMFSVPMISSYHLGS 112          
BLAST of Ggra8198.t1 vs. uniprot
Match: protein Mis18-beta n=1 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A2CEA5 (protein Mis18-beta n=1 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A2CEA5)

HSP 1 Score: 61.2 bits (147), Expect = 1.620e-7
Identity = 36/100 (36.00%), Postives = 52/100 (52.00%), Query Frame = 0
Query:   81 IIFQCAKCHTVVGDTRSPHVVDLEHNIL-SLKAASNIRSEDKLHVCQKGFAAGCTFRRVLCDNCGAPVGRIYASTIAALDQYRSLYTLDYDSLDTYRLGS 179
            +IFQC +CHTV+GD+       L  N+L  L+   N+  +    +  +G  + C ++ + C  C A VG +  ST  ALD  R LY LD  +L  Y L S
Sbjct:   15 VIFQCKRCHTVLGDSLQSCGSSLPLNMLICLRVTENVDMDPVSFIGCEGPMSKCLYKSLYCSLCRAHVGIVPFSTTDALDHLRGLYCLDKCALHCYMLQS 114          
The following BLAST results are available for this feature:
BLAST of Ggra8198.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A2V3JBD75.060e-8453.98Kinetochore protein mis18 n=1 Tax=Gracilariopsis c... [more]
A0A8B8AQ382.350e-1134.65uncharacterized protein LOC111103880 isoform X1 n=... [more]
A0A4D9CX685.450e-1029.41Mis18 domain-containing protein n=2 Tax=Monodopsid... [more]
F2U1H31.910e-938.00Mis18 domain-containing protein n=1 Tax=Salpingoec... [more]
A0A830H7G42.420e-927.38Mis18 domain-containing protein n=2 Tax=Pycnococcu... [more]
A0A0E9NJN73.540e-930.69Mis18 domain-containing protein n=2 Tax=Saitoella ... [more]
protein Mis18-alpha n=1 Tax=Protobothrops mucrosquamatus TaxID=103944 RepID=UPI0007759FB26.740e-932.35protein Mis18-alpha n=1 Tax=Protobothrops mucrosqu... [more]
A0A2G5BBS62.270e-833.00Protein yippee-like (Fragment) n=1 Tax=Coemansia r... [more]
protein Mis18-alpha-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719C1201.120e-730.00protein Mis18-alpha-like n=1 Tax=Priapulus caudatu... [more]
protein Mis18-beta n=1 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A2CEA51.620e-736.00protein Mis18-beta n=1 Tax=Rhincodon typus TaxID=2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 226..260
NoneNo IPR availableCOILSCoilCoilcoord: 299..343
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 375..392
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 11..54
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 371..392
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 180..203
NoneNo IPR availablePANTHERPTHR16431NEUROGENIC PROTEIN MASTERMINDcoord: 15..259
IPR004910Yippee/Mis18/CereblonPFAMPF03226Yippee-Mis18coord: 82..181
e-value: 9.0E-17
score: 61.2
IPR034752Mis18 domainPROSITEPS51793MIS18coord: 80..177
score: 34.274303

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000872_piloncontigtig00000872_pilon:116126..117304 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8198.t1Ggra8198.t1Gracilaria gracilis GNS1m malemRNAtig00000872_pilon 116126..117304 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8198.t1 ID=Ggra8198.t1|Name=Ggra8198.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=393bp
MGKRGHSRRANVRTAAKDKQADDGEHHTQNPPSEDPQSEHAPSEMHEPAS
EASRQAEDGNDSITPQEDVQKKAADENYSDIIFQCAKCHTVVGDTRSPHV
VDLEHNILSLKAASNIRSEDKLHVCQKGFAAGCTFRRVLCDNCGAPVGRI
YASTIAALDQYRSLYTLDYDSLDTYRLGSGKTPDGEAVEGPSTPNSKSQR
GGVEPRVSAEDFIALDSYVTDVGKAVNKQTDAMDQYGKALEELQKDFKDS
DNLMKDVRQSLEYAQNIILVWEERFRNLDSFKERTNTLLEGVQGHMENCQ
NVERKFTKLDANVDRLKNTVVRFERMERTIANLRAKVDGLNTTDTRFDDN
DPIRGDKIKGTFAPVQYNLPRNTRHRHQISGRSSPKAKRRRI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004910Yippee/Mis18/Cereblon
IPR034752Mis18