Ggra8196.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8196.t1
Unique NameGgra8196.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length133
Homology
BLAST of Ggra8196.t1 vs. uniprot
Match: A0A2V3J5W3 (Glutaredoxin n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5W3_9FLOR)

HSP 1 Score: 210 bits (534), Expect = 5.230e-68
Identity = 98/132 (74.24%), Postives = 115/132 (87.12%), Query Frame = 0
Query:    1 MNLTFVSPLGRLPFNALRTARQNSRCSVRPRWYASTGSLVDKAISESNVMVFSASYCPYCARVKSLFGDLNVDHTVWELDERDDGDDIKGVLLEKTGQRTVPNVFVQGQHVGGCDDTMALHQDGKLLSMINA 132
            M L+FVS LGRLP + L   R ++RC+VRPRW+AS+ S+VD AI+E+NVMVFSASYCPYC +VKSLF +L+VDHTVWELDER DGDDIKGVLLEKTGQRTVPNVF+ G+HVGGCDDTMAL+  GKLL M+NA
Sbjct:    1 MALSFVSTLGRLPLSPLGLGRSSARCAVRPRWFASSASIVDNAITENNVMVFSASYCPYCRQVKSLFNELDVDHTVWELDERADGDDIKGVLLEKTGQRTVPNVFIGGKHVGGCDDTMALYDGGKLLGMVNA 132          
BLAST of Ggra8196.t1 vs. uniprot
Match: R7QBL2 (Glutaredoxin, GRX4 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBL2_CHOCR)

HSP 1 Score: 131 bits (329), Expect = 1.510e-36
Identity = 72/147 (48.98%), Postives = 92/147 (62.59%), Query Frame = 0
Query:    1 MNLTFVSPLGRL-----PFNALRTARQNSRCSVRP------RWYASTGSLVDK----AISESNVMVFSASYCPYCARVKSLFGDLNVDHTVWELDERDDGDDIKGVLLEKTGQRTVPNVFVQGQHVGGCDDTMALHQDGKLLSMINA 132
            M L F S L R      P  AL   R  ++ S +P      RW  +T S   +    AI+ S +MVFS SYCPYC RV++LF +L  +HTVWE+D R DG +I+  L E+TGQ TVPNVF+ G+HVGGCDDT+ L Q GKL+ MI+A
Sbjct:    1 MPLAFASALARAFPLTTPGGALVCRRTVAKPSTQPARRPPSRWVCATASSAAETARNAIASSPIMVFSGSYCPYCTRVRALFEELGAEHTVWEVDLRTDGGEIRRFLAEETGQTTVPNVFIGGKHVGGCDDTIELLQQGKLMDMIDA 147          
BLAST of Ggra8196.t1 vs. uniprot
Match: A0A0L0HVH8 (Glutaredoxin n=1 Tax=Spizellomyces punctatus (strain DAOM BR117) TaxID=645134 RepID=A0A0L0HVH8_SPIPD)

HSP 1 Score: 119 bits (299), Expect = 2.020e-32
Identity = 54/102 (52.94%), Postives = 73/102 (71.57%), Query Frame = 0
Query:   30 PRWYASTGSLVDKAISESNVMVFSASYCPYCARVKSLFGDLNVDHTVWELDERDDGDDIKGVLLEKTGQRTVPNVFVQGQHVGGCDDTMALHQDGKLLSMIN 131
            P   +++  LV+KAI E+ V+VFS SYCPYC + K+L   L V + ++ELDER DG  I+  L EKTGQRTVPN+F++GQH+GGCDD  A H  GKL  +++
Sbjct:   17 PEEMSASKELVEKAIKENKVVVFSKSYCPYCKKAKNLLDSLGVKYELFELDERPDGQAIQEYLKEKTGQRTVPNIFIKGQHIGGCDDLHAAHDSGKLQKLLD 118          
BLAST of Ggra8196.t1 vs. uniprot
Match: A0A5D6XXM7 (Glutaredoxin domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXM7_9STRA)

HSP 1 Score: 115 bits (289), Expect = 4.970e-31
Identity = 53/91 (58.24%), Postives = 68/91 (74.73%), Query Frame = 0
Query:   40 VDKAISESNVMVFSASYCPYCARVKSLFGDLNVDHTVWELDERDDGDDIKGVLLEKTGQRTVPNVFVQGQHVGGCDDTMALHQDGKLLSMI 130
            V   I +  V+VFS ++CP+CARVK+LF DL  D  + ELDE  DG +I+ +LLE T QRTVPNVF++GQH+GGCD TMALH D KLL ++
Sbjct:   18 VQALIQKEPVLVFSKTHCPHCARVKALFKDLKTDFELVELDEHADGSEIQDLLLELTNQRTVPNVFIKGQHIGGCDSTMALHADNKLLPLL 108          
BLAST of Ggra8196.t1 vs. uniprot
Match: A0A4Y7LG73 (Glutaredoxin domain-containing protein n=2 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7LG73_PAPSO)

HSP 1 Score: 118 bits (296), Expect = 1.480e-30
Identity = 58/115 (50.43%), Postives = 77/115 (66.96%), Query Frame = 0
Query:   24 SRCSVRPRWYASTGS-------LVDKAISESNVMVFSASYCPYCARVKSLFGDLNVDHTVWELDERDDGDDIKGVLLEKTGQRTVPNVFVQGQHVGGCDDTMALHQDGKLLSMIN 131
            S CS     YA++GS        +DK IS  N+++FS SYCPYC R K++F +LN    V ELDERDDG DI+G L EK G+RTVP VFV G+H+GG DDT+  ++ G+L  ++N
Sbjct:  118 SLCSSTTTVYATSGSGSSSEAAFIDKTISSHNIVIFSKSYCPYCKRAKAVFKELNQTPHVIELDERDDGYDIQGALGEKLGRRTVPQVFVNGKHIGGSDDTLDAYESGELAKLLN 232          
BLAST of Ggra8196.t1 vs. uniprot
Match: M2RCK3 (Glutaredoxin domain-containing protein n=1 Tax=Ceriporiopsis subvermispora (strain B) TaxID=914234 RepID=M2RCK3_CERS8)

HSP 1 Score: 115 bits (287), Expect = 3.010e-30
Identity = 57/120 (47.50%), Postives = 79/120 (65.83%), Query Frame = 0
Query:   15 NALRTARQNSRCSVRPRWYASTGSLVDKAISESNVMVFSASYCPYCARVKSLFGDL--NVDHTVWELDERDDGDDIKGVLLEKTGQRTVPNVFVQGQHVGGCDDTMALHQDGKLLSMINA 132
            +++  A  +SR S+  +   +   LVD A+S++ ++VFS SYCPYC R K+L      +V   V+ELDER+DG DI+  LLEKTGQRTVPN+F+  QHVGG D   AL  +GKL  ++ A
Sbjct:   28 SSITAAASSSRPSLYQQRIMAAKDLVDSAVSQNKIVVFSKSYCPYCKRAKALLSSKFPSVPTAVYELDEREDGSDIQSYLLEKTGQRTVPNIFISQQHVGGSDALAALDSEGKLADLVGA 147          
BLAST of Ggra8196.t1 vs. uniprot
Match: A0A7S3NI43 (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NI43_9STRA)

HSP 1 Score: 114 bits (284), Expect = 5.900e-30
Identity = 49/91 (53.85%), Postives = 68/91 (74.73%), Query Frame = 0
Query:   40 VDKAISESNVMVFSASYCPYCARVKSLFGDLNVDHTVWELDERDDGDDIKGVLLEKTGQRTVPNVFVQGQHVGGCDDTMALHQDGKLLSMI 130
            +D  I  ++V++FS SYCP+CA+ K+LF  LNVD  ++ELD+RDDG +I+  L EKTGQ TVPNVF++G+H+GG DDT   H  GKL  ++
Sbjct:   43 IDDTIKANDVVIFSKSYCPFCAKTKALFQSLNVDADIYELDQRDDGAEIQSKLKEKTGQSTVPNVFIKGEHLGGNDDTQRAHASGKLAELL 133          
BLAST of Ggra8196.t1 vs. uniprot
Match: A0A409WGD6 (Glutaredoxin domain-containing protein n=1 Tax=Psilocybe cyanescens TaxID=93625 RepID=A0A409WGD6_PSICY)

HSP 1 Score: 114 bits (284), Expect = 6.820e-30
Identity = 62/121 (51.24%), Postives = 74/121 (61.16%), Query Frame = 0
Query:   12 LPFNALRTARQNSRCSVRPRWYASTGSLVDKAISESNVMVFSASYCPYCARVKSLFGDLNVDH--TVWELDERDDGDDIKGVLLEKTGQRTVPNVFVQGQHVGGCDDTMALHQDGKLLSMI 130
            L F    T   +S  S       S    V+ +IS + V +FS SYCPYC +VK+LF     D   TV ELDERDDG DI+  L +KTGQRTVPNVFV+ QH+GG DDT A HQ GKL  +I
Sbjct:   17 LSFALFSTTASSSNPSAAQLHRMSVKQFVEDSISNNKVTIFSKSYCPYCRKVKTLFSTNFPDEKPTVIELDERDDGSDIQEYLYQKTGQRTVPNVFVKQQHIGGNDDTTAFHQAGKLAPLI 137          
BLAST of Ggra8196.t1 vs. uniprot
Match: A0A2D4BV76 (Glutaredoxin n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BV76_PYTIN)

HSP 1 Score: 113 bits (282), Expect = 7.460e-30
Identity = 54/95 (56.84%), Postives = 68/95 (71.58%), Query Frame = 0
Query:   36 TGSLVDKAISESNVMVFSASYCPYCARVKSLFGDLNVDHTVWELDERDDGDDIKGVLLEKTGQRTVPNVFVQGQHVGGCDDTMALHQDGKLLSMI 130
            T S V  AI    V+VFS + CPYCARVK+LF DL+V+H V ELDER DG +I+ +LL  T QRTVPNVF++GQH+GGCD    L+   KL +M+
Sbjct:   23 TKSSVQAAIKSEKVLVFSKTXCPYCARVKALFEDLDVEHEVVELDERPDGSEIQEILLSLTKQRTVPNVFIKGQHIGGCDAVTELYAQKKLQAML 117          
BLAST of Ggra8196.t1 vs. uniprot
Match: K3WHD5 (Glutaredoxin domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WHD5_GLOUD)

HSP 1 Score: 112 bits (281), Expect = 1.330e-29
Identity = 52/91 (57.14%), Postives = 68/91 (74.73%), Query Frame = 0
Query:   40 VDKAISESNVMVFSASYCPYCARVKSLFGDLNVDHTVWELDERDDGDDIKGVLLEKTGQRTVPNVFVQGQHVGGCDDTMALHQDGKLLSMI 130
            V  AI+   V+VF+ +YCP+CARVK+L  DL  D  V ELDER DG +I+ +LLE T QRTVPNVF++GQH+GG D T+ALH D KL+ ++
Sbjct:   35 VQAAIANERVLVFAKTYCPHCARVKALLNDLKTDFEVVELDERADGAEIQAILLELTKQRTVPNVFIKGQHIGGADATVALHADKKLVPLL 125          
The following BLAST results are available for this feature:
BLAST of Ggra8196.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5W35.230e-6874.24Glutaredoxin n=1 Tax=Gracilariopsis chorda TaxID=4... [more]
R7QBL21.510e-3648.98Glutaredoxin, GRX4 n=1 Tax=Chondrus crispus TaxID=... [more]
A0A0L0HVH82.020e-3252.94Glutaredoxin n=1 Tax=Spizellomyces punctatus (stra... [more]
A0A5D6XXM74.970e-3158.24Glutaredoxin domain-containing protein (Fragment) ... [more]
A0A4Y7LG731.480e-3050.43Glutaredoxin domain-containing protein n=2 Tax=Pap... [more]
M2RCK33.010e-3047.50Glutaredoxin domain-containing protein n=1 Tax=Cer... [more]
A0A7S3NI435.900e-3053.85Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A409WGD66.820e-3051.24Glutaredoxin domain-containing protein n=1 Tax=Psi... [more]
A0A2D4BV767.460e-3056.84Glutaredoxin n=1 Tax=Pythium insidiosum TaxID=1147... [more]
K3WHD51.330e-2957.14Glutaredoxin domain-containing protein n=1 Tax=Glo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014025Glutaredoxin subgroupPRINTSPR00160GLUTAREDOXINcoord: 49..67
score: 44.3
coord: 94..107
score: 55.06
coord: 108..121
score: 44.64
IPR002109GlutaredoxinPFAMPF00462Glutaredoxincoord: 49..111
e-value: 8.9E-16
score: 57.9
IPR011899Glutaredoxin, eukaryotic/virialTIGRFAMTIGR02180TIGR02180coord: 49..129
e-value: 1.5E-29
score: 100.0
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 35..132
e-value: 2.8E-36
score: 125.6
NoneNo IPR availablePANTHERPTHR45694GLUTAREDOXIN 2coord: 39..130
NoneNo IPR availablePROSITEPS51354GLUTAREDOXIN_2coord: 37..132
score: 22.46195
NoneNo IPR availableCDDcd03419GRX_GRXh_1_2_likecoord: 49..129
e-value: 1.86349E-45
score: 140.753
IPR011767Glutaredoxin active sitePROSITEPS00195GLUTAREDOXIN_1coord: 51..66
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 39..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000872_piloncontigtig00000872_pilon:113707..114178 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8196.t1Ggra8196.t1Gracilaria gracilis GNS1m malemRNAtig00000872_pilon 113707..114178 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8196.t1 ID=Ggra8196.t1|Name=Ggra8196.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=133bp
MNLTFVSPLGRLPFNALRTARQNSRCSVRPRWYASTGSLVDKAISESNVM
VFSASYCPYCARVKSLFGDLNVDHTVWELDERDDGDDIKGVLLEKTGQRT
VPNVFVQGQHVGGCDDTMALHQDGKLLSMINA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014025Glutaredoxin_subgr
IPR002109Glutaredoxin
IPR011899Glutaredoxin_euk/vir
IPR011767GLR_AS
IPR036249Thioredoxin-like_sf