Ggra8194.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra8194.t1 vs. uniprot
Match: A0A2V3J775 (DNA-directed RNA polymerase III subunit RPC8 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J775_9FLOR) HSP 1 Score: 350 bits (899), Expect = 3.580e-119 Identity = 168/238 (70.59%), Postives = 192/238 (80.67%), Query Frame = 0
Query: 1 MFKLVTIEDVLLVPARLFGYPRLEALEYVINKRLSDKVIPGVGLVIAFWEWVKVGQDSLQIHSGECSTKCTFRVVVFAPFEGEVLFARVSGAYNHGLFMEMGFFDAVFVPSENLPRPSHYDESERVWIWKPVFEEGADPQTYYMDVTNESVFRAMELMFEDSWRVPPSEKKEDGRNPMSIVGALFDAVLQDNQGLGDPLWXXXXXXXXXXXXXXXXXXGLEEQVPVGEEGIVEGQEKE 238
MFKLVTIEDV+LVPARLFGYPRLE+LEYVINKRLSDK+IPGVGLVIAFW+WVKVG+D+LQIHSGE +TKCTFRVVVF+PFEGE +F RVSGAY+ G+FME+GFFDA+ V ENLPRPS YDE ERVWIWKP FEE + QT+YMDVTNESVFR MELMFEDSWR+PP+E+ +GRNPMSI AL+D +QDNQGLGDPLW G +E+ V E+G EG E E
Sbjct: 1 MFKLVTIEDVVLVPARLFGYPRLESLEYVINKRLSDKIIPGVGLVIAFWDWVKVGEDALQIHSGESNTKCTFRVVVFSPFEGEAVFGRVSGAYDGGVFMELGFFDAITVKKENLPRPSSYDEDERVWIWKPTFEEEGEAQTFYMDVTNESVFRVMELMFEDSWRIPPTERNVEGRNPMSIFAALYDEAVQDNQGLGDPLWWYEEGEGEDEGEEGGVGDGAKEEAEVLEDG--EGGEGE 236
BLAST of Ggra8194.t1 vs. uniprot
Match: M2XAH4 (DNA-directed RNA polymerase III subunit C25 isoform 1 n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XAH4_GALSU) HSP 1 Score: 127 bits (320), Expect = 1.100e-32 Identity = 61/164 (37.20%), Postives = 100/164 (60.98%), Query Frame = 0
Query: 1 MFKLVTIEDVLLVPARLFGYPRLEALEYVINKRLSDKVIPGVGLVIAFWEWVKVGQDSLQIHSGECSTKCTFRVVVFAPFEGEVLFARVSGAYNHGLFMEMGFFDAVFVPSENLPRPSHYDESERVWIWKPVFEEGADPQTYYMDVTNESVFRAMELMFEDSWR 164
MFKL +ED L + F P+ +AL Y ++++ S++++PGVGL + W+W+K +D L G TK FR++VF P GEV+ RV + + GL++ + FF+ +F+ L PS +DE E+VWIWK +G D ++DV + FR +++++E+S R
Sbjct: 1 MFKLAVLEDTLRISPERFSLPKFDALCYAVHRKYSNRIVPGVGLCVGLWDWLKAEEDYLHPGDGGSWTKVIFRLLVFEPQVGEVIIGRVEHSSSEGLYVSVDFFNNIFIDRLALQEPSVFDEEEQVWIWK---YQGHD---LHIDVGEDIRFRVVKVVYENSDR 158
BLAST of Ggra8194.t1 vs. uniprot
Match: A0A0C2CNL1 (RNA polymerase Rpb7 protein n=3 Tax=Ancylostoma TaxID=29169 RepID=A0A0C2CNL1_9BILA) HSP 1 Score: 123 bits (309), Expect = 9.570e-31 Identity = 72/202 (35.64%), Postives = 107/202 (52.97%), Query Frame = 0
Query: 1 MFKLVTIEDVLLVPARLFGYPRLEALEYVINKRLSDKVIPGVGLVIAFWEWVKVGQDSLQIHSGECSTKCTFRVVVFAPFEGEVLFARVSGAYNHGLFMEMGFFDAVFVPSENLPRPSHYDESERVWIWKPVFEEGADPQTYYMDVTNESVFRAMELMFEDSWRVPPSEKKEDGRNPMS--IVGALFDAVLQDNQGLGDPLW 200
MF L +ED + V G L IN+RLS+KV+P +GL I ++ ++VG + G TK FR+VVF PF EV+ ARV + +HGL + + FF+ + +P+E LP P +++SE+VW W+ E+G P YMD FR +E +F D V P+ E+ + S I+G + + GLG W
Sbjct: 1 MFVLALLEDTVAVKPHELGKELGSVLRRRINQRLSNKVVPELGLCICVYDLLEVGVTYILPGEGSGHTKVKFRLVVFRPFVDEVIQARVVSSNSHGLTLSVEFFEDIIIPAERLPEPHVFEQSEQVWYWEYPAEDGQPPARLYMDPGKTVRFRVVENIFRD---VKPNLTPEEAQKEKSYEIIGTMAET------GLGCVAW 193
BLAST of Ggra8194.t1 vs. uniprot
Match: B6K0P2 (DNA-directed RNA polymerase III complex subunit Rpc25 n=1 Tax=Schizosaccharomyces japonicus (strain yFS275 / FY16936) TaxID=402676 RepID=B6K0P2_SCHJY) HSP 1 Score: 121 bits (304), Expect = 4.470e-30 Identity = 72/209 (34.45%), Postives = 104/209 (49.76%), Query Frame = 0
Query: 1 MFKLVTIEDVLLVPARLFGYPRLEALEYVINKRLSDKVIPGVGLVIAFWEWVKVGQDSLQIHSGECSTKCTFRVVVFAPFEGEVLFARVSGAYNHGLFMEMGFFDAVFVPSENLPRPSHYDESERVWIWK-PVFEEGADPQTYYMDVTNESVFRAMELMFEDSWRVPPS--------EKKEDGRNPMSIVGALFDAVLQDNQGLGDPLW 200
MF L I DV+ + F P EAL INK+ ++KVI VGL IA ++++ +G+ ++ G FR++VF PF GEV+ R+ G+ + +GFFD +FVP E LP PS Y+ ER W+W+ P E +P +MDV E F+ F D PS + + + P S+V + GLG P W
Sbjct: 1 MFVLSVISDVVKIHPSDFWKPTKEALSDEINKKYANKVIQQVGLAIAIFDFLTIGEGIIKFGDGCSYMNVKFRLLVFRPFRGEVMLGRIKSCTELGIRVTLGFFDDIFVPKEMLPDPSVYNAQERAWVWRVPSEETDGEPSELFMDVGEEIRFQIESEHFIDISPSRPSANSAAATTDVRTEAEAPYSLVASC------SKDGLGIPAW 203
BLAST of Ggra8194.t1 vs. uniprot
Match: A0A0D8Y3L5 (RNA polymerase Rpb7 protein n=1 Tax=Dictyocaulus viviparus TaxID=29172 RepID=A0A0D8Y3L5_DICVI) HSP 1 Score: 119 bits (297), Expect = 6.590e-29 Identity = 66/202 (32.67%), Postives = 109/202 (53.96%), Query Frame = 0
Query: 1 MFKLVTIEDVLLVPARLFGYPRLEALEYVINKRLSDKVIPGVGLVIAFWEWVKVGQDSLQIHSGECSTKCTFRVVVFAPFEGEVLFARVSGAYNHGLFMEMGFFDAVFVPSENLPRPSHYDESERVWIWKPVFEEGADPQTYYMDVTNESVFRAMELMFEDSWRVPPSEKKEDGRNPMS--IVGALFDAVLQDNQGLGDPLW 200
MF L +ED +++ G L IN+RLS++++P +GL I ++ ++VG + G T+ FR+VVF PF EV+ ARV+ + + GL + + FF+ + +P++ LP P +++SE+VW W+ ++G P YMD FR +E +F D V P+ +D +N S I+G + + GLG W
Sbjct: 6 MFVLALLEDTIVIKPHELGIELGSVLRRRINQRLSNRIVPQLGLCICVYDLLEVGVTYILPGEGSGHTRVKFRLVVFRPFVDEVIQARVASSSSEGLKLSVEFFEDITIPADRLPEPHIFEQSEKVWYWEYPSDDGEPPARLYMDPGKIVRFRVVENIFRD---VKPNPTSDDVQNEKSYEIIGTMAET------GLGCVAW 198
BLAST of Ggra8194.t1 vs. uniprot
Match: DNA-directed RNA polymerase III subunit RPC8 isoform X1 n=2 Tax=Bemisia tabaci TaxID=7038 RepID=UPI0008F9DB49 (DNA-directed RNA polymerase III subunit RPC8 isoform X1 n=2 Tax=Bemisia tabaci TaxID=7038 RepID=UPI0008F9DB49) HSP 1 Score: 118 bits (295), Expect = 8.580e-29 Identity = 65/205 (31.71%), Postives = 107/205 (52.20%), Query Frame = 0
Query: 1 MFKLVTIEDVLLVPARLFGYPRLEALEYVINKRLSDKVIPGVGLVIAFWEWVKVGQDSLQIHSGECSTKCTFRVVVFAPFEGEVLFARVSGAYNHGLFMEMGFFDAVFVPSENLPRPSHYDESERVWIWKPVFEEGADPQTYYMDVTNESVFRAMELMFEDSWRVPPSEKKE-----DGRNPMSIVGALFDAVLQDNQGLGDPLW 200
MF +V ++DV+ P +F E +N +L++KVI VGL IA ++ +K+G + G TK FR +VF PF E++ ++ G+ + +GFFD + +PS +L PS +DE E+VW+W+ F+ D +MD+ FR + +F ++ V EK E + + P SI+G++ + GLG W
Sbjct: 1 MFVIVELKDVVRTPPAVFNKKLDETTAGHLNSKLANKVITNVGLCIALFDILKMGDSFIFPGDGASHTKVEFRFIVFRPFIDEIIVGKIKSCSKDGVCVTLGFFDDIMIPSTSLQHPSRFDEMEQVWVWQ--FDNDGDTHDLFMDIGESIRFRVVTEVFVETSPVTCPEKMEVSTEPESKVPYSIIGSISEP------GLGVLSW 197
BLAST of Ggra8194.t1 vs. uniprot
Match: A0A368FUD1 (Putative DNA-directed RNA polymerase n=1 Tax=Ancylostoma caninum TaxID=29170 RepID=A0A368FUD1_ANCCA) HSP 1 Score: 123 bits (308), Expect = 8.010e-28 Identity = 71/202 (35.15%), Postives = 107/202 (52.97%), Query Frame = 0
Query: 1 MFKLVTIEDVLLVPARLFGYPRLEALEYVINKRLSDKVIPGVGLVIAFWEWVKVGQDSLQIHSGECSTKCTFRVVVFAPFEGEVLFARVSGAYNHGLFMEMGFFDAVFVPSENLPRPSHYDESERVWIWKPVFEEGADPQTYYMDVTNESVFRAMELMFEDSWRVPPSEKKEDGRNPMS--IVGALFDAVLQDNQGLGDPLW 200
MF L +ED + V G L IN+RLS+K++P +GL I ++ ++VG + G TK FR+VVF PF EV+ ARV + +HGL + + FF+ + +P+E LP P +++SE+VW W+ E+G P YMD FR +E +F D V P+ E+ + S I+G + + GLG W
Sbjct: 1739 MFVLALLEDTVAVKPHELGKELGSVLRRRINQRLSNKIVPELGLCICVYDLLEVGVTYILPGEGSGHTKVKFRLVVFRPFVDEVIQARVVSSNSHGLTLSVEFFEDIIIPAERLPEPHVFEQSEQVWYWEYPAEDGQPPARLYMDPGKTVRFRVVENIFRD---VKPNLTPEEAQKEKSYEIIGTMAET------GLGCVAW 1931
BLAST of Ggra8194.t1 vs. uniprot
Match: A0A6A6ISN4 (DNA-directed RNA polymeras-like protein III 25 kDa polypeptide n=1 Tax=Trematosphaeria pertusa TaxID=390896 RepID=A0A6A6ISN4_9PLEO) HSP 1 Score: 115 bits (289), Expect = 9.900e-28 Identity = 66/201 (32.84%), Postives = 104/201 (51.74%), Query Frame = 0
Query: 1 MFKLVTIEDVLLVPARLFGYPRLEALEYVINKRLSDKVIPGVGLVIAFWEWVKVGQDSLQIHSGECSTKCTFRVVVFAPFEGEVLFARVSGAYNHGLFMEMGFFDAVFVPSENLPRPSHYDESERVWIWKPVFEEGADPQTYYMDVTNESVFRAMELMFEDSWRVPPSEKKEDGRNPMSIVGALFDAVLQDNQ-GLGDPLW 200
MF L TIED++ +P R FG P +AL+ IN + S+K+I VGL + W+ ++ + + +G + FR+ VF PF GE+L+ R+ A G+ +++ F VF+P +NL S +DE E WIW+P E GA+ + D +FR + + D + P +K + + + NQ GLG LW
Sbjct: 1 MFILTTIEDLIQIPPRDFGKPSAQALKDAINAKYSNKIIQKVGLCLCMWDLLQTSEGLIGHGTGLVNVNVEFRMTVFRPFRGEILYGRIKSANEEGIVIDLDFTSEVFIPHQNLFENSTFDEGESTWIWRP--EGGAE---LFFDKGEPVLFRVEQEEWID--QKPTMVRKNEQGEVEETRDTAWRLIGSMNQSGLGPTLW 194
BLAST of Ggra8194.t1 vs. uniprot
Match: A0A0N4W8X7 (Uncharacterized protein n=2 Tax=Haemonchus TaxID=6288 RepID=A0A0N4W8X7_HAEPC) HSP 1 Score: 115 bits (288), Expect = 1.190e-27 Identity = 65/202 (32.18%), Postives = 107/202 (52.97%), Query Frame = 0
Query: 1 MFKLVTIEDVLLVPARLFGYPRLEALEYVINKRLSDKVIPGVGLVIAFWEWVKVGQDSLQIHSGECSTKCTFRVVVFAPFEGEVLFARVSGAYNHGLFMEMGFFDAVFVPSENLPRPSHYDESERVWIWKPVFEEGADPQTYYMDVTNESVFRAMELMFEDSWRVPPSEKKEDGRNPMS--IVGALFDAVLQDNQGLGDPLW 200
MF L +ED + + G + IN+RLS+K++P +GL I ++ ++VG + G T+ FR+VVF P+ EV+ ARV + + GL + + FF+ + +P+E LP P +++SE++W W+ E+G P YMD FR +E +F+D V P+ E+ + S I+G + + GLG W
Sbjct: 1 MFVLALLEDTITIKPHELGKEIGSVVRRRINQRLSNKIVPDLGLCICVYDLLEVGVAYILPGEGSGHTRVKFRLVVFRPYVDEVIQARVVSSTSQGLTLSVEFFEDITIPAERLPEPHVFEQSEQIWYWEYPSEDGEPPAKLYMDPGKTVRFRVVENIFKD---VKPNLTPEEAQKEKSYEIIGTMAET------GLGCVAW 193
BLAST of Ggra8194.t1 vs. uniprot
Match: A0A2V1DMR2 (DNA-directed RNA polymeras-like protein III 25 kDa polypeptide n=1 Tax=Periconia macrospinosa TaxID=97972 RepID=A0A2V1DMR2_9PLEO) HSP 1 Score: 115 bits (287), Expect = 1.950e-27 Identity = 64/201 (31.84%), Postives = 107/201 (53.23%), Query Frame = 0
Query: 1 MFKLVTIEDVLLVPARLFGYPRLEALEYVINKRLSDKVIPGVGLVIAFWEWVKVGQDSLQIHSGECSTKCTFRVVVFAPFEGEVLFARVSGAYNHGLFMEMGFFDAVFVPSENLPRPSHYDESERVWIWKPVFEEGADPQTYYMDVTNESVFRAMELMFEDSWRVPPSEKKEDGRNPMSIVGALFDAV-LQDNQGLGDPLW 200
MF L TIED++ + + FG P +A++ IN + S+KVI VGL + W+ ++ + + +G + FR+ VF PF GE+L+ R+ + G+ +++ F VFVP NL S +D++E+ WIWK E G++ + D +F+ + D + P E+K+D N + G + + L + GLG LW
Sbjct: 1 MFILTTIEDLIQITPQEFGKPSAQAIKDAINTKYSNKVIQNVGLCLCLWDILQTSEGLIGHGTGLVNVNVEFRMTVFRPFRGEILYGRIKSSNEEGIILDLDFTSEVFVPYTNLFEGSDFDQTEQTWIWK--HEGGSE---LFFDRGESVLFKVDREEWYD--QKPTIEQKDDEGNVIETRGTAWRLIGLMNFSGLGPTLW 194 The following BLAST results are available for this feature:
BLAST of Ggra8194.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra8194.t1 ID=Ggra8194.t1|Name=Ggra8194.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=284bpback to top |