Ggra8180.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8180.t1
Unique NameGgra8180.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length113
Homology
BLAST of Ggra8180.t1 vs. uniprot
Match: A0A2V3J5Z8 (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5Z8_9FLOR)

HSP 1 Score: 152 bits (385), Expect = 1.960e-43
Identity = 73/96 (76.04%), Postives = 88/96 (91.67%), Query Frame = 0
Query:    1 MGSRAESEPLTLILLDGTSRQAKNLDRFMPSSLPRVRIGKASMKSWLNPIRRQTEKHRVCTAQAAAMILQELGDTETSEVIENAVRQVVRISCSRR 96
            +GS  E+EPLTLILLDGTSRQAKNLDRFMP  +PR+RI KAS++SWLNPIR+QTE+HRVCTAQAAAMIL+ELGD +TS+ IENAV+ VVRI+CS++
Sbjct:  211 LGSHEENEPLTLILLDGTSRQAKNLDRFMPGDIPRIRISKASIQSWLNPIRKQTEEHRVCTAQAAAMILRELGDFKTSDAIENAVKTVVRIACSQK 306          
BLAST of Ggra8180.t1 vs. uniprot
Match: R7QBX9 (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBX9_CHOCR)

HSP 1 Score: 138 bits (348), Expect = 9.440e-36
Identity = 70/96 (72.92%), Postives = 83/96 (86.46%), Query Frame = 0
Query:    1 MGSRAESEPLTLILLDGTSRQAKNLDRFMPSSLPRVRIGKASMKSWLNPIRRQTEKHRVCTAQAAAMILQELGDTETSEVIENAVRQVVRISCSRR 96
            MGS+ E  PLTL+LLDGTSRQAKN DRFMPS +PRVRI + S++SWL+PIRRQTE+HRVCTAQAAAMIL ELGD +TSE IE+AVR V++I+  RR
Sbjct:  700 MGSKGEG-PLTLVLLDGTSRQAKNFDRFMPSDIPRVRIRETSVRSWLDPIRRQTEEHRVCTAQAAAMILSELGDEDTSEAIESAVRSVLKIAEMRR 794          
BLAST of Ggra8180.t1 vs. uniprot
Match: A0A7J6KW15 (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Perkinsus chesapeaki TaxID=330153 RepID=A0A7J6KW15_PERCH)

HSP 1 Score: 56.6 bits (135), Expect = 5.570e-7
Identity = 32/85 (37.65%), Postives = 51/85 (60.00%), Query Frame = 0
Query:    6 ESEPLTLILLDGTSRQAKNLDRFMPSSLPRVRIGKASMKSWLNPIRRQTEKHRVCTAQAAAMILQELGDTETSEVIENAVRQVVR 90
            E + L +IL+DGT +QAK L + +  S+PRVR+   ++  ++   R Q+   RVCT +AAA+++ ELG T     +   +  VVR
Sbjct:  210 EGQRLLIILVDGTWKQAKRLQKRVDRSVPRVRLMPTTLSRFM--CRTQSRADRVCTVEAAALLMSELGYTTEEYRLLEGLEVVVR 292          
BLAST of Ggra8180.t1 vs. uniprot
Match: A0A7J6LPF6 (tRNA-uridine aminocarboxypropyltransferase n=2 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6LPF6_PEROL)

HSP 1 Score: 56.2 bits (134), Expect = 7.850e-7
Identity = 27/69 (39.13%), Postives = 47/69 (68.12%), Query Frame = 0
Query:    5 AESEPLTLILLDGTSRQAKNLDRFMPSSLPRVRIGKASMKSWLNPIRRQTEKHRVCTAQAAAMILQELG 73
            AE E + +IL+DGT +QAK L + +  S+PR+R+   ++  ++   R Q++  RVCT +AAA+++ E+G
Sbjct: 1436 AEGESVLIILVDGTWKQAKRLQKRIDRSVPRIRLMPTTLSRFM--CRTQSQADRVCTVEAAALLMSEMG 1502          
BLAST of Ggra8180.t1 vs. uniprot
Match: C5KDY3 (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5KDY3_PERM5)

HSP 1 Score: 55.8 bits (133), Expect = 1.040e-6
Identity = 29/67 (43.28%), Postives = 46/67 (68.66%), Query Frame = 0
Query:    7 SEPLTLILLDGTSRQAKNLDRFMPSSLPRVRIGKASMKSWLNPIRRQTEKHRVCTAQAAAMILQELG 73
            +E L +IL+DGT +QAK L + +  S+PRVR+   ++  +L   R Q++  RVCT +AAA+++ ELG
Sbjct:  208 NEKLLIILVDGTWKQAKRLQKRIDHSVPRVRLMPTTLSRFL--CRTQSQADRVCTVEAAALLVSELG 272          
BLAST of Ggra8180.t1 vs. uniprot
Match: A0A7J6P8U1 (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6P8U1_PEROL)

HSP 1 Score: 54.3 bits (129), Expect = 3.570e-6
Identity = 26/68 (38.24%), Postives = 46/68 (67.65%), Query Frame = 0
Query:    6 ESEPLTLILLDGTSRQAKNLDRFMPSSLPRVRIGKASMKSWLNPIRRQTEKHRVCTAQAAAMILQELG 73
            E E + +IL+DGT +QAK L + +  S+PR+R+   ++  ++   R Q++  RVCT +AAA+++ E+G
Sbjct:  225 EGERVLIILVDGTWKQAKRLQKRIDRSVPRIRLMPTTLSRFM--CRTQSQADRVCTVEAAALLMSEMG 290          
The following BLAST results are available for this feature:
BLAST of Ggra8180.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3J5Z81.960e-4376.04tRNA-uridine aminocarboxypropyltransferase n=1 Tax... [more]
R7QBX99.440e-3672.92tRNA-uridine aminocarboxypropyltransferase n=1 Tax... [more]
A0A7J6KW155.570e-737.65tRNA-uridine aminocarboxypropyltransferase n=1 Tax... [more]
A0A7J6LPF67.850e-739.13tRNA-uridine aminocarboxypropyltransferase n=2 Tax... [more]
C5KDY31.040e-643.28tRNA-uridine aminocarboxypropyltransferase n=1 Tax... [more]
A0A7J6P8U13.570e-638.24tRNA-uridine aminocarboxypropyltransferase n=1 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005636DTWPFAMPF03942DTWcoord: 5..87
e-value: 3.5E-11
score: 43.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000872_piloncontigtig00000872_pilon:49412..49839 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8180.t1Ggra8180.t1Gracilaria gracilis GNS1m malemRNAtig00000872_pilon 49412..49839 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8180.t1 ID=Ggra8180.t1|Name=Ggra8180.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=113bp
MGSRAESEPLTLILLDGTSRQAKNLDRFMPSSLPRVRIGKASMKSWLNPI
RRQTEKHRVCTAQAAAMILQELGDTETSEVIENAVRQVVRISCSRRAQYQ
KENAETLLDEKD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005636DTW