Ggra8169.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra8169.t1
Unique Name	Ggra8169.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	347

Homology

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BLAST of Ggra8169.t1 vs. uniprot
Match: A0A2V3J624 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J624_9FLOR)

HSP 1 Score: 457 bits (1176), Expect = 7.250e-159
Identity = 219/346 (63.29%), Postives = 282/346 (81.50%), Query Frame = 0

Query:    1 MEEHSDQEDVDVFVSPKRFGGHTPAAKAIKQKVFEDNLKRAAQETQSQRDKQFSTESAPSVPGYYEEDPAKGVHRKVARNNRLSIAALIANYIASFLALPILGVGIWVALKQRNGGITTYTARAGHVVKSPLALGLLLIFGAGFLLIFSLFFGVRHLSPSINEGLGPEKRKTFLAYQFLALGTMAILTIVLLSTVDPLRHVKTYGVTKTRWIEMSLLNPARICRYEIENDCAGYRNMSCADPSARANRACPGHFCSDTCRAGSSEPPRLKLKGCEACYKAFQTDRPLQRCKANEGSGVSSVACLASLKSDLLVFFTLSIIASSTGLIVLFFVTVLGAVSSLISFEL 346
            ME ++DQ+DV+V+VSPK FGGHTP AKA +QKVFE+NLKRAAQE ++Q++ Q     +    G  + D  K VHR V RNN+LSI  LI NY+A+F + P+L +GIWVALK+RNGG++ Y ARAG ++KSPL LG LL+FGAGFLLIFS FFGV+ LSP+IN+G+ PEK+K FL YQ +A+ +M +LT+VLLSTVDPLRH KTYGVTKT WIEMS+ +P  +CRYE+ENDCAGYR+M+CADP+AR +RACPGHFCS+TC AGS + PRLK++GC+ACYK F  ++PL RCK +EGSG+SS ACL++L+SD++ F+ ++IIAS  GL+ + FVT+ GAVSSLISFEL
Sbjct:    1 MEGNNDQDDVNVYVSPKHFGGHTPGAKATRQKVFEENLKRAAQEREAQKENQMRMGMSTHAQGLDDMDGNKNVHRAVGRNNKLSIVTLIINYLAAFFSFPVLSMGIWVALKERNGGVSAYVARAGQLIKSPLVLGFLLMFGAGFLLIFSYFFGVKELSPAINQGMSPEKKKAFLVYQLMAIVSMVLLTLVLLSTVDPLRHAKTYGVTKTNWIEMSVSHPGGVCRYEMENDCAGYRDMACADPAARRSRACPGHFCSETCGAGSKDSPRLKVRGCDACYKDFAREQPLARCKTSEGSGISSSACLSTLRSDVIRFYLITIIASGVGLLAMLFVTLFGAVSSLISFEL 346

The following BLAST results are available for this feature:

BLAST of Ggra8169.t1 vs. uniprot

BLAST of Ggra8169.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J624	7.250e-159	63.29	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..60
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 111..129
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 173..195
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 153..172
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 130..152
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 311..344
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 345..346
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..84
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 196..310
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 85..110
None	No IPR available	TMHMM	TMhelix		coord: 88..110
None	No IPR available	TMHMM	TMhelix		coord: 131..153
None	No IPR available	TMHMM	TMhelix		coord: 311..333
None	No IPR available	TMHMM	TMhelix		coord: 173..195

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000872_pilon	contig	tig00000872_pilon:32415..33566 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra8169.t1	Ggra8169.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000872_pilon 32415..33566 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra8169.t1 ID=Ggra8169.t1|Name=Ggra8169.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=347bp
MEEHSDQEDVDVFVSPKRFGGHTPAAKAIKQKVFEDNLKRAAQETQSQRD
KQFSTESAPSVPGYYEEDPAKGVHRKVARNNRLSIAALIANYIASFLALP
ILGVGIWVALKQRNGGITTYTARAGHVVKSPLALGLLLIFGAGFLLIFSL
FFGVRHLSPSINEGLGPEKRKTFLAYQFLALGTMAILTIVLLSTVDPLRH
VKTYGVTKTRWIEMSLLNPARICRYEIENDCAGYRNMSCADPSARANRAC
PGHFCSDTCRAGSSEPPRLKLKGCEACYKAFQTDRPLQRCKANEGSGVSS
VACLASLKSDLLVFFTLSIIASSTGLIVLFFVTVLGAVSSLISFEL*