Ggra8163.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8163.t1
Unique NameGgra8163.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length271
Homology
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BLAST of Ggra8163.t1 vs. uniprot
Match: R7QM86 (Alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglucosaminyltransferase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QM86_CHOCR)

HSP 1 Score: 169 bits (427), Expect = 7.540e-48
Identity = 89/218 (40.83%), Postives = 137/218 (62.84%), Query Frame = 0 
Query:   14 GSDAALGNELSQAELHALNISR-LQSLPISQ---DNPWRGAGRRLRHDVIRSVSGCGGTFRKAVAHGDAVQVRYAMWKDDRIIDSSPS---SVNVVAGSSQIPRKLDSALTGLCAGEAVRVRMAKTDTLLLVEK--IGKL-TENEREEELDSLARSITALPARRGHDCSLECSREGMQCAQHALALVNNCPRLREAFGCEQCETAAVGSAGADMPAFV 221
            G+D  LG  L+  +  +L + R   ++P  +   +NPWRGAG R R+D++ SVSGCGGT+R  +  GD   + Y++ +DD ++  + S   ++++V GS Q+  +++S + GLCAGE +R   A  D +L+V    IGKL  +NER + L+ L+  I +L A +G  C L C R+G+ CAQ    ++N CPRL++A+ C  CETAA GS+G DMP +V
Sbjct:    6 GTDRVLGKALAAGDAKSLGLPRHFTTVPSGRKGLNNPWRGAGNRRRNDLLSSVSGCGGTYRPKLKDGDTASLYYSLRQDDNLVTDASSKGHAIDLVLGSGQLGDEIESRIRGLCAGETMRY--ASNDGILIVHVAYIGKLGVQNERLQRLEKLSHIIKSLRASKGVSCELACRRKGLICAQDGFKIINTCPRLKQAYPCRSCETAAAGSSGPDMPCYV 221
The following BLAST results are available for this feature:
BLAST of Ggra8163.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7QM867.540e-4840.83Alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.50.40coord: 72..135
e-value: 7.4E-8
score: 34.1
NoneNo IPR availableSUPERFAMILY54534FKBP-likecoord: 73..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000872_piloncontigtig00000872_pilon:12332..13262 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8163.t1Ggra8163.t1Gracilaria gracilis GNS1m malemRNAtig00000872_pilon 12332..13262 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8163.t1 ID=Ggra8163.t1|Name=Ggra8163.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=271bp
MAATGIVYNRFQIGSDAALGNELSQAELHALNISRLQSLPISQDNPWRGA
GRRLRHDVIRSVSGCGGTFRKAVAHGDAVQVRYAMWKDDRIIDSSPSSVN
VVAGSSQIPRKLDSALTGLCAGEAVRVRMAKTDTLLLVEKIGKLTENERE
EELDSLARSITALPARRGHDCSLECSREGMQCAQHALALVNNCPRLREAF
GCEQCETAAVGSAGADMPAFVRDLVQRRVQEHIKNRFNNRAELTHAWTAP
KVKKSIGSVEACVRTSARML*
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