Ggra815.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra815.t1
Unique NameGgra815.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length382
Homology
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BLAST of Ggra815.t1 vs. uniprot
Match: A0A2V3IFG1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFG1_9FLOR)

HSP 1 Score: 404 bits (1037), Expect = 7.480e-137
Identity = 259/394 (65.74%), Postives = 284/394 (72.08%), Query Frame = 0 
Query:    3 ASKVLFITLLLATTVWGSEEELPSLYRQ-FSPFFGANCKSKGCGIGQGPFGPIXXXXXXXXXXXXIPPGVNIPGVPSTPLPPAPPVCCSPDGCLNGYRTECVVGALSPRLASQGYFVASGSCSGELTRFDCRRAEFVCSGNRARCVFRQCPSPPRPMPPGGGXXXXXXXXXXXXXXXXXXXXXXXXXXQGKVCKHGYCKFYPKYVDRQSVDGDSDLEDLGPKVDIEEPYFQLIDRMINLSN---TDLPISVRSK-----------SKRNFFPIFPGAFPGAXXXXGTXXXXXXXXXXXXXXGGNFFFGGNCKSKGCGIRQGPFGPXXXXXXXXXXXXPVPPGFAVGPATPSPAPXXXXXRVPDRIPPFVPPPPNSCCFVRPCNTQRLCRCVLNQ 381
            A + LFI  +LA    G+EEEL SLYRQ F+PFFGANCKSKGCGI  GPFGP+XXXXXXXXXXX +PPGV++PGVP+T      PVCC+PDGC NGYRTEC+ GALSPRLA QGYFVASGSCSG LTRFDCRRAE VCSGNRARCVFR CP PPRPM                     XXXXXXXXXX  K CK G+CK YP YVDRQ+   +  + +LGPKVD EEPYF+LIDRMINLS    +D+PIS+R K           SK   F  FPGAFP     X  XXXXX          G  FFGGNCKSKGCGI QGPFGPXXXXXXXXXXXXPVPPGF++GPATP+P        +PDRIPPFVPPPPNSCCFVRPC TQRLCRCVLN+
Sbjct:    3 AFRFLFIAFVLANVAKGAEEELSSLYRQAFNPFFGANCKSKGCGIVNGPFGPVXXXXXXXXXXXPVPPGVSVPGVPATXXXXXXPVCCTPDGCFNGYRTECLTGALSPRLAVQGYFVASGSCSGPLTRFDCRRAENVCSGNRARCVFRGCPPPPRPM---------------------XXXXXXXXXXXPKPCKKGHCKPYPVYVDRQATTDEEIMSNLGPKVDTEEPYFKLIDRMINLSYGVPSDIPISLRQKFKFKGGFGGCKSKGCPFGAFPGAFPQGLTTXXXXXXXXGGQ-------GGLFFGGNCKSKGCGIVQGPFGPXXXXXXXXXXXXPVPPGFSIGPATPTPQAPTPAPTLPDRIPPFVPPPPNSCCFVRPCATQRLCRCVLNK 368
The following BLAST results are available for this feature:
BLAST of Ggra815.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IFG17.480e-13765.74Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 157..187
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 157..189
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..381
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000906_piloncontigtig00000906_pilon:160663..161808 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra815.t1Ggra815.t1Gracilaria gracilis GNS1m malemRNAtig00000906_pilon 160663..161808 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra815.t1 ID=Ggra815.t1|Name=Ggra815.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=382bp
MIASKVLFITLLLATTVWGSEEELPSLYRQFSPFFGANCKSKGCGIGQGP
FGPIFFGGACKSKGCPIPPGVNIPGVPSTPLPPAPPVCCSPDGCLNGYRT
ECVVGALSPRLASQGYFVASGSCSGELTRFDCRRAEFVCSGNRARCVFRQ
CPSPPRPMPPGGGPMPPRGGPMPPRGGPMPPRGGPRPPRQGKVCKHGYCK
FYPKYVDRQSVDGDSDLEDLGPKVDIEEPYFQLIDRMINLSNTDLPISVR
SKSKRNFFPIFPGAFPGAFPGAGTGVFPGAGTPFNPGFGGNFFFGGNCKS
KGCGIRQGPFGPVYFGGACKSKGCPVPPGFAVGPATPSPAPASPAPRVPD
RIPPFVPPPPNSCCFVRPCNTQRLCRCVLNQ*
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