Ggra8108.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8108.t1
Unique NameGgra8108.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1036
Homology
BLAST of Ggra8108.t1 vs. uniprot
Match: A0A2V3J1V4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1V4_9FLOR)

HSP 1 Score: 679 bits (1751), Expect = 1.270e-225
Identity = 490/1056 (46.40%), Postives = 620/1056 (58.71%), Query Frame = 0
Query:   12 KDQEDSAAEH-MEGITAPPASPADTNPSIANRTADKETDRLGLNDSTTMKPREITSPAGHDLPPRHAQSVSPKVGHPEKAATLPLVSI--------EAQSGSVDKLAVDEPDLDKTTSAEDKPLDASPQNPMMKQNSDFSEQTADAAEVSISAQKLPSDERKATIPSEGTHT-KQAP-DGTNPPSHPSVAQREPEESAPKGXXXXXXXXXXEPDAESNAA--HGLSSSDNP-VSSPTELKILKNDEKPSEEQPETGEEDKPLLLPKLSDDEVEPGKAESTADCGKHLGSTSPQ-HFSKGQTEDHLLMDSEPGKVSGT------NQEESVIKEEEREMQKTESI---VDHPPGSRTADRAEDLSTGGREGHESEDVVGGKKAHEVGIAESSSDQAKQDESAKKESISEGKPRGL--TPVSSAANEYGAKDQGLSKGANSSDGNDDIPTGVGNERSNSKPNTKPVVERIEPLKETPATEQGAAPMDIDSA------GQQLEAIPSNEKMGDEKDSEDINIIAGKGPIDVSKIDNKTSEDVEMTENTPSKTDAGLEKQGQAEDDNTAQIKKSRKNVHKATQSQLLRARSNSRGGAPDSSFDSGGRQDSVTQEAGKAPAQKSSDTASQASKGKEAEGAPEDDGPRPVMEAKGLAMRVGNAVFVTEDQLDQPKIARLNDKKVLPFERLTFKELRTYNRDQLRAYCFAYGMERRKKTEMEADMARYLSYWNRGKPEFALHEYIPTSGRIIDRDEFFGTRGSQANQSAASLGGSSYSGVDVNRRFGSRMQSSSGGYGDKGSGPGVHGSVTGNLQTSPSTLSLGNANRNARAGSTPTSLPRGFGTSFKQRVHARQASAKFKAAYNGAGDTIVNVVENAAAYFEGKDSPEVIADQTKSFARYQFNVDLLTEIFDGPIQEDVEVLKVSTVKANGNMEGTVAQNERGNNPTTSSTQTKTNVMFDIAKRLLSNKRSSHQAELDSFETNLKRAEEKAKHTERRNMRLFQRLERAETVAQVEAIKKEFETEFGTPVDFTSRPVVRRKIDKSLPPLVIPDDQSRILRFTFL 1035
            + Q+ S  +H MEGITAPPASP + NPS++ + +D+ T       +   +P+   + +         +   PK G  +   + P  +         E  SG   + A DEP       +E+    ++P++    ++++         E S   Q+  +DE K T PSE  H  K  P +  +P   P  +  EPE                +   E+N    H L S+ +P   S TE         PS E+PET   +   +LP  +D   +P  A+         G+ + Q H +    +D + +D+EP     T      N+ ++    EE+E+Q   S    +     + +  RA+ + +    G  S D   G  +H     +  S  A  D S    SI++     +  T  + A N+                          N R    P  +     I+  +    TEQ  + MDID        G +    PS +    E  + +        P + + +   + EDV MTE +P+K D G + +  A ++N+A  KKSRK   K +QS+L RARS+SRGGA DSSFDSGG+QDS    +     QKS++ +  A K  E     +D GPRPVMEAKGL MRVGNAVFVTE+QLD  K ARLNDKKVLPFE+LTFKELRTYNRDQLRAYCFAYGMERRKKTEMEADMARYLSYWNRGKP FA+HEYIPTSGR  DRD+F  +RGS ANQS+ASLGGS+Y GVD +RR+GSR QS SG   DK +  G  G   GN QTSP   S GNANRN+RAG TP SL RGFGTSFKQRVHARQASAKFKAAYNGAGDTIVNVVENAAAYFEGKDS EVIADQTKSF RYQ NVDLLTEIFDGPIQ D ++ K     ANGN+EG++ +  R ++ T  +   K++VM+DIAKRLLSNKR +H+AELDSFE+NLKR EE+AKHTERRNM+LFQ+LERAET  QVE+IKKEFE EFGT +D TSRPVVRRKIDK+LPPLVIPD+QSRILRFTFL
Sbjct:    6 QQQQPSTVQHQMEGITAPPASPVEPNPSMSAK-SDQATVEKPQGQAQEEQPQVPAASSAQPALSTEMKEKDPKQGQVQSQPSEPKAADDGVKYTEPERASGGPGE-ASDEP----KNPSEECQTSSAPKHNSPLESAEMKHAAGHQEEHSAIPQEKLADEPKETPPSEAKHVGKTEPSEKLHPNDVPQSSSAEPE---------------LQKSDETNDVDKHPLLSASSPDTHSKTESVKHIGTTLPSSERPETARAEN--ILPPSTD---QPASAQEQPSNQNKSGADAQQPHANPMAADDPVEIDTEPYIKENTSDRHANNKRDASSVSEEKELQAKPSEPAPLHEKDTTESLSRAKSVKSEIPNGTSSPDGEPGGGSHAGVFEQKMSPSAFVDTSP---SIAKPGDASMEATEQNGADNKXXXXXXXXXXXXXXXXXXXXXXXXAQNARRELDPEAESKYAGIKSKEGEMLTEQNVSVMDIDDTSVPGTKGAKTPITPSIKPGAAEMQNANEKTTPMTKPSETASV---SREDVVMTEISPAKPDTGKKTKPSALEENSASGKKSRKTARKGSQSRLSRARSSSRGGAGDSSFDSGGKQDSAAPSSSYLHPQKSTEGSPAAPKNIEV---VDDGGPRPVMEAKGLVMRVGNAVFVTENQLDDLKTARLNDKKVLPFEKLTFKELRTYNRDQLRAYCFAYGMERRKKTEMEADMARYLSYWNRGKPGFAIHEYIPTSGRAFDRDDFLTSRGSHANQSSASLGGSTYGGVDSSRRYGSRPQSGSGLLQDKHNASGGLG--PGNPQTSPPAPSAGNANRNSRAGGTPASLQRGFGTSFKQRVHARQASAKFKAAYNGAGDTIVNVVENAAAYFEGKDSSEVIADQTKSFERYQLNVDLLTEIFDGPIQSDADLPKGHVAHANGNIEGSLGRMGRRSSATKPNITGKSDVMYDIAKRLLSNKRDAHKAELDSFESNLKRVEEEAKHTERRNMKLFQKLERAETQEQVESIKKEFEKEFGTSMDCTSRPVVRRKIDKTLPPLVIPDEQSRILRFTFL 1024          
BLAST of Ggra8108.t1 vs. uniprot
Match: R7QSD5 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSD5_CHOCR)

HSP 1 Score: 271 bits (693), Expect = 5.300e-74
Identity = 185/490 (37.76%), Postives = 261/490 (53.27%), Query Frame = 0
Query:  616 DDGPRPVMEAKGLAMRVGNAVFVTEDQLDQPKIARLNDKKVLPFERLTFKELRTYNRDQLRAYCFAYGMERRKKTEMEADMARYLSYWNRGKPEFALHEYIPTSGRIIDRDEFFG-------TRGSQANQSAASLGGS-SYSGVDVNRRFGSRMQSSSGGYGDKGSG------------------------------------------PGVHGSVTGNLQTSPSTL------------SLGNANRNARAGSTPTSLPRGFGTSFKQRVHARQASAKFKAAYNGAGDTIVNVVENAAAYFEGKDSPEVIADQTKSFARYQFNVDLLTEIFDGPIQ--EDVEVLKVSTVKANGNME---------GTVAQNERGNNPTTSSTQTKTNVMFDIAKRLLSNKRSSHQAELDSFETNLKRAEEKAKHTERRNMRLFQRLERAETVAQVEAIKKEFETEFGTPVDFTSRPVVRRKIDKSLPPLVIPDDQSRILRF 1032
            DD PRPVM  KGL M VG++VFVT DQL+  K  R+  K + P E LTF+++ +YNRDQLR YC+ Y   RRKK+EME DMAR++S WN GKP F   EYIP +   +D   F         +  S+A QSA     + +  G+  +   G  +    GG   K S                                           P     + G L T+ S+             S G+++++ R      ++P+G+ TS KQ++HAR A  KFKAAYNGAG  IV++VENAAAYFEGKDS EVI+D+ KS+ RYQ NVDLLTEIFDGP+   E  +   VS  K  G+ E           V   +   N   +  +    V   +AKR+ +  R     +++++E   ++AE+  + ++R NMRLFQRLERAE+  ++E ++++FE E    +     P++RRK+DKSLP + +PD++  ILRF
Sbjct:  323 DDKPRPVMTEKGLRMVVGDSVFVTADQLEDIKRQRMRGKNLKPIEELTFQDILSYNRDQLRCYCYIYSTPRRKKSEMEVDMARFVSLWNEGKPGFVFAEYIPKNSGRMDASAFVHRLTTNDRSSASRAQQSAGGQNSTEAMKGLPADNTPGKPI----GGAHPKSSTKTPPRTSVRASPPAALPASAKRPPPRPASIQPSPIRPNLPPRPPSSERLVGALPTNQSSFPTQASGSGAGRNSAGSSSKSGRTSMPVQNMPQGYNTSHKQKMHARTAGIKFKAAYNGAGPAIVHIVENAAAYFEGKDSAEVISDRAKSYERYQLNVDLLTEIFDGPLSDFESDDNSIVSPGKEIGHTEIRAEGEAVLKDVHMVDVNGNDIKAPEEV---VSQQLAKRMDAKARGDVNIDMEAWEQAYRKAEKLTQESDRTNMRLFQRLERAESEQEIETVRRDFERENDIRLPGAPPPLIRRKLDKSLPAMQMPDNKCNILRF 805          
BLAST of Ggra8108.t1 vs. uniprot
Match: M2XRR6 (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XRR6_GALSU)

HSP 1 Score: 102 bits (253), Expect = 4.880e-20
Identity = 77/262 (29.39%), Postives = 125/262 (47.71%), Query Frame = 0
Query:  624 EAKGLAMRVGNAVFVTEDQLDQPKIARLNDKKVLPFERLTFKELRTYNRDQLRAYCFAYGMERRKKTEMEADMARYLSYWNRGKPEFALHEYIPTSGRIIDRDEF---------FGTRGSQANQSAASLGGSSYSGVDVNRRFGSRMQSSSGGYGDKGSGPGVHGSVTGNLQTSPSTLSLGNANRNARAGSTPTSLPRGF---GTSFKQRVHARQASAKFKAAYNGAGDTIVNVVENAAAYFEGKDSPEVIADQTKSFARYQ 873
            E   +A  + N  F  +D L +PK  RL+++ V P E +TF EL++YNRDQLRAYC+ YG+ R+KK EME DMARY S ++ G P + L  +      ++ ++           F         S+  L G+S S         + +++++ GY         +      +    + ++   A    R   +  S+ +      ++  QR HARQ +AK++ A +G G   V VV NA +YF   D       + ++F RY+
Sbjct:   15 EGGKVARIIDNIEFRLKDDLSEPKRRRLDERGVKPVEEVTFAELKSYNRDQLRAYCYIYGIPRKKKAEMELDMARYASAFHPGDPSYDLATFENVESTLLPKNSSPTNNLHSTPFSRSSIYYQPSSTDLDGASVS----QPLRPANIRNANLGYPQSHYNNNFNVGRGERIGVDSTAMNFRKATPFRRVAPSSRSIVKQRIEKNSTKNQREHARQTAAKYRMALDGLGPLKVPVVANAGSYFRSFDEVSEKKIRDEAFERYE 272          
BLAST of Ggra8108.t1 vs. uniprot
Match: R7QFX0 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFX0_CHOCR)

HSP 1 Score: 84.7 bits (208), Expect = 1.610e-13
Identity = 41/98 (41.84%), Postives = 59/98 (60.20%), Query Frame = 0
Query:  621 PVMEAKGLAMRVGNAVFVTEDQLDQPKIARLNDKKVLPFERLTFKELRTYNRDQLRAYCFAYGMERRKKTEMEADMARYLSYWNRGKPEFALHEYIPT 718
            P  EA G+  ++        +QL   KI RL  +K+ P E LTF +++ YNR+QLRAYC  YG+ R+KK EME DMARY + ++   P +   ++ PT
Sbjct:  176 PTYEADGIQFKI-------LEQLPDTKINRLKTEKIKPIESLTFSDIKAYNRNQLRAYCSVYGIRRKKKAEMERDMARYAALFHPNDPAYDFSKFAPT 266          
BLAST of Ggra8108.t1 vs. uniprot
Match: A0A2V3J332 (Beta-glucuronosyltransferase GlcAT14B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J332_9FLOR)

HSP 1 Score: 80.5 bits (197), Expect = 1.280e-11
Identity = 42/99 (42.42%), Postives = 58/99 (58.59%), Query Frame = 0
Query:  620 RPVMEAKGLAMRVGNAVFVTEDQLDQPKIARLNDKKVLPFERLTFKELRTYNRDQLRAYCFAYGMERRKKTEMEADMARYLSYWNRGKPEFALHEYIPT 718
            +PV EA G+        F    QL   KI RL        E LTF +++TYNR+QLRAYC  YG+ R+KK +ME DMARY + ++   PE+ + ++ PT
Sbjct:  662 QPVYEADGIQ-------FKLLSQLPDQKIKRLRXXXXXXXEDLTFTDIKTYNRNQLRAYCSVYGIRRKKKADMERDMARYAALFHASDPEYDIAKFKPT 753          
BLAST of Ggra8108.t1 vs. uniprot
Match: A0A7S1TDW4 (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TDW4_9RHOD)

HSP 1 Score: 63.2 bits (152), Expect = 1.370e-6
Identity = 30/82 (36.59%), Postives = 50/82 (60.98%), Query Frame = 0
Query:  633 GNAVFVTEDQLDQPKIARLNDKKVLPFERLTFKELRTYNRDQLRAYCFAYGM----ERRKKTEMEADMARYLSYWNRGKPEF 710
            G  V   E+ L + ++ +L  + + P +RLTF ++R YNRD LR Y + YG+     R+K+  M A+MAR L+ ++ G P++
Sbjct:   34 GGVVLPRENDLSKEQLQKLRKRNLKPIDRLTFSDIRAYNRDDLRQYSYVYGLGKDYPRKKRKMMAAEMARALTSFHPGDPKY 115          
The following BLAST results are available for this feature:
BLAST of Ggra8108.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3J1V41.270e-22546.40Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QSD55.300e-7437.76Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
M2XRR64.880e-2029.39Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
R7QFX01.610e-1341.84Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3J3321.280e-1142.42Beta-glucuronosyltransferase GlcAT14B n=1 Tax=Grac... [more]
A0A7S1TDW41.370e-636.59Hypothetical protein (Fragment) n=1 Tax=Compsopogo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 942..976
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 417..446
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 779..815
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 508..522
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 381..395
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 218..235
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 281..295
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..626
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 754..816
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 131..151
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 316..368
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 532..547
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 554..605
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 237..277
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 754..769
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 170..188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000869_piloncontigtig00000869_pilon:27795..30902 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8108.t1Ggra8108.t1Gracilaria gracilis GNS1m malemRNAtig00000869_pilon 27795..30902 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8108.t1 ID=Ggra8108.t1|Name=Ggra8108.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1036bp
MANGPRPGAASKDQEDSAAEHMEGITAPPASPADTNPSIANRTADKETDR
LGLNDSTTMKPREITSPAGHDLPPRHAQSVSPKVGHPEKAATLPLVSIEA
QSGSVDKLAVDEPDLDKTTSAEDKPLDASPQNPMMKQNSDFSEQTADAAE
VSISAQKLPSDERKATIPSEGTHTKQAPDGTNPPSHPSVAQREPEESAPK
GNPPSLPSAKQEPDAESNAAHGLSSSDNPVSSPTELKILKNDEKPSEEQP
ETGEEDKPLLLPKLSDDEVEPGKAESTADCGKHLGSTSPQHFSKGQTEDH
LLMDSEPGKVSGTNQEESVIKEEEREMQKTESIVDHPPGSRTADRAEDLS
TGGREGHESEDVVGGKKAHEVGIAESSSDQAKQDESAKKESISEGKPRGL
TPVSSAANEYGAKDQGLSKGANSSDGNDDIPTGVGNERSNSKPNTKPVVE
RIEPLKETPATEQGAAPMDIDSAGQQLEAIPSNEKMGDEKDSEDINIIAG
KGPIDVSKIDNKTSEDVEMTENTPSKTDAGLEKQGQAEDDNTAQIKKSRK
NVHKATQSQLLRARSNSRGGAPDSSFDSGGRQDSVTQEAGKAPAQKSSDT
ASQASKGKEAEGAPEDDGPRPVMEAKGLAMRVGNAVFVTEDQLDQPKIAR
LNDKKVLPFERLTFKELRTYNRDQLRAYCFAYGMERRKKTEMEADMARYL
SYWNRGKPEFALHEYIPTSGRIIDRDEFFGTRGSQANQSAASLGGSSYSG
VDVNRRFGSRMQSSSGGYGDKGSGPGVHGSVTGNLQTSPSTLSLGNANRN
ARAGSTPTSLPRGFGTSFKQRVHARQASAKFKAAYNGAGDTIVNVVENAA
AYFEGKDSPEVIADQTKSFARYQFNVDLLTEIFDGPIQEDVEVLKVSTVK
ANGNMEGTVAQNERGNNPTTSSTQTKTNVMFDIAKRLLSNKRSSHQAELD
SFETNLKRAEEKAKHTERRNMRLFQRLERAETVAQVEAIKKEFETEFGTP
VDFTSRPVVRRKIDKSLPPLVIPDDQSRILRFTFL*
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