Ggra8103.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8103.t1
Unique NameGgra8103.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length177
Homology
[Close]
BLAST of Ggra8103.t1 vs. uniprot
Match: A0A2V3J242 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J242_9FLOR)

HSP 1 Score: 127 bits (320), Expect = 2.680e-34
Identity = 70/137 (51.09%), Postives = 91/137 (66.42%), Query Frame = 0 
Query:   34 TAQDLIQDTEIQALLKDSSLSTEDRIPDDAIKMAILKHYTQKYRIPVASNAFQGMETTEDIANWYSYQLRPMKNPSHGHKILLNTVGKQVNNDHLDDDAY--RQTQRKDEILSELPTNLRLDEKAFRIPQFSLKQKR 168
            +A DLIQ++ +QALL  SSLS+   I D  +KM ILKHY  KYRIPVAS+AF  M + +DIA WYS QL P    SHG  I+LN + K    +++ +D       +++ E+L  LP NLRLDE+AFR PQFSLK K+
Sbjct:   28 SAHDLIQESHVQALLSKSSLSSSQEILDATVKMDILKHYALKYRIPVASSAFSTMRSAQDIAEWYSTQLHPRGPQSHGDHIVLNMI-KSGEKENMPEDQIDLASAKQRAEVLESLPQNLRLDERAFRRPQFSLKGKK 163
The following BLAST results are available for this feature:
BLAST of Ggra8103.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J2422.680e-3451.09Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000869_piloncontigtig00000869_pilon:19781..20311 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8103.t1Ggra8103.t1Gracilaria gracilis GNS1m malemRNAtig00000869_pilon 19781..20311 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8103.t1 ID=Ggra8103.t1|Name=Ggra8103.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=177bp
MMSICNSLGRRIVDKVQPNIVSAIAITYRAAHSTAQDLIQDTEIQALLKD
SSLSTEDRIPDDAIKMAILKHYTQKYRIPVASNAFQGMETTEDIANWYSY
QLRPMKNPSHGHKILLNTVGKQVNNDHLDDDAYRQTQRKDEILSELPTNL
RLDEKAFRIPQFSLKQKRVAKRRPNS*
back to top