Ggra8093.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8093.t1
Unique NameGgra8093.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length192
Homology
BLAST of Ggra8093.t1 vs. uniprot
Match: A0A2V3II04 (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II04_9FLOR)

HSP 1 Score: 94.0 bits (232), Expect = 4.400e-19
Identity = 49/111 (44.14%), Postives = 65/111 (58.56%), Query Frame = 0
Query:   80 AEAIVNVLEGTYENLLYSGNQKNDWHYVQITAKPNSEDELTWSNRAGVQWTLKLKESSGGYERGSFIVEADSPYHSSGHTSGVINWSEPGDFDIGNYVLGVTGPWKELYTR 190
            +E + +V+ G+YENLLYSG+ KN+WH+VQI    NS   L W+N AGV+WTL ++   G  +  + +V ADSPYHS GHT   I             V  + GP  E YTR
Sbjct:  251 SEVVASVV-GSYENLLYSGSGKNNWHFVQIEKVNNST--LRWTNSAGVKWTLYVRSVGGKVDTENLVVGADSPYHSRGHTIAKIERDSKSGM-----VTAIRGPGNEAYTR 353          
BLAST of Ggra8093.t1 vs. uniprot
Match: A0A7S2ELF5 (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ELF5_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 2.840e-8
Identity = 25/51 (49.02%), Postives = 35/51 (68.63%), Query Frame = 0
Query:   85 NVLEGTYENLLYSGNQKNDWHYVQITAKPNSEDELTWSNRAGVQWTLKLKE 135
            N L G YEN LY G  KNDWHY ++T K ++ +E+ W+NRA V W+L + +
Sbjct:   53 NGLLGKYENHLYDGGGKNDWHYAELT-KGDAPNEIIWTNRANVSWSLFMTD 102          
BLAST of Ggra8093.t1 vs. uniprot
Match: A0A7M6DQD5 (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M6DQD5_9CNID)

HSP 1 Score: 57.0 bits (136), Expect = 1.220e-6
Identity = 35/108 (32.41%), Postives = 50/108 (46.30%), Query Frame = 0
Query:   86 VLEGTYENLLYSGNQKNDWHYVQITAKPNSEDELTWSNRAGVQWTLKLKESSGGYERGSFI---VEADSPYHSSGHTSGVINWSEPGDFDIGNYVLGVTGPWKELYTR 190
            +L G +EN  Y    KNDWHYV I    +++ + TWSNRAGV+W++        Y+   F    V  DS Y+  G+     N              G+ GP+ E Y +
Sbjct:  120 LLCGDFENHKYDVKGKNDWHYVHIDYDESTQ-KYTWSNRAGVKWSM--------YQTNVFNKLRVGEDSTYYEGGYKEATFNDK------------GIVGPFGEFYDK 206          
The following BLAST results are available for this feature:
BLAST of Ggra8093.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3II044.400e-1944.14Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]
A0A7S2ELF52.840e-849.02Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7M6DQD51.220e-632.41Uncharacterized protein n=1 Tax=Clytia hemisphaeri... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM01411GCC2_GCC3_2coord: 15..60
e-value: 6.0E-7
score: 39.1
NoneNo IPR availableGENE3D2.10.50.10Tumor Necrosis Factor Receptor, subunit A, domain 2coord: 12..74
e-value: 3.0E-9
score: 38.8
IPR011641Tyrosine-protein kinase ephrin type A/B receptor-likePFAMPF07699Ephrin_rec_likecoord: 17..60
e-value: 1.8E-5
score: 24.4
IPR009030Growth factor receptor cysteine-rich domain superfamilySUPERFAMILY57184Growth factor receptor domaincoord: 11..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000867_piloncontigtig00000867_pilon:755499..756074 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8093.t1Ggra8093.t1Gracilaria gracilis GNS1m malemRNAtig00000867_pilon 755499..756074 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8093.t1 ID=Ggra8093.t1|Name=Ggra8093.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=192bp
MPTVILAVVTPCSPGYGNGPNGCQPCQPGTFQPAANLEACLQCPEPYATP
RIGATQCDYCWANNTVPNKPQTLCIALNSAEAIVNVLEGTYENLLYSGNQ
KNDWHYVQITAKPNSEDELTWSNRAGVQWTLKLKESSGGYERGSFIVEAD
SPYHSSGHTSGVINWSEPGDFDIGNYVLGVTGPWKELYTRV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011641Tyr-kin_ephrin_A/B_rcpt-like
IPR009030Growth_fac_rcpt_cys_sf