Ggra8091.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra8091.t1
Unique Name	Ggra8091.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	421

Homology

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BLAST of Ggra8091.t1 vs. uniprot
Match: A0A2V3IYC4 (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYC4_9FLOR)

HSP 1 Score: 358 bits (919), Expect = 1.820e-117
Identity = 194/423 (45.86%), Postives = 270/423 (63.83%), Query Frame = 0

Query:    1 MSGTSLPVRFEVGNMLIWVWLEVLALGALILWTTNAAHIIMAFNLKQANVIRLSKKRKAIDWFPMNADIRELPVSSKVVLTLIRITVTVAVAVSALGIEPGEQFINWQPSTDFVVANDANFSGRSFNSREPDLLQDFAVSACEDVNTISLVKHKAFISQQSFSCNDGSLFGTKTVLVEVIWHKDTVREIAHGEKLPVNIELGDTSDVTENRSNATDVEISSSDGAPIFMFVTRRRLTNQTFGDC--------PGEREYLLVGNSPSAD---ISNHNVAVSYVICEPGSTVFLRNTDRMIFLSDLGANQQMILARQVAESLVSIVGDESGRVYEGDRRKVTILEAGYDVFVLALAVGNTLLMFMSAVLKKAVTSDLDVDVFSSFSMYRLGSSFCNGENRLSASIDGDIVLKGKYEGDVLKVTPL 412
            M  T+L + F++GNM++W+WLEVLALG L+LWTTN A IIM    KQ+  +RL  K+  ID  P+N D+  LP + K+++T IR  V++AVA SALGI+PG  + N QPST  V A + NFSGR+++S   D LQDFAV ACEDV T S+VK  A +S  +FSCN G     K  + EVIW +DTVR+IA G+ LPVNI+LG+ S V E  S+   + + +S  AP+FM V RR + N T+G+C         G+REYL+  N    D   + +  V+V+YVIC+  S + LRNTDRM+FL  +  +QQMILARQVAE+LVSI  D S +V+ G  R VT LE G+   +L L +GNTL + +SA+L + V  D+ VDV S  SMY LG S    + + +     D+ ++  +  + +++  +
Sbjct:    1 MEDTTLYMSFKLGNMVVWLWLEVLALGCLVLWTTNLASIIMVLFFKQSRTLRLRAKKTLIDRIPLNGDLTTLPTAPKLIITFIRAGVSIAVAFSALGIDPGNYYTNSQPSTHLVSATNLNFSGRAYDSAPTDSLQDFAVVACEDVTTTSVVKFMAIVSNSAFSCNFGRDVSDKKAIAEVIWDQDTVRDIAKGQALPVNIKLGENSAVLEEESSERLIRLHNSKEAPVFMSVIRRGVQNSTYGECHDDSNDDTTGQREYLVFSNGRVEDAGRVEDEVVSVAYVICKASSVIPLRNTDRMMFLPHITGSQQMILARQVAEALVSITADSSKKVFFGQTRSVTKLEEGFFKLMLGLTIGNTLFLVVSAILLRYVKRDIHVDVLSPVSMYWLGRSSEQRDKQGNKEATEDVFIRAAHTANGIEIAEI 423

The following BLAST results are available for this feature:

BLAST of Ggra8091.t1 vs. uniprot

BLAST of Ggra8091.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IYC4	1.820e-117	45.86	Uncharacterized protein n=2 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 15..45
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 46..334
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 357..420
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 335..356
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..14
None	No IPR available	TMHMM	TMhelix		coord: 15..37
None	No IPR available	TMHMM	TMhelix		coord: 334..356

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000867_pilon	contig	tig00000867_pilon:748929..750191 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra8091.t1	Ggra8091.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000867_pilon 748929..750191 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra8091.t1 ID=Ggra8091.t1|Name=Ggra8091.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=421bp
MSGTSLPVRFEVGNMLIWVWLEVLALGALILWTTNAAHIIMAFNLKQANV
IRLSKKRKAIDWFPMNADIRELPVSSKVVLTLIRITVTVAVAVSALGIEP
GEQFINWQPSTDFVVANDANFSGRSFNSREPDLLQDFAVSACEDVNTISL
VKHKAFISQQSFSCNDGSLFGTKTVLVEVIWHKDTVREIAHGEKLPVNIE
LGDTSDVTENRSNATDVEISSSDGAPIFMFVTRRRLTNQTFGDCPGEREY
LLVGNSPSADISNHNVAVSYVICEPGSTVFLRNTDRMIFLSDLGANQQMI
LARQVAESLVSIVGDESGRVYEGDRRKVTILEAGYDVFVLALAVGNTLLM
FMSAVLKKAVTSDLDVDVFSSFSMYRLGSSFCNGENRLSASIDGDIVLKG
KYEGDVLKVTPLGAGEMLER*