Ggra8088.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8088.t1
Unique NameGgra8088.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length336
Homology
BLAST of Ggra8088.t1 vs. uniprot
Match: A0A2V3IL69 (Beta-porphyranase A n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL69_9FLOR)

HSP 1 Score: 202 bits (514), Expect = 4.380e-59
Identity = 120/320 (37.50%), Postives = 168/320 (52.50%), Query Frame = 0
Query:    6 FPP-------NW-RDVGNLPSRISL-PTLQINPNDPNGHSDPPPNYILNEAPSGKKWRKNYDFSSEFNRESNTEIVPMRQLQRWTTRNHWQGRFPAVFDMNNVLYNGRSMVLQVREHDAPTDGFLRVFERGNRAAINSRMSNEQKFYTGSFVRSVDTITYGYFETVVKLGDSTLSSAFWLKEIGGREREIDAFEYSTGLIRNRG--TPLSHQYLMNVHSFEKNGNRRTDHENSKWVISDRDLSREKFIKVGLLWTKEKVCWYLNDELVRNLNHGGEFRNAQMRVQFDREYFRWIEDPSAD----DNYGDFEVMYIRTWQL 310
            FPP        W  DVGN  + + L P    N  DPN  +  PP  + ++  SG ++ +N   S E N  SN + V   QL+ WTT N W GRFPA+F   N + +   +V  V   D+     +R  E  +       + + +  Y  +F RS   + YGY E   KLGDS+LSSAFWLKE  G EREID FE+ST   ++ G   P S+ Y MN+H F  +G    D    + +    +LS+++ IK+G LWT   + WY+ND  +R + H GEF +  M +Q DREY  W   P+ +    D +GDF V Y+RTW +
Sbjct:   12 FPPVSLQNGEPWVEDVGNESNEMQLGPLPNYNSEDPNAENYLPPQIVRDQLASGYEFERNDSLSIELN-VSNDQTVDSNQLRNWTTENAWTGRFPAIFFAKNSIVSNNCLVQVVNIADSSDRETIRQ-ECSDDEDAQKWIEDGKDVYDTTFFRSEQQMMYGYVEIACKLGDSSLSSAFWLKEHRGLEREIDVFEFSTSK-KDSGYSAPFSNMYNMNIHKFTTDG----DFSAQRSINMCTNLSQQELIKIGFLWTTTHLHWYINDVEIRKVQHNGEFCDLGMNIQLDREYLSWFGLPNDEQGGTDTFGDFVVHYVRTWNI 324          
BLAST of Ggra8088.t1 vs. uniprot
Match: A0A2V3IBA7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBA7_9FLOR)

HSP 1 Score: 102 bits (255), Expect = 2.910e-22
Identity = 67/184 (36.41%), Postives = 91/184 (49.46%), Query Frame = 0
Query:    6 FPP-------NW-RDVGNLPSRISL-PTLQINPNDPNGHSDPPPNYILNEAPSGKKWRKNYDFSSEFNRESNTEIVPMRQLQRWTTRNHWQGRFPAVFDMNNVLYNGRSMVLQVREHDAPTDGFLRVFERGNRAAINSRMSNEQKFYTGSFVRSVDTITYGYFETVVKLGDSTLSSAFWLKEIG 180
            FPP        W  DVGN  + + L P    N  DPN  +  PP  + ++  SG ++ +N   S E N  SN + V   QL+ WTT N W GRFPA+F   N + +   +V  V   D+     +R  E  +       + + +  Y  +F RS   + YGY E   KLGDS+LSSAFWLKE G
Sbjct:   12 FPPVSLQNGEPWVEDVGNESNEMQLGPLPNYNSEDPNAENYLPPQIVRDQLASGYEFERNDSLSIELN-VSNDQTVDSNQLRNWTTENAWTGRFPAIFFAKNSIVSNNCLVQVVNIADSSDRETIRQ-ECSDDEDAQKWIEDGKDVYDTTFFRSEQQMMYGYVEIACKLGDSSLSSAFWLKEHG 193          
BLAST of Ggra8088.t1 vs. uniprot
Match: A0A3D9L024 (Glycosyl hydrolase family 16 n=1 Tax=Marinoscillum furvescens DSM 4134 TaxID=1122208 RepID=A0A3D9L024_9BACT)

HSP 1 Score: 78.2 bits (191), Expect = 7.760e-13
Identity = 69/276 (25.00%), Postives = 117/276 (42.39%), Query Frame = 0
Query:   42 YILNEAPSGKKWRKNYDFSSEFNRESNTEIVPMRQLQRWTTRNH-WQGRFPAVFDMNNVLYNGRSMVLQVREH--DAPTDGFLRVFERGNRAAINSRMSNEQKFYTGSFVRSVDTITYGYFETVVKLGDSTLSSAFWLKEIGGRE-REIDAFEYSTGLIRNRGTPLSHQYLMNVHSF---EKNGNRRTDHENSKWVISDRDLSREKFIKVGLLWTKEKVCWYLNDELVRNLNHGGEFRNAQMRVQFDREYFRWIEDPSADDNY--GDFEVMYIRTW 308
            + L++  +  KW+   D S EF+ ++          +RW   N  W+GR P  F  +NV      + ++V +H  D   +G+                      ++  F++S +T+ YGYFE   KL ++   S FW+ ++G     EID  E + GL  NR     H    N+H F   E  GN +     +K      +L  +  +  GL W ++ + +YL+  L R   +     +  + +  + E  +W      DDN   G ++V Y R W
Sbjct:   45 FPLSDQRNTGKWKLRKDLSDEFDSKT-------LNTRRWHPNNPGWKGRKPTYFHGSNVSLQDGELQIRVNQHEKDILPEGYT---------------------HSTGFIKSKETVLYGYFEVEAKLMNAPWVSGFWMCKVGKEWWTEIDICENAPGLAYNR-----HDLNSNIHVFRAPEDKGNVKEHFSRNKKYYVPFELQADYHVW-GLEWNEDVIRFYLDGVLFREAEN--THWHQPLEINLNCESNKWF-GALPDDNRLDGVYKVKYFRAW 283          
BLAST of Ggra8088.t1 vs. uniprot
Match: A0A382HJC0 (GH16 domain-containing protein n=3 Tax=root TaxID=1 RepID=A0A382HJC0_9ZZZZ)

HSP 1 Score: 74.3 bits (181), Expect = 2.460e-11
Identity = 78/311 (25.08%), Postives = 116/311 (37.30%), Query Frame = 0
Query:   25 LQINPNDPNGHSDPPPNYILNEAPSGKKWRKNYDFSSEFNRE-------------SNTEIVPMRQLQRWTTRNHWQGRFPAVFDMNNVLYNGRSMVLQVREHDAPTDGFLRVFERGNRAAINSRMSNEQKFYTGSFVRSVDTITYGYFETVVKLGDSTLSSAFWLKEIGGREREIDAFEY--STGL-IRNRGTPLSHQYLMNVHSFEKNGNRRTDHENS---KWVISDRDLSREKFIKVGLLWTKEKVCWYLNDELVRNLN--HGGEFRNAQ-MRVQFDREYFRWIEDPSADDNYGDFEVMYIRTWQLDKS 313
            L IN N     SD  P     E   G  W    D S EFN               +N  I P        +   W GR P  FD  +       + L ++ +  P        +      I+     +   YT S + S     YGYFE   +  +  +SSAFWL    G   E+D FE    TG  I   G    +     +H++++       +  S    W +S      E F   G   + E + +Y +   V ++N    G+  N   M +  D E F W   P  ++   +F++ YIR+WQL K+
Sbjct:   29 LSINRNSAFQSSDVLP---FGEVSIGNSWLFRSDLSDEFNENEINIDKWFIAGDVNNEVIYPEESGLEDGSAADWVGRAPGAFDKKSPFIENGILNLPIKWN--PNSDLFPYLDENREELIDEDCMCKYGKYTTSGLISKSNAQYGYFEIKARAANIPISSAFWLI---GNHFEVDIFELIGKTGNGIDGSGPEAPYTMPATIHNWDEGDLEDNGYGKSFSLNWNVS------EDFHIYGAEISSEYINFYADGSKVGSINKKESGKIWNTDFMHIWVDTEIFSWEGFPKKNELPANFQIDYIRSWQLIKN 325          
The following BLAST results are available for this feature:
BLAST of Ggra8088.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IL694.380e-5937.50Beta-porphyranase A n=2 Tax=Gracilariopsis chorda ... [more]
A0A2V3IBA72.910e-2236.41Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A3D9L0247.760e-1325.00Glycosyl hydrolase family 16 n=1 Tax=Marinoscillum... [more]
A0A382HJC02.460e-1125.08GH16 domain-containing protein n=3 Tax=root TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.200coord: 41..310
e-value: 1.8E-37
score: 131.5
IPR000757Glycoside hydrolase family 16PFAMPF00722Glyco_hydro_16coord: 95..270
e-value: 2.5E-10
score: 40.1
IPR000757Glycoside hydrolase family 16PROSITEPS51762GH16_2coord: 23..313
score: 13.865392
IPR013320Concanavalin A-like lectin/glucanase domain superfamilySUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 50..310

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000867_piloncontigtig00000867_pilon:739343..740439 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8088.t1Ggra8088.t1Gracilaria gracilis GNS1m malemRNAtig00000867_pilon 739343..740439 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8088.t1 ID=Ggra8088.t1|Name=Ggra8088.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=336bp
MSERRFPPNWRDVGNLPSRISLPTLQINPNDPNGHSDPPPNYILNEAPSG
KKWRKNYDFSSEFNRESNTEIVPMRQLQRWTTRNHWQGRFPAVFDMNNVL
YNGRSMVLQVREHDAPTDGFLRVFERGNRAAINSRMSNEQKFYTGSFVRS
VDTITYGYFETVVKLGDSTLSSAFWLKEIGGREREIDAFEYSTGLIRNRG
TPLSHQYLMNVHSFEKNGNRRTDHENSKWVISDRDLSREKFIKVGLLWTK
EKVCWYLNDELVRNLNHGGEFRNAQMRVQFDREYFRWIEDPSADDNYGDF
EVMYIRTWQLDKSPMERIGESMRRMGSRMMNRGRF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000757GH16
IPR013320ConA-like_dom_sf