Ggra8084.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8084.t1
Unique NameGgra8084.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length269
Homology
BLAST of Ggra8084.t1 vs. uniprot
Match: A0A8J8P597 (Uncharacterized protein n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8P597_HALGN)

HSP 1 Score: 108 bits (270), Expect = 9.300e-24
Identity = 67/174 (38.51%), Postives = 93/174 (53.45%), Query Frame = 0
Query:   84 TEVICDFCQHPSISHAPFSKLCLGAFQSQPLESLLSNLMEKGLEEAVNYRCPKCETVSCSKVKRYFSKIPNLLMVKLNRFCGPAKRE--GFIEYPPVLDLSKYVKENADVE--LYELVAVLTHHGSSISSGRYTADVKSFVGKWNRTEDEKTSAILESMALSNNAYILFYQKVS 253
            T VIC  C   SI+  PF  L + AF+S   + L   L E  L+    YRC KC+    +K+K   SK+PN+L+  L RF  P+ ++  G +++    DL KY K   D +  LYEL  +  H GS ++SG Y A  K   GKW    DE    + ES  L+  AY+LFY+KV+
Sbjct:  213 TIVICGKCNEKSITFNPFMTLSV-AFESTLEKCLAGFLKEDSLDGRDQYRCDKCKKQGKAKIKTELSKLPNILVFHLKRFQFPSMKKITGRVQFKTYFDLEKYCKSPLDAKDTLYELFGLTVHIGS-LTSGHYIAYTKRTGGKWYMFNDESYELVKESDVLNQEAYLLFYRKVT 384          
BLAST of Ggra8084.t1 vs. uniprot
Match: J9IVB8 (Ubiquitin carboxyl-terminal hydrolase family protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9IVB8_9SPIT)

HSP 1 Score: 105 bits (262), Expect = 5.410e-22
Identity = 77/241 (31.95%), Postives = 122/241 (50.62%), Query Frame = 0
Query:   24 FSPQHCHDADLFIDTLFESIDRARNSGCVDRKLLLECENVGEDWAMSIRNRSYSRF------GNITTEVICDFCQHPSISHAPFSKLCLGAFQSQPLESLLSNLMEKGLEEAVNYRCPKCETVSCSKVKRYFSKIPNLLMVKLNRFCGPA--KREGFIEYPPVLDLSKYVKENA-DVE--LYELVAVLTHHGSSISSGRYTADVKSFVGKWNRTEDEKTSAILESMALSNNAYILFYQKVS 253
            FSP   HD   F   +  ++        +  K   + +N+  + + ++ ++S+         G   T V C  C+  SI++ PF  L + AF+S   + +++ L E  L+    YRC KC   S +K+K   SK+PN+L+  L RF  P+  K +G I+Y   LD++KY K +  D+E   YEL A+  H G+ +  G Y A  K    KW    DE    + E+ ALS  AY+LFY+K++
Sbjct:  528 FSPVFQHDCHEFFTYIMSNLQDEETP--IQEKQNTDSDNLSAESSWNLFDQSHPSIIDKLFSGMQKTIVTCVKCERKSITYNPFMTLSM-AFESSLDKCIVNYLKEDTLDSKDQYRCEKCNQCSKAKIKTEISKLPNVLVFHLKRFAFPSMKKIKGKIKYSNKLDMAKYCKNSKLDIEDTEYELFALTVHLGT-LEQGHYVAYTKRN-SKWILFNDEDFQYVKEADALSQEAYLLFYRKLT 763          
BLAST of Ggra8084.t1 vs. uniprot
Match: A0A078B4F5 (Ubiquitin carboxyl-terminal hydrolase family protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078B4F5_STYLE)

HSP 1 Score: 98.6 bits (244), Expect = 1.250e-19
Identity = 73/241 (30.29%), Postives = 118/241 (48.96%), Query Frame = 0
Query:   24 FSPQHCHDADLFIDTLFESIDRARNSGCVDRKLLLECENVGEDWAMSIRNRSYSRF------GNITTEVICDFCQHPSISHAPFSKLCLGAFQSQPLESLLSNLMEKGLEEAVNYRCPKCETVSCSKVKRYFSKIPNLLMVKLNRFCGPA--KREGFIEYPPVLDLSKYVKENA-DVE--LYELVAVLTHHGSSISSGRYTADVKSFVGKWNRTEDEKTSAILESMALSNNAYILFYQKVS 253
            FSP   HD   F   +  ++        +  K   + +N+  + + +   +S+         G   T V C  C   S+++ PF  L L A++S   + + + L E  L+    Y+C KC   S +K+K   SK+PN+L+  L RF  P+  K +G ++Y   +D+ KY K +  DVE   YEL A+  H G+ +  G Y A  K    KW    DE+   + E+ AL+  AY+LFY+K++
Sbjct:  478 FSPVFQHDCHEFFTHIMSNLQDEETP--IQEKQYTDSDNMSAEASWNNFEQSHPSIIDKLFSGLQKTIVTCVKCNRKSVTYNPFMTLSL-AYESSIDKCIANYLREDTLDTKDQYKCEKCNQSSKAKIKTEISKLPNILVFHLKRFAFPSMKKIKGKVKYGSYIDMQKYCKNSKLDVEDTQYELFALTVHVGT-LEQGHYVAFTKRNQ-KWILFNDEEYQQVKETDALNQEAYLLFYRKLT 713          
BLAST of Ggra8084.t1 vs. uniprot
Match: A0A8J2K7W6 (Hypothetical protein n=1 Tax=Allacma fusca TaxID=39272 RepID=A0A8J2K7W6_9HEXA)

HSP 1 Score: 89.4 bits (220), Expect = 1.570e-16
Identity = 66/188 (35.11%), Postives = 93/188 (49.47%), Query Frame = 0
Query:   80 GNITTEVICDFCQHPSISHAPFSKLCLGAFQSQP-LESLLSNLMEKGLEEAVN---YRCPKCETVSCSKVKRYFSKIPNLLMVKLNRFCGP----AKREGFIEYPPV-LDLSKYV-------KENAD--VELYELVAVLTHHGSSISSGRYTADVKSFVGKWNRTEDEKTSAILESMALSNNAYILFY 249
            G +  EV C  C   S  H PF  L L   + +P L+  L+  ++  +EE V+   Y C  C+T   S  + + +K+PN+L + L RF       +K + F+E+P V LD+S Y+       K+NA     LY+L AV+ HHGS + SG YTA  K     W    D       ES+     AYILFY
Sbjct:  357 GVLQNEVRCCRCGTESKKHDPFLDLSLDIAEGEPKLQDCLTRFVD--VEELVDNDMYFCGHCKTRQKSTKRFWITKLPNVLCLHLKRFRWSNYLRSKLDHFVEFPLVNLDMSHYMLSGSNGRKQNAPNGTNLYDLAAVIVHHGSGVGSGHYTAFAKKD-SDWFNFNDSSVKLTQESIVAKAKAYILFY 541          
BLAST of Ggra8084.t1 vs. uniprot
Match: A0A8H7SHC3 (USP domain-containing protein n=1 Tax=Thamnidium elegans TaxID=101142 RepID=A0A8H7SHC3_9FUNG)

HSP 1 Score: 86.3 bits (212), Expect = 1.690e-15
Identity = 59/181 (32.60%), Postives = 87/181 (48.07%), Query Frame = 0
Query:   80 GNITTEVICDFCQHPSISHAPFSKLCLGAFQSQPLESLLSNLMEKGLEEAVNYRCPKCETVSCSKVKRYFSKIPNLLMVKLNRFCGPAKREGF-------IEYPPVLDLSKYVKENADVE--LYELVAVLTHHGSSISSGRYTADVKSFVGKWNRTEDEKTSAILESMALSNNAYILFYQK 251
            G + ++V C  C+  S +      L +    +  L     N +   ++E   Y+C KC+ +  +  +   +K P +L V L RF    +R G+       I+YP  LDLS+Y  +++ V    Y L AV+ H G    SG Y A VKS  GKW   +DE         ALS NAY+LFYQ+
Sbjct:  212 GKLRSQVKCRNCKAVSDNFEGCLDLSVDLNNANSLYKTFDNFIR--IDEVEGYKCDKCKKLVTASKQMTINKTPMMLTVHLKRFAFDLER-GYMRKINTTIKYPQKLDLSRYTSKDSKVTGTHYSLYAVVVHLGPGCDSGHYYAYVKSPEGKWYCMDDEDVQEASIDEALSQNAYMLFYQQ 389          
BLAST of Ggra8084.t1 vs. uniprot
Match: A0A7R8W7U2 (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Cyprideis torosa TaxID=163714 RepID=A0A7R8W7U2_9CRUS)

HSP 1 Score: 82.4 bits (202), Expect = 4.370e-14
Identity = 59/192 (30.73%), Postives = 88/192 (45.83%), Query Frame = 0
Query:   80 GNITTEVICDFCQHPSISHAPFSKLCLGAFQSQPLESLLSNLMEK---GLEEAVNYRCPKCETVSCSKVKRY-FSKIPNLLMVKLNRFCGPAKREGF-IEYPPVLDLSKYVK--ENADVELYELVAVLTHHGSSISSGRYTADVKSFVGKWNRTEDEKTSAILESMALSN-NAYILFYQKVSQVCNLSTSAS 263
            G + ++V C  C   S ++  F  L L       L+  L     K   GL+E   Y C  C+   C  VK++   + PN+L++   RF     + G  I +   LDL  YV   +N     Y L+  + HHGSS++SG YTA+V      W   +D + S I  S  + N +AYIL Y++        T A+
Sbjct:  283 GYMQSKVTCHGCNTHSNTYDHFQDLHLNVNGKHTLDEALRAYFRKEEIGLDECNKYSCDNCKR-KCRAVKQFCIERPPNVLLICFKRFNMLGNKIGHQIAFTSTLDLQPYVNRCQNGQRHDYRLIGTVNHHGSSVNSGHYTANVLVGEKDWYHFDDTRVSKINTSEVIHNLSAYILLYERFQSYVEKETFAT 473          
BLAST of Ggra8084.t1 vs. uniprot
Match: A0A6P6XYD7 (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Dermatophagoides pteronyssinus TaxID=6956 RepID=A0A6P6XYD7_DERPT)

HSP 1 Score: 81.3 bits (199), Expect = 8.230e-14
Identity = 64/209 (30.62%), Postives = 94/209 (44.98%), Query Frame = 0
Query:   69 MSIRNRSY---SRFGNIT-TEVICDFCQHPSISHAPFSKLCLGAFQSQPLES-------LLSNLMEKGLE-----EAVNYRCPKCETVSCSKVKRYFSKIPNLLMVKLNRF----CGPAKREGFIEYP-PVLDLSKYVKEN-------ADVELYELVAVLTHHGSSISSGRYTADVKSFVGKWNRTEDEKTSAILESMALSNNAYILFY 249
            +S  N+S    S FG I   EV C  C + S  H PF  L L   Q    +S       LL++ + K  E     E   Y CP C+    S  K +  ++PN+L + L RF    C  +K +  I +P   LD+S ++  N           LY+L A++ HHG+ + SG YT+   +    W+   D   +   E   + + AYILFY
Sbjct:  270 LSTNNKSTMVTSIFGGILQNEVRCLICGNESRKHDPFFDLSLDIPQPSTQDSNGSNSNYLLTDCLSKFTELEELGETELYNCPTCKKKQRSSKKFWIRRLPNVLCLHLKRFKWSDCFRSKLDVHIRFPIKDLDMSPFILSNIHGTRNSCGSSLYDLAAIIVHHGNGVGSGHYTS-YATHHDCWHHFNDSSVTICNEDTVMKSKAYILFY 477          
BLAST of Ggra8084.t1 vs. uniprot
Match: ubiquitin carboxyl-terminal hydrolase 3 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A6ACC (ubiquitin carboxyl-terminal hydrolase 3 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A6ACC)

HSP 1 Score: 80.5 bits (197), Expect = 1.510e-13
Identity = 58/193 (30.05%), Postives = 89/193 (46.11%), Query Frame = 0
Query:   80 GNITTEVICDFCQHPSISHAPFSKLCL----------GAFQSQP--LESLLSNLME-KGLEEAVNYRCPKCETVSCSKVKRYFSKIPNLLMVKLNRFCGPA----KREGFIEYPPV-LDLSKYVKENADVE---LYELVAVLTHHGSSISSGRYTADVKSFVGKWNRTEDEKTSAILESMALSNNAYILFYQK 251
            G + +EV C  C   S +  PF  L L          G  +  P  ++  +++  E + L E+  Y CP C     S  K +  ++PN+L ++L RF   +    K E ++++P   LD+S YV ++ D     LY+L AV+ HHGS +S+G YT       G W    D   +   E   L    YI FY +
Sbjct:  282 GILQSEVTCLTCMTESKTQDPFLDLSLEIPPAYQTRKGKSKENPCKIQDCMTHFAELENLAESELYMCPNCNLKQKSTKKFWIKRLPNVLCLQLKRFRFQSFLRTKLETYVQFPMRGLDMSPYVLQDKDARKPILYDLAAVVVHHGSGVSAGHYTT-FACHDGSWYNFNDSSVTRTDEDHVLKCKGYIFFYTR 473          
BLAST of Ggra8084.t1 vs. uniprot
Match: A0A7R9KDL2 (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Medioppia subpectinata TaxID=1979941 RepID=A0A7R9KDL2_9ACAR)

HSP 1 Score: 80.1 bits (196), Expect = 2.140e-13
Identity = 61/199 (30.65%), Postives = 85/199 (42.71%), Query Frame = 0
Query:   80 GNITTEVICDFCQHPSISHAPFSKLCLG---------------AFQSQPLESLLSNLME-KGLEEAVNYRCPKCETVSCSKVKRYFSKIPNLLMVKLNRFCGP----AKREGFIEYPPV-LDLSKYVKEN--------ADVELYELVAVLTHHGSSISSGRYTADVKSFVGKWNRTEDEKTSAILESMALSNNAYILFY 249
            G +  EV C  C+  S  H PF  L L                  QS  L   LS+  E + L E   Y CP C+    S  + +  ++PN+L + L RF        K + +IE+P   LD+S YV  N            LY+L AV+ HHG+  +SG YT+   +    W+   D   +   E     + AYILFY
Sbjct:  312 GVLQNEVTCLVCRTESKKHDPFLDLSLDIPQMCSNGKNGVTEETVQSCHLSDCLSSFTELEELAETELYNCPNCKLKQRSTKRFWIRRLPNVLCLHLKRFRWNNFFRTKLDNYIEFPVKGLDMSSYVLSNMHETRGNACGSTLYDLAAVIVHHGNGAASGHYTS-YATHEDSWHHFNDSSVTVCDEQTVSQSKAYILFY 509          
BLAST of Ggra8084.t1 vs. uniprot
Match: A0A812DT81 (USP3 n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812DT81_SEPPH)

HSP 1 Score: 78.6 bits (192), Expect = 3.110e-13
Identity = 64/198 (32.32%), Postives = 86/198 (43.43%), Query Frame = 0
Query:   80 GNITTEVICDFCQHPSISHAPFSKL--------CLGAFQSQPLES------LLSNLME-KGLEEAVNYRCPKCETVSCSKVKRYFSKIPNLLMVKLNRF----CGPAKREGFIEYP-PVLDLSKYVKEN--------ADVELYELVAVLTHHGSSISSGRYTADVKSFVGKWNRTEDEKTSAILESMALSNNAYILFY 249
            G +  EV C  C   S  H PF  L        C  A +S+  E        LS+  + + LEE+  Y C  C+    S  K +  ++PN+L + L RF       +K E F+E+P   LD+ KYV  N        +   LY+L AV+ HHGS   SG YT+      G W    D   +   E       AYILFY
Sbjct:  105 GLLQNEVNCLICNMESKKHDPFLDLSLDIPIQYCSKALKSKESEGRCKLTDCLSSFTDIEELEESELYMCSNCKKKQRSTKKFWIRRLPNVLCLHLKRFRWNSVFRSKIETFVEFPLRGLDMYKYVLNNLHETRGSFSGSNLYDLAAVIVHHGSGAGSGHYTS-YAIHKGVWYHFNDSTVTVCNEETVTQCKAYILFY 301          
The following BLAST results are available for this feature:
BLAST of Ggra8084.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J8P5979.300e-2438.51Uncharacterized protein n=1 Tax=Halteria grandinel... [more]
J9IVB85.410e-2231.95Ubiquitin carboxyl-terminal hydrolase family prote... [more]
A0A078B4F51.250e-1930.29Ubiquitin carboxyl-terminal hydrolase family prote... [more]
A0A8J2K7W61.570e-1635.11Hypothetical protein n=1 Tax=Allacma fusca TaxID=3... [more]
A0A8H7SHC31.690e-1532.60USP domain-containing protein n=1 Tax=Thamnidium e... [more]
A0A7R8W7U24.370e-1430.73Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Cypr... [more]
A0A6P6XYD78.230e-1430.62Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Derm... [more]
ubiquitin carboxyl-terminal hydrolase 3 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A6ACC1.510e-1330.05ubiquitin carboxyl-terminal hydrolase 3 n=1 Tax=Ex... [more]
A0A7R9KDL22.140e-1330.65Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Medi... [more]
A0A812DT813.110e-1332.32USP3 n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 80..249
e-value: 1.0E-19
score: 71.1
NoneNo IPR availableGENE3D3.90.70.10Cysteine proteinasescoord: 6..253
e-value: 3.7E-37
score: 130.3
NoneNo IPR availablePANTHERPTHR21646UBIQUITIN CARBOXYL-TERMINAL HYDROLASEcoord: 23..253
NoneNo IPR availableCDDcd02257Peptidase_C19coord: 23..250
e-value: 2.27753E-27
score: 104.487
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 1..252
score: 25.182737
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 16..251

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000867_piloncontigtig00000867_pilon:599574..600380 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8084.t1Ggra8084.t1Gracilaria gracilis GNS1m malemRNAtig00000867_pilon 599574..600380 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8084.t1 ID=Ggra8084.t1|Name=Ggra8084.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=269bp
MDRILHRKLTYQFSPQILEAFLCFSPQHCHDADLFIDTLFESIDRARNSG
CVDRKLLLECENVGEDWAMSIRNRSYSRFGNITTEVICDFCQHPSISHAP
FSKLCLGAFQSQPLESLLSNLMEKGLEEAVNYRCPKCETVSCSKVKRYFS
KIPNLLMVKLNRFCGPAKREGFIEYPPVLDLSKYVKENADVELYELVAVL
THHGSSISSGRYTADVKSFVGKWNRTEDEKTSAILESMALSNNAYILFYQ
KVSQVCNLSTSASDNQAY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR028889USP_dom
IPR038765Papain-like_cys_pep_sf