Ggra8071.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8071.t1
Unique NameGgra8071.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length133
Homology
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BLAST of Ggra8071.t1 vs. uniprot
Match: A0A2V3IVC1 (Transcription initiation factor TFIID subunit 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVC1_9FLOR)

HSP 1 Score: 194 bits (493), Expect = 6.650e-55
Identity = 100/132 (75.76%), Postives = 110/132 (83.33%), Query Frame = 0 
Query:    1 MESRLRTLSAAELSHVLTNHYGLNQRRIPGNVEERRALIREMVQKKQKINVQDLSDYSNVIRTVLKNHRDAGLARGAFIAATGTTMSSGAMLGIPLNIQRRALEDDHVEELPLEADDYFPENNGAKVYADAR 132
            MESRL TLSAAEL+ VL NHY LNQ++IP N+EERRALIREMVQ+KQK NVQDLSDYSNVIRTVLK HRD GLA+GA IAA GT MS G ML +PL +QRRALED  V+ELP EADDYFPE +G  VYA AR
Sbjct: 1006 MESRLMTLSAAELNSVLMNHYRLNQKKIPSNLEERRALIREMVQRKQKSNVQDLSDYSNVIRTVLKKHRDTGLAKGAAIAAVGTAMSRGTMLSLPLQVQRRALEDGEVDELPTEADDYFPEKDGPAVYAAAR 1137
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BLAST of Ggra8071.t1 vs. uniprot
Match: R7QJK0 (Bromo domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJK0_CHOCR)

HSP 1 Score: 119 bits (299), Expect = 9.030e-29
Identity = 62/129 (48.06%), Postives = 88/129 (68.22%), Query Frame = 0 
Query:    1 MESRLRTLSAAELSHVLTNHYGLNQRRIPGNVEERRALIREMVQKKQKINVQDLSDYSNVIRTVLKNHRDAGLARGAFIAATGTTMSSGAMLGIPLNIQRRALEDDHVEELPLEADDYFPENNGAKVYA 129
            MESRL +L+ AE+++VLTN + LN ++IP +VEERRA++REM Q+K K N  D+SDY+ +IR V+K HR AGL + A     G + ++G  L +PL+ QR+ALED  V ELP E  D+  + + A   A
Sbjct: 1075 MESRLMSLTGAEMNNVLTNQFRLNSKKIPADVEERRAMVREMAQRKGKGNSHDMSDYAKLIRNVMKKHRVAGLGKSAANVPQGMSTTTGIFLALPLDKQRQALEDGDVSELPTEDQDFAGDPDMAAALA 1203
The following BLAST results are available for this feature:
BLAST of Ggra8071.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IVC16.650e-5575.76Transcription initiation factor TFIID subunit 1 n=... [more]
R7QJK09.030e-2948.06Bromo domain-containing protein n=1 Tax=Chondrus c... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000867_piloncontigtig00000867_pilon:287095..287493 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8071.t1Ggra8071.t1Gracilaria gracilis GNS1m malemRNAtig00000867_pilon 287095..287493 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8071.t1 ID=Ggra8071.t1|Name=Ggra8071.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=133bp
MESRLRTLSAAELSHVLTNHYGLNQRRIPGNVEERRALIREMVQKKQKIN
VQDLSDYSNVIRTVLKNHRDAGLARGAFIAATGTTMSSGAMLGIPLNIQR
RALEDDHVEELPLEADDYFPENNGAKVYADAR*
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