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Homology
BLAST of Ggra8064.t2 vs. uniprot
Match: A0A2V3IUZ7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUZ7_9FLOR) HSP 1 Score: 246 bits (629), Expect = 5.030e-67 Identity = 120/242 (49.59%), Postives = 168/242 (69.42%), Query Frame = 0
Query: 476 PLQDALQSVLQASTLASQHYTTLINKQNCSRSLPEWNAAHNLLVLAVTDGHIDPEHP-DGDLYFWRDQLYCTVSDLAISNRQDKLVVFNCLRRAQQLNLIDSADAYIQGIHLRQSMNSELFVLRKACVTLFERLVSLESNLDELRASFDAYRQQRLYCNVIAIALKLIPIAGGVVSNIVEVAADLCGELSGADVIEYSLSTACAILEQHNFSKLPQSKQAQIVNVFEEFGFTTEQVRSLFQN 716
PLQ AL+SVL + +H LINK+NC SL EWNAAH LLVLAV DG +DP +G +YFWRDQLYCTV D + + +DK +F CLR A L LIDS DAYIQGIH+ QS+ E+FVL++AC+ L R++SLE++++ LR + YR+++LY N++ IAL+LIP+AGG ++ + A++ G+L+ DV EY+L +A IL NF+ LP+S+Q ++ +FEEFG+T + L N
Sbjct: 365 PLQKALESVLSGISSPLEHCAGLINKKNCQHSLEEWNAAHQLLVLAVKDGALDPSADVEGQVYFWRDQLYCTVIDHQVLSVEDKNRLFRCLREAHDLRLIDSPDAYIQGIHVMQSVREEVFVLKRACLFLLMRVLSLETSIESLRTALKRYRKRQLYSNLVGIALQLIPVAGGAMAKAIMTGAEIVGDLNACDVAEYALESAVTILSDENFTTLPRSRQEELTGLFEEFGYTMNDIHLLLCN 606
BLAST of Ggra8064.t2 vs. uniprot
Match: A0A2V3J4V3 (Transcription initiation factor TFIID subunit 5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4V3_9FLOR) HSP 1 Score: 173 bits (438), Expect = 1.090e-40 Identity = 95/255 (37.25%), Postives = 150/255 (58.82%), Query Frame = 0
Query: 474 LTPLQDALQSVLQASTLASQHYTTLINKQNCSRSLPEWNAAHNLLVLAVTDGHIDPE-HPDGDLYFWRDQLYCTVSDLAISNRQDKLVVFNCLRRAQQLNLIDSADAYIQGIHLRQSMNSELFVLRKACVTLFERLVSLESNLDELRASFDAYRQQRLYCNVIAIALKLIPIAGGVVSNIVEVAADLCGELSGADVIEYSLS--------TACAILEQHNFSKLPQSKQAQIVNVFEEFGFTTEQVRSLF-QNCE 718
L PLQ L +V+Q S A LI+++ C SL EW AAH LLV+AVT+G + H LY+W +QLY TV+ +R D+ V CL+ + L+++ S DA + G+ + S+ +++ L++AC+ + ER++ +E L++LR +F AYR+ + Y VI IAL+LIPIAGG V+ ++ AD+ LS D+++Y+ A +L + L ++ ++ +F EFGFTTE+VR L + CE
Sbjct: 361 LPPLQAGLLAVMQGSLSAGDQCAALISRERCEVSLSEWYAAHQLLVMAVTEGTVRRSPHFHIKLYWWMEQLYATVAMFTDLSRADRDDVKTCLKNSHSLHVLQSPDAVVLGVEMMNSVRNDVSALKRACIMILERVLVVEGRLEDLRGAFVAYRRCQQYAKVIGIALQLIPIAGGAVAGVLSAGADIVSGLSVKDLVDYAFQGGGPLVTEVASRLLTPQALAALDPERRYELERLFHEFGFTTEEVRKLLLEACE 615
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 984..1004 |
| None | No IPR available | COILS | Coil | Coil | coord: 608..628 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 782..796 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 731..812 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 731..781 |
| None | No IPR available | PANTHER | PTHR24180 | CYCLIN-DEPENDENT KINASE INHIBITOR 2C-RELATED | coord: 66..184
coord: 131..251
coord: 10..126
coord: 299..443
coord: 99..218
coord: 204..317
coord: 232..349 |
| None | No IPR available | PROSITE | PS50297 | ANK_REP_REGION | coord: 266..294
score: 12.116116 |
| None | No IPR available | PROSITE | PS50297 | ANK_REP_REGION | coord: 35..67
score: 11.532425 |
| None | No IPR available | PROSITE | PS50297 | ANK_REP_REGION | coord: 299..327
score: 12.275303 |
| None | No IPR available | PROSITE | PS50297 | ANK_REP_REGION | coord: 398..424
score: 10.073198 |
| None | No IPR available | PROSITE | PS50297 | ANK_REP_REGION | coord: 233..261
score: 12.275303 |
| None | No IPR available | PROSITE | PS50297 | ANK_REP_REGION | coord: 134..162
score: 10.630358 |
| None | No IPR available | PROSITE | PS50297 | ANK_REP_REGION | coord: 167..195
score: 11.028328 |
| None | No IPR available | PROSITE | PS50297 | ANK_REP_REGION | coord: 101..133
score: 13.17737 |
| None | No IPR available | PROSITE | PS50297 | ANK_REP_REGION | coord: 332..364
score: 13.018181 |
| None | No IPR available | PROSITE | PS50297 | ANK_REP_REGION | coord: 68..96
score: 9.701759 |
| None | No IPR available | PROSITE | PS50297 | ANK_REP_REGION | coord: 200..228
score: 12.116116 |
| IPR002110 | Ankyrin repeat | SMART | SM00248 | ANK_2a | coord: 398..427
e-value: 0.56
score: 19.3
coord: 266..295
e-value: 2.5E-6
score: 37.1
coord: 35..64
e-value: 4.0E-5
score: 33.0
coord: 200..229
e-value: 2.5E-6
score: 37.1
coord: 68..97
e-value: 0.0015
score: 27.8
coord: 233..262
e-value: 1.9E-6
score: 37.4
coord: 332..361
e-value: 1.6E-6
score: 37.7
coord: 299..328
e-value: 1.9E-6
score: 37.4
coord: 365..394
e-value: 1.9
score: 17.5
coord: 134..163
e-value: 6.2E-5
score: 32.4
coord: 2..31
e-value: 1800.0
score: 3.1
coord: 101..130
e-value: 1.2E-6
score: 38.1
coord: 167..196
e-value: 1.6E-4
score: 31.0 |
| IPR002110 | Ankyrin repeat | PFAM | PF13606 | Ank_3 | coord: 167..195
e-value: 3.6E-4
score: 20.7 |
| IPR002110 | Ankyrin repeat | PFAM | PF12796 | Ank_2 | coord: 200..263
e-value: 6.0E-13
score: 49.2
coord: 10..98
e-value: 8.6E-14
score: 51.9
coord: 101..164
e-value: 4.8E-13
score: 49.5
coord: 337..425
e-value: 1.6E-13
score: 51.0
coord: 266..329
e-value: 6.0E-13
score: 49.2 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 398..430
score: 10.579329 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 134..166
score: 11.91483 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 101..133
score: 14.55912 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 35..67
score: 12.9031 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 68..100
score: 10.97998 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 266..298
score: 13.41059 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 233..265
score: 13.57085 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 167..199
score: 12.31548 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 332..364
score: 14.39886 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 299..331
score: 13.57085 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 200..232
score: 13.41059 |
| IPR036770 | Ankyrin repeat-containing domain superfamily | GENE3D | 1.25.40.20 | | coord: 304..344
e-value: 6.3E-14
score: 53.9 |
| IPR036770 | Ankyrin repeat-containing domain superfamily | GENE3D | 1.25.40.20 | | coord: 132..232
e-value: 2.1E-32
score: 113.9 |
| IPR036770 | Ankyrin repeat-containing domain superfamily | GENE3D | 1.25.40.20 | | coord: 233..303
e-value: 1.4E-24
score: 88.2 |
| IPR036770 | Ankyrin repeat-containing domain superfamily | GENE3D | 1.25.40.20 | | coord: 345..445
e-value: 3.0E-22
score: 80.7 |
| IPR036770 | Ankyrin repeat-containing domain superfamily | GENE3D | 1.25.40.20 | | coord: 4..131
e-value: 3.9E-38
score: 132.6 |
| IPR036770 | Ankyrin repeat-containing domain superfamily | SUPERFAMILY | 48403 | Ankyrin repeat | coord: 81..429 |
| IPR036770 | Ankyrin repeat-containing domain superfamily | SUPERFAMILY | 48403 | Ankyrin repeat | coord: 7..112 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra8064.t2 ID=Ggra8064.t2|Name=Ggra8064.t2|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1020bp
MADCNGFRTATRSGDLLRVQQLLKSGADLHSTDNKRWNALHLAARNAQLD
VVKELLERGADLHSTDNKRWNALHLSATHAQLDVVKELLERGADLHSTTN
DGWNALHLAARNAQLDVVKELLERGADLHSTDNKRWNALHLAARYAQLDV
VKELLERGADLHSTTNDGWNALNLAARNAQLDVVKELLERGADLHSTTND
GCNALHLAARYAQLDVVKELLERGADLHSTTNDGWNALHLAARYAQLDVV
KELLERGADLHSTTNDGCNALHLAARYAQLDVVKELLERGADLHSTTNDG
WNALHLAARYAQLDVVKELLERGADLHSTTNDGCNALHLAARNAQLDVVK
ELLERGADLHSTDNKRWNALHHASREGQMNAAVALLHGGCDLHRRDGTGR
TALHFAAQFGYTELAAMLWGAGADPFKMDITLRSARAPLKRKDRELYNQM
GAGRVSQPTLPPLPPEAIDTPTPLTPLQDALQSVLQASTLASQHYTTLIN
KQNCSRSLPEWNAAHNLLVLAVTDGHIDPEHPDGDLYFWRDQLYCTVSDL
AISNRQDKLVVFNCLRRAQQLNLIDSADAYIQGIHLRQSMNSELFVLRKA
CVTLFERLVSLESNLDELRASFDAYRQQRLYCNVIAIALKLIPIAGGVVS
NIVEVAADLCGELSGADVIEYSLSTACAILEQHNFSKLPQSKQAQIVNVF
EEFGFTTEQVRSLFQNCESLAVSSISNAPSPLEATSSSDRRCQSHTPVSI
PPALSEDANANFSHQNVAEESDSSQGDPNTSDSGESDRDESDSAGVIEID
SHGTDGVESPDEQQTLRNLNRCDSTLAAIEFAKEWTHFVLDSNNEDDQLF
SRWNECLNRFLAYENVSPQSLRGASQSSISRFKEAAKLFVSREIEQTAVK
IGYSFRLAQFVHRYLRQANGQTTRTSDTAQSEIIKMAKEWTQFTLGARNE
NKQLHARLNGYLVQFLENGSISPLSLKFGLPSDIRELQNAVEQFIEDLLG
QEMRVGYYLKLTRFLNPHR* back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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