Ggra8062.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8062.t1
Unique NameGgra8062.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length259
Homology
BLAST of Ggra8062.t1 vs. uniprot
Match: A0A2V3IV40 (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV40_9FLOR)

HSP 1 Score: 171 bits (433), Expect = 3.250e-49
Identity = 99/241 (41.08%), Postives = 151/241 (62.66%), Query Frame = 0
Query:    4 LTLTVLTLLLAAAAQGRLTHVAGSSHSLLQFGSAESSQNFLLQLADGEQLADAAVTTADTHVLTSHQVSVHKVSDSLSNISLTHMFDRMPGDLSYTLSVRTRSRDGALRTHSLQRTHSVYGVVFFDAAAADGRRDERAMVSGDFGHGVQLQAPTGNERRSVRLQYVAHAPAAQAADLGLRTHVIAQRDEPRALHERDVSIDGRALTLVLQPQRAGANLVLVEGRNLVLDGESFETFIPVRV 244
            L L++ TLLL +  +  L H  GSS +LLQ+GSAES+Q FL +L D  QL +  + T++  ++TS+ + V ++SD+L NI+ T  F+ +PG+  Y ++ RT S  GA   ++++R HSVYG+ F+D +         A++SGDFG+G+ L + +  E   VRL+Y+A+ P   A    L  +V+  R +   L + DVSIDG  L + L+P R G+ L+ +E  NLV+DGESFET + VRV
Sbjct:    4 LVLSLFTLLLLSVVESSLIHTQGSSETLLQYGSAESTQFFLFELNDTAQLVNTTLETSNHSIITSYVIKVDQISDTLFNITATLFFEYLPGEAVYQIAARTESPGGA-SIYTMERNHSVYGMAFYDDS-----HGTMALISGDFGYGLSLISSSLGEE-PVRLKYIANVPREVA--FNLTANVLFNRVQGAMLEDDDVSIDGDGLYIKLRPHRIGSALITIESSNLVVDGESFETAVIVRV 235          
BLAST of Ggra8062.t1 vs. uniprot
Match: A0A2V3IBJ0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBJ0_9FLOR)

HSP 1 Score: 113 bits (283), Expect = 1.960e-27
Identity = 71/202 (35.15%), Postives = 110/202 (54.46%), Query Frame = 0
Query:   43 FLLQLADGEQLADAAVTTADTHVLTSHQVSVHKVSDSLSNISLTHMFDRMPGDLSYTLSVRTRSRDGALRTHSLQRTHSVYGVVFFDAAAADGRRDERAMVSGDFGHGVQLQAPTGNERRSVRLQYVAHAPAAQAADLGLRTHVIAQRDEPRALHERDVSIDGRALTLVLQPQRAGANLVLVEGRNLVLDGESFETFIPVRV 244
            FL +L D  QL +  + T++  ++TS+ + V ++SD+L NI+ T  F+ +PG+  Y ++ RT S  GA   ++++R HSVYG+ F+D +         A++SGDFG    +             + VA  P A         +V+  R     L + DVSIDG  L + L+P   G+ L+ +E  NLV+DGESFET + VRV
Sbjct:   10 FLFELNDTAQLVNTTLETSNHSIITSYVIKVDQISDTLFNITATLFFEYLPGEAVYQIAARTESPGGA-SIYTMERNHSVYGMAFYDDS-----HGTMALISGDFGTSQNVP------------REVAFNPTA---------NVLFNRVHGAMLEDDDVSIDGDGLYIKLRPHGIGSALITIESSNLVVDGESFETAVIVRV 184          
The following BLAST results are available for this feature:
BLAST of Ggra8062.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IV403.250e-4941.08Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3IBJ01.960e-2735.15Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..258
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000867_piloncontigtig00000867_pilon:154873..155649 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8062.t1Ggra8062.t1Gracilaria gracilis GNS1m malemRNAtig00000867_pilon 154873..155649 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8062.t1 ID=Ggra8062.t1|Name=Ggra8062.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=259bp
MNALTLTVLTLLLAAAAQGRLTHVAGSSHSLLQFGSAESSQNFLLQLADG
EQLADAAVTTADTHVLTSHQVSVHKVSDSLSNISLTHMFDRMPGDLSYTL
SVRTRSRDGALRTHSLQRTHSVYGVVFFDAAAADGRRDERAMVSGDFGHG
VQLQAPTGNERRSVRLQYVAHAPAAQAADLGLRTHVIAQRDEPRALHERD
VSIDGRALTLVLQPQRAGANLVLVEGRNLVLDGESFETFIPVRVTAAAAR
RRAAAARS*
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