Ggra806.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra806.t1
Unique NameGgra806.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length319
Homology
BLAST of Ggra806.t1 vs. uniprot
Match: A0A2V3IKN9 (Lactamase_B domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKN9_9FLOR)

HSP 1 Score: 273 bits (698), Expect = 3.550e-87
Identity = 128/214 (59.81%), Postives = 164/214 (76.64%), Query Frame = 0
Query:   15 IWQTKATSSTCTLNPTIYSFKFASLNCTVVSDGPVEFNINLFSIPDAALFRSYKKNFRDINPSLIGQNVLAVDLPSGRALFDTGFFLVSGKLPQFPLFENGGQLMRNLRAARIWPSSIDFVFLTHGHADHVAGIVTEDDKRAFPNADVFVGLVEHEFWSNPAPTAPGSLVNESDLAEFAKVYRNAVAPYERTARLHLVDSENEEKASPVEGVRF 228
            I++T A+  TC+ NPTIY+F+F  +NCT++SDGP E  +N FS+P  A+ RSY+KNFR   P ++ QNVL  D+P+GRA+FDTG FL+  KLP+FPLFEN GQLM+NLRAA I PSSIDFVFLTH H DHVAGIVTE   +AFPNADVF+G  EHE+WS+P+ ++   L+    L  FA++Y +A+ PYERT   HLVD+EN E A+PVEG+RF
Sbjct:    2 IYRTSASGGTCSSNPTIYNFQFGKVNCTILSDGPTEVAVNPFSVPAPAVERSYEKNFRTAFPIVLSQNVLVADMPAGRAIFDTGSFLLPQKLPEFPLFENAGQLMKNLRAANISPSSIDFVFLTHAHGDHVAGIVTEGGTKAFPNADVFIGRREHEYWSSPSLSSTSPLLTTDALDSFAQIYLDAIRPYERTGMFHLVDTENSE-ATPVEGIRF 214          
BLAST of Ggra806.t1 vs. uniprot
Match: R7QQN0 (Lactamase_B domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQN0_CHOCR)

HSP 1 Score: 169 bits (428), Expect = 2.070e-48
Identity = 82/163 (50.31%), Postives = 108/163 (66.26%), Query Frame = 0
Query:   20 ATSSTCTLNPTIYSFKFASLNCTVVSDGPVEFNINLFSIPDAALFRSYKKNFRDINPSLIGQNVLAVDLPSGRALFDTGFFLVSGKLPQFPLFENGGQLMRNLRAARIWPSSIDFVFLTHGHADHVAGIVTEDDKRAFPNADVFVGLVEHEFWS-----NPAP 177
            A + TC+ NP+ + F F  +   VVSDGP  F++N FS+P+AAL R+Y  +FR  +P +I QNV  VD+P+GR L D G F     +P+FP F N G+L+ N+RAA I P SI  V  TH HADHVAG++T D KRAFPNA V++  V+HEFW+     NP P
Sbjct:   15 AATPTCSNNPSFHRFSFGGIQGVVVSDGPALFDVNPFSVPNAALKRNYDASFRSSSPLVIQQNVAIVDMPAGRVLVDAGSF----NIPEFPQFANAGRLLANMRAAGIAPESIQAVVFTHAHADHVAGVITADGKRAFPNAHVYIDKVDHEFWTQSNVPNPKP 173          
BLAST of Ggra806.t1 vs. uniprot
Match: A0A2V3IQV3 (Lactamase_B domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQV3_9FLOR)

HSP 1 Score: 154 bits (389), Expect = 8.220e-41
Identity = 85/210 (40.48%), Postives = 122/210 (58.10%), Query Frame = 0
Query:   20 ATSSTCTLNPTIYSFKFASLNCTVVSDGPVEFNINLFSIPDAALFRSYKKNFRDINPSLIGQNVLAVDLPS-GRALFDTGFFLVSGKLPQFPLFENGGQLMRNLRAARIWPSSIDFVFLTHGHADHVAGIVTEDDKRAFPNADVFVGLVEHEFWSNPAPTAPGSLVNESDLAEFAKVYRNAVAPYERTARLHLVDSENEEKASPVEGVRF 228
            ++ S C+ N  ++ F   +++  + SDGP+  + N FS+PDAA+  SY   FR  +P +  QN+L +DLP+ GR L DTG   ++ ++P  PLF   G LMRNLRA  + P SID V LTHGH DHVAG+V +D  R F +A V+VG +EH+FW+      P S V  + L   + +YR +++ YE    L           SP+ GV F
Sbjct:   26 SSRSQCSANAYVHHFNLNNISGIITSDGPIRQSQNFFSVPDAAVTLSYSFLFRSTSPIVWQQNILLIDLPNIGRVLVDTG---LNARVPN-PLFAGTGLLMRNLRAIHVSPDSIDVVLLTHGHPDHVAGLVDDDGNRVFRHATVYVGEIEHDFWTADPFINPSSRVPNATLENISGIYRRSLSAYEPDVVLVA------NATSPLPGVTF 225          
BLAST of Ggra806.t1 vs. uniprot
Match: A0A2V3IS55 (Lactamase_B domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS55_9FLOR)

HSP 1 Score: 152 bits (384), Expect = 4.460e-40
Identity = 81/212 (38.21%), Postives = 119/212 (56.13%), Query Frame = 0
Query:   23 STCTLNPTIYSFKFASLNCTVVSDGPVEFNINLFSIPDAALFRSYKKNFRDINPSLIGQNVLAVDLPSGRALFDTGFFLVSGKLPQFPLFENGGQLMRNLRAARIWPSSIDFVFLTHGHADHVAGIVTEDDKRAFPNADVFVGLVEHEFWSNPAPTAPGSLVNESDLAEFAKVYRNAVAPYERTARLHLVDSENEEKASPVEGVRFNNIRTY 234
            S CT N   + F+F  +  T+V DGP  F+ N F++ D+ +  SY   FR+  P     NV   DLP GR + D G F  + +LP  P   + G+L+  L+++ + PSSID+V LTHGHADHV G++ ED KR F  A+V +   EH FW   +     S++ +  + + A+ Y ++V PY +  +L LV    EE+  P+  VRF  I TY
Sbjct:   20 SVCTANSPTFRFEFGKVKGTIVYDGPSFFSSNPFTVADSLVNDSYNSLFRESFPFEFSLNVAVFDLPEGRVMIDAGAFNSAERLPLIPGTSDAGRLVETLKSSGMHPSSIDYVLLTHGHADHVLGLIDEDGKRVFRKAEVLISKEEHMFWFADSVKLNDSVIPQPIVDQLARAYSDSVRPYLKGGKLRLV----EERGCPLPSVRF--IPTY 225          
BLAST of Ggra806.t1 vs. uniprot
Match: R7Q4J2 (Lactamase_B domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4J2_CHOCR)

HSP 1 Score: 148 bits (373), Expect = 1.490e-38
Identity = 86/205 (41.95%), Postives = 117/205 (57.07%), Query Frame = 0
Query:   25 CTLNPTIYSFKFASLNCTVVSDGPVEFNINLFSIPDAALFRSYKKNFRDINPSLIGQNVLAVDLPSGRALFDTGFFLVSGKLPQFPLFENGGQLMRNLRAARIWPSSIDFVFLTHGHADHVAGIVTEDDKRAFPNADVFVGLVEHEFW-SNPAPTAPGSLVNESDLAEFAKVYRNAVAPYERTARLHLVDSENEEKASPVEGVRF 228
            C  N   Y F+   +  TV+ DGP+ F+ N F +P  AL  +YK  FR I P  + QNVL ++   GR L D G    S      PL  +GG L RN+RAA I P SID +FLTH HADHV+G++  D  RAF NA V++G+ EH FW + P P +    + ++ L  FA+ YR ++APY   +RL LV     +  +P+ G RF
Sbjct:   20 CQENSATYHFRLGDIRGTVLYDGPLTFSTNPFFVPFEALRSTYKACFRPIEPLTLSQNVLLLESKVGRVLVDPG----SRGGQANPLLASGGLLFRNMRAAGILPESIDHIFLTHAHADHVSGLLGLDGGRAFRNAKVYIGIKEHRFWITEPLPISEDHPLRDT-LLGFARTYRQSIAPY--ASRLVLV----RDGGAPLPGFRF 213          
BLAST of Ggra806.t1 vs. uniprot
Match: R7QPZ0 (Lactamase_B domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPZ0_CHOCR)

HSP 1 Score: 132 bits (333), Expect = 9.310e-33
Identity = 81/205 (39.51%), Postives = 111/205 (54.15%), Query Frame = 0
Query:   25 CTLNPTIYSFKFASLNCTVVSDGPVEFNINLFSIPDAALFRSYKKNFRDINPSLIGQNVLAVDLPSGRALFDTGFFLVSGKLPQFPLFENGGQLMRNLRAARIWPSSIDFVFLTHGHADHVAGIVTEDDKRAFPNADVFVGLVEHEFW-SNPAPTAPGSLVNESDLAEFAKVYRNAVAPYERTARLHLVDSENEEKASPVEGVRF 228
            C  N  +Y F    +  TV+ DG + F    F  P   +  SY   FR I+P  + QNVL +D  +GR L D G     G+  + P+  + G L +N+RAA I P SID VFLTHGHADHV+G++  +   AFPNA ++VG+ E+ FW + P P      ++E        +YR+ VAPY     L LV    EE +SP+ G RF
Sbjct:   20 CQENSPVYRFTIGDIRATVIYDGFLTFTTPPFFAPVEDVNASYSACFRSIDPLTLSQNVLVLDTEAGRVLIDPG--ARGGE--EVPVLASAGLLFKNMRAAGIPPESIDHVFLTHGHADHVSGLLGLEGGPAFPNAKLYVGVTENRFWMTEPLP------ISEDHPLRDTLLYRDGVAPY--APSLQLV----EEDSSPLPGFRF 208          
BLAST of Ggra806.t1 vs. uniprot
Match: O49185 (1,4-alpha-glucan branching enzyme n=1 Tax=Gracilaria gracilis TaxID=2777 RepID=O49185_GRAGA)

HSP 1 Score: 129 bits (324), Expect = 1.180e-29
Identity = 56/69 (81.16%), Postives = 59/69 (85.51%), Query Frame = 0
Query:  250 SEIMSGSKFKAVVVPHQGPWLDCNPAWATLCVQDPNTFLYDTMFWDPPEKFKWTSPDHVKRPESLRIYE 318
            S I  GSK KA VVPHQGPWLD NPAWAT CVQD  TFLYDT+FWDPPEKFKWT+PDHVK P+SLRIYE
Sbjct:  122 SPIKHGSKVKAAVVPHQGPWLDRNPAWATFCVQDTKTFLYDTVFWDPPEKFKWTAPDHVKCPDSLRIYE 190          
BLAST of Ggra806.t1 vs. uniprot
Match: A0A7X4C0Q1 (MBL fold metallo-hydrolase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7X4C0Q1_9PROT)

HSP 1 Score: 97.1 bits (240), Expect = 2.190e-19
Identity = 56/151 (37.09%), Postives = 81/151 (53.64%), Query Frame = 0
Query:   29 PTIYSFKFASLNCTVVSDG--PVEFNINLF-SIPDAALFRSYKKNFRDINPSLIGQNVLAVDLPSGRALFDTGFFLVSGKLPQFPLFENGGQLMRNLRAARIWPSSIDFVFLTHGHADHVAGIVTEDDKRAFPNADVFVGLVEHEFWSNPA 176
            P  Y FK  ++  TV+SDG  P+      F  +    + R    NF      ++ QN+L ++  S   LFDTG     G+ P F      G++M NL  A I P+SID V  THGH DHV GI+T+D +R FPNA +++   + +FW++ A
Sbjct:   43 PYFYRFKHGAMQGTVISDGVLPLGDPSGAFLGVSKEEVGRMLTDNFLSPRNVILEQNILVLNTGSHLVLFDTGM----GQSPMFG--PTTGKMMENLAVAGIDPASIDAVLCTHGHCDHVWGIMTDDGQRNFPNAQIYISQADFDFWTDEA 187          
BLAST of Ggra806.t1 vs. uniprot
Match: MBL fold metallo-hydrolase n=1 Tax=Rhizobium sp. 2MFCol3.1 TaxID=1246459 RepID=UPI00035D238F (MBL fold metallo-hydrolase n=1 Tax=Rhizobium sp. 2MFCol3.1 TaxID=1246459 RepID=UPI00035D238F)

HSP 1 Score: 92.4 bits (228), Expect = 9.380e-18
Identity = 68/203 (33.50%), Postives = 104/203 (51.23%), Query Frame = 0
Query:   29 PTIYSFKFASLNCTVVSDGPVEFNINLF--SIPDAA--LFRSYKKNFRDINPSLIGQNVLAVDLPSGRALFDTGFFLVSGKLPQFPLFENGGQLMRNLRAARIWPSSIDFVFLTHGHADHVAGIVTEDDKRAFPNADVFVGLVEHEFWSNPAPTAPGSLVNESDLAEFAK----VYRNAVAPYERTARLHLVDSENEEKASPV 223
            P +Y +   ++  T ++DG     + +   + P+AA  L R       D+ P ++  N   +D PS R L DTGF    G  P      + G++  NL AA I PS ID + LTHGH DH+AG++T++ K AFPNA++FV   EH +W++ A         +S   +F K    ++R + A Y +  R  L D  ++E  S V
Sbjct:   45 PGVYRWTVGAITVTAIADGYSTLPLAIVPGATPEAADALAREAFLPTGDL-PCIV--NTFVIDTPSKRLLVDTGF----GPGPGL----HTGKIWENLTAAGIAPSEIDALVLTHGHPDHIAGMLTKEGKAAFPNAELFVHAREHAYWTDDAA--------QSKAPDFQKGWFDLFRTSAAAYAK--RTTLFDRNDQEIVSGV 226          
BLAST of Ggra806.t1 vs. uniprot
Match: A0A2D7FD12 (MBL fold metallo-hydrolase n=2 Tax=Hyphomicrobiaceae TaxID=45401 RepID=A0A2D7FD12_9HYPH)

HSP 1 Score: 92.4 bits (228), Expect = 1.020e-17
Identity = 52/151 (34.44%), Postives = 82/151 (54.30%), Query Frame = 0
Query:   29 PTIYSFKFASLNCTVVSDG--PVEFNINLF-SIPDAALFRSYKKNFRDINPSLIGQNVLAVDLPSGRALFDTGFFLVSGKLPQFPLFENGGQLMRNLRAARIWPSSIDFVFLTHGHADHVAGIVTEDDKRAFPNADVFVGLVEHEFWSNPA 176
            P  Y FK  S+  TV+SDG  P     ++F  I    + +    NF D +  ++ QN+L ++      LFDTG     G+   F      G++M NL+ A I P++ID +  THGH DHV GI+++  +R FPNA +++   + +FW++ A
Sbjct:   43 PYFYRFKHGSMQGTVISDGVLPAGDPSSIFLGISKEEVGKMLTSNFLDPSNVILEQNILVLNTGQKLVLFDTGM----GQSTMFG--PTTGKMMENLKVAGIDPAAIDAIVCTHGHCDHVWGIMSDSGERNFPNAQIYISQTDFDFWTDEA 187          
The following BLAST results are available for this feature:
BLAST of Ggra806.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IKN93.550e-8759.81Lactamase_B domain-containing protein n=1 Tax=Grac... [more]
R7QQN02.070e-4850.31Lactamase_B domain-containing protein n=1 Tax=Chon... [more]
A0A2V3IQV38.220e-4140.48Lactamase_B domain-containing protein n=1 Tax=Grac... [more]
A0A2V3IS554.460e-4038.21Lactamase_B domain-containing protein n=1 Tax=Grac... [more]
R7Q4J21.490e-3841.95Lactamase_B domain-containing protein n=1 Tax=Chon... [more]
R7QPZ09.310e-3339.51Lactamase_B domain-containing protein n=1 Tax=Chon... [more]
O491851.180e-2981.161,4-alpha-glucan branching enzyme n=1 Tax=Gracilar... [more]
A0A7X4C0Q12.190e-1937.09MBL fold metallo-hydrolase n=1 Tax=Alphaproteobact... [more]
MBL fold metallo-hydrolase n=1 Tax=Rhizobium sp. 2MFCol3.1 TaxID=1246459 RepID=UPI00035D238F9.380e-1833.50MBL fold metallo-hydrolase n=1 Tax=Rhizobium sp. 2... [more]
A0A2D7FD121.020e-1734.44MBL fold metallo-hydrolase n=2 Tax=Hyphomicrobiace... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.20.20.80Glycosidasescoord: 300..318
e-value: 2.4E-7
score: 31.5
NoneNo IPR availablePANTHERPTHR42978QUORUM-QUENCHING LACTONASE YTNP-RELATED-RELATEDcoord: 26..217
NoneNo IPR availablePANTHERPTHR42978:SF6METALLO-BETA-LACTAMASE SUPERFAMILY PROTEINcoord: 26..217
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..318
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeGENE3D3.60.15.10coord: 15..228
e-value: 1.3E-31
score: 111.8
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeSUPERFAMILY56281Metallo-hydrolase/oxidoreductasecoord: 26..187
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 248..299
e-value: 2.4E-7
score: 31.5
IPR001279Metallo-beta-lactamasePFAMPF00753Lactamase_Bcoord: 81..148
e-value: 9.0E-8
score: 32.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000234_piloncontigtig00000234_pilon:46641..48870 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra806.t1Ggra806.t1Gracilaria gracilis GNS1m malemRNAtig00000234_pilon 46641..48870 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra806.t1 ID=Ggra806.t1|Name=Ggra806.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=319bp
MKYLKIFVLTVICVIWQTKATSSTCTLNPTIYSFKFASLNCTVVSDGPVE
FNINLFSIPDAALFRSYKKNFRDINPSLIGQNVLAVDLPSGRALFDTGFF
LVSGKLPQFPLFENGGQLMRNLRAARIWPSSIDFVFLTHGHADHVAGIVT
EDDKRAFPNADVFVGLVEHEFWSNPAPTAPGSLVNESDLAEFAKVYRNAV
APYERTARLHLVDSENEEKASPVEGVRFNNIRTYTGAIADALRYRYAKYS
EIMSGSKFKAVVVPHQGPWLDCNPAWATLCVQDPNTFLYDTMFWDPPEKF
KWTSPDHVKRPESLRIYE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036866RibonucZ/Hydroxyglut_hydro
IPR013783Ig-like_fold
IPR001279Metallo-B-lactamas