Ggra8045.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8045.t1
Unique NameGgra8045.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length130
Homology
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BLAST of Ggra8045.t1 vs. uniprot
Match: A0A2V3J4Q2 (Structural maintenance of chromosomes protein 6 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4Q2_9FLOR)

HSP 1 Score: 131 bits (329), Expect = 7.100e-33
Identity = 64/98 (65.31%), Postives = 79/98 (80.61%), Query Frame = 0 
Query:    1 MTYIAHHLQDAALLKSTFPGRFRPNVLIFDLTRRGYQIGDGDIPASRD-SRYRTILETMDIEHDAVFNALVDMAQIEKMVLSMENDVRKLAWKRIPNV 97
            +TYI H  +DA LLKS FP RF+PNVLI +L R  Y IG GD+PA +   RYRTILETM++ +DAVFNALVDMA++EK VLS E+DV++LAWKR+PNV
Sbjct:  633 LTYIVHDTKDAILLKSIFPRRFKPNVLISNLRRGRYDIGHGDMPALQQYDRYRTILETMEVRNDAVFNALVDMAKVEKNVLSSEDDVKRLAWKRVPNV 730
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BLAST of Ggra8045.t1 vs. uniprot
Match: R7QKQ0 (SMC_N domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKQ0_CHOCR)

HSP 1 Score: 79.7 bits (195), Expect = 8.230e-15
Identity = 42/97 (43.30%), Postives = 61/97 (62.89%), Query Frame = 0 
Query:    3 YIAHHLQDAALLKSTFP-GRFRPNVLIFDLTRRGYQIGDGDIPASRDSRYRTILETMDIEHDAVFNALVDMAQIEKMVLSM-ENDVRKLAWKRIPNV 97
            +I     DA +L+   P G  RP++ I D+ R  Y +G  D+P      ++TILET++I H+AVFN L+D + IE+ VLS  E+DV +L W RIPN+
Sbjct:  633 FIVMDSHDAKVLEGLLPRGGHRPSITIADVGRDRYAVGREDMPDVSSYGHKTILETVEIRHNAVFNLLLDQSHIERQVLSATEDDVTQLGWSRIPNM 729
The following BLAST results are available for this feature:
BLAST of Ggra8045.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J4Q27.100e-3365.31Structural maintenance of chromosomes protein 6 n=... [more]
R7QKQ08.230e-1543.30SMC_N domain-containing protein n=1 Tax=Chondrus c... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000261_piloncontigtig00000261_pilon:42651..43040 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8045.t1Ggra8045.t1Gracilaria gracilis GNS1m malemRNAtig00000261_pilon 42651..43040 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8045.t1 ID=Ggra8045.t1|Name=Ggra8045.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=130bp
MTYIAHHLQDAALLKSTFPGRFRPNVLIFDLTRRGYQIGDGDIPASRDSR
YRTILETMDIEHDAVFNALVDMAQIEKMVLSMENDVRKLAWKRIPNVCTL
YGTNELTELIYEMDRIHFDMRLIMFVRDM*
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