Ggra8043.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8043.t1
Unique NameGgra8043.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length639
Homology
BLAST of Ggra8043.t1 vs. uniprot
Match: A0A2V3ILR0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILR0_9FLOR)

HSP 1 Score: 333 bits (855), Expect = 1.320e-100
Identity = 153/203 (75.37%), Postives = 181/203 (89.16%), Query Frame = 0
Query:  285 WNFDSIWEMVLFGDEHKQDLSMVADAPESLPESAKRQFPLAYASTRRGLIIMRSTHSQMTSYMHFDARPDSFYLGHDNADRGIITFSAMKQRWIDDLSWKENVDSRKHSLLHVDGIAQAVKAPSVTILKVVDSPSSSIASADLTYTYNIQWAQAWQGPSIGTADVLEYRKDGSSYEKKYSFPDAELNSPWDLGWPMEDDASEI 487
            W   ++ +MV+FGDEH+Q+L  VADAPE+LP +AK+ FPLAY STRRGLII RS++SQM+SYMHFDARPDSFYLGHDNADRG ITFSA+K+RW+DDL W+ N DSRKHSL+H+DG+AQAVKAPSVTILK VD+ SS+IASADLTYTYN+QWAQAWQGPSIGT DVLEYR+DGS+Y+K Y+F D E +SPWDLGWPMEDDA +I
Sbjct:  403 WWIQTMTQMVVFGDEHQQNLDDVADAPETLPPAAKKHFPLAYVSTRRGLIIARSSYSQMSSYMHFDARPDSFYLGHDNADRGAITFSALKRRWLDDLPWEHNFDSRKHSLMHIDGLAQAVKAPSVTILKAVDTLSSTIASADLTYTYNVQWAQAWQGPSIGTGDVLEYRQDGSTYKKMYTFADPEEHSPWDLGWPMEDDAVDI 605          
BLAST of Ggra8043.t1 vs. uniprot
Match: A0A2V3J5A4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5A4_9FLOR)

HSP 1 Score: 197 bits (501), Expect = 1.030e-49
Identity = 101/201 (50.25%), Postives = 127/201 (63.18%), Query Frame = 0
Query:  287 FDSIWEMVLFGDEHKQDLSMVADAPESLPESAKRQFPLAYASTRRGLIIMRSTHSQMTSYMHFDARPDSFYLGHDNADRGIITFSAMKQRWIDDLSWKENVDSRKHSLLHVDGIAQAVKAPSVTILKVVDSPSSSIASADLTYTYNIQWAQAWQGPSIGTADVLEYRKDGSSYEKKYSFPDAELNSPWDLGWPMEDDASEI 487
            F  +  M +FG EH    +  A +P  L E  K  FPL+Y S RRGL+I RS+ S+   Y+HFDARPDSF+ GHDNADRG  T++A +  WIDD  WK N+DSRKHSLLH+DG+AQ  KAPSV ++K  D+    IA+ADLTY YN QWA+ W G S     V  Y  DG+   +   F DAE   P D GWP +DD  ++
Sbjct:  479 FQDMTPMTIFGGEHGN--ATRASSPAGLGEYLKH-FPLSYYSPRRGLLIARSSESENALYIHFDARPDSFFPGHDNADRGGFTYTAYRSTWIDDHWWKANLDSRKHSLLHIDGLAQDEKAPSVRMIKRDDNGDEVIAAADLTYAYNFQWARNWPGESPLRQYVNVYHADGTLVRELEWFTDAEYGHPIDFGWPSDDDGEDL 676          
BLAST of Ggra8043.t1 vs. uniprot
Match: A0A2V3ILQ5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILQ5_9FLOR)

HSP 1 Score: 140 bits (352), Expect = 7.270e-31
Identity = 79/195 (40.51%), Postives = 102/195 (52.31%), Query Frame = 0
Query:  101 LIGSIRPSLLRPQLPPPSSHPRILTSPDEWQALLQRHSDPVYFNNKNTWSSSLIGLTVPNGPNASIVHKLAQLETERRTHVFSGKASVHFSSKSQFETYRRSLKPLADHLKLMTEAQSHSLFLCAFWAQV--AEKLPPAHHFLNATAMDTCINATVAWAKVLMAHRTYHCNPSCSVTNRDAEKAYLWNFDSIWEM 293
            L G IR    +P    P SHPRI+     W  LLQ HS+     N+N WS+ L   TV  GP +  +  LA LE    T  + G+A    S    +++YRR LK LA  + LM    + S FLCAFW+ V   E  P   H       +TCINA VAW+K+L+AHR YHCNP C     D  +++LWN    W+M
Sbjct:   82 LTGRIRSISAKPSELRPYSHPRIVFGRSAWNDLLQHHSERYRGGNRNDWSTYLEHHTVIRGPLSKTISHLANLEKNGFTSDYDGRA---VSQNEAYKSYRRKLKTLASSVHLMNSIHAPSFFLCAFWSGVDELETQPQIGH-----KAETCINAAVAWSKILLAHRAYHCNPVCPFAVHDPRRSFLWNVKIPWKM 268          
BLAST of Ggra8043.t1 vs. uniprot
Match: A0A202DE14 (Uncharacterized protein n=1 Tax=bacterium B17 TaxID=1932704 RepID=A0A202DE14_9BACT)

HSP 1 Score: 107 bits (266), Expect = 2.060e-20
Identity = 75/221 (33.94%), Postives = 109/221 (49.32%), Query Frame = 0
Query:  274 VTNRDAEKAYLWNFDSIWEMVLFGDEHKQDLSMVADAPESLPESAKRQFPLAYASTRRGLIIMRSTHSQMTSYMHFDARPDSFYLGHDNADRGIITFSAMKQRWIDDLSWKENVDSRKHSLLHVDGIAQAVKAPSVTILKVVDSPSSSIASADLTYTYNIQWAQAWQGPSIGTADVLEYRKDGSSYEKKYS-FPDAELNSPWDLGWPMEDDASEIVNIING 493
            V   + E+ + W      + +LFG   K  +S      E++ + AK   PL+     RG I+ RS  S    Y  FDARPD+  +GHD  DRG  + SA+ + W     + +   S ++SL+H+DG AQA KAP+V +L   D    + A+ADL Y Y+ +W   W   S                 KK+S   + E N P DLGWP E+  +E+ + ING
Sbjct:  361 VMGDEYERRFRWQ--GFLDYLLFGTAWKGSVSR-----ETMLKKAK--LPLSVFYPVRGKIVARSDWSSDALYATFDARPDAHMIGHDKVDRGNFSLSALGRMWAFTGDFHDYDLSTENSLVHIDGKAQAWKAPAVRMLWNSDDGRVAGAAADLKYAYDWEWTPPWPKMS-----------------KKFSPLWEPEKNGPLDLGWPEENRTAELPDSING 555          
BLAST of Ggra8043.t1 vs. uniprot
Match: A0A3D4CYI5 (Uncharacterized protein (Fragment) n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A3D4CYI5_9BACT)

HSP 1 Score: 98.2 bits (243), Expect = 5.620e-18
Identity = 67/203 (33.00%), Postives = 99/203 (48.77%), Query Frame = 0
Query:  292 EMVLFGDEHKQDLSMVADAPESLPESAKRQ-FPLAYASTRRGLIIMRSTHSQMTSYMHFDARPDSFYLGHDNADRGIITFSAMKQRWIDDLSWKENVDSRKHSLLHVDGIAQAVKAPSVTILKVVDSPSSSIASADLTYTYNIQWAQAWQGPSIGTADVLEYRKDGSSYEKKYSFPDAELNSPWDLGWPMEDDASEIVNIING 493
            + +L+G + K         P++     KR   PL+ +   RG  I RS  S    Y+ FDARPD+  +GHD  DRG  + SA+ + W     + +   SR++SL+H+DG AQA KAPS  +L      + + A+ADL Y Y+ +W   W              K G SY   +   + E +S  DLGWP +    E+   I+G
Sbjct:  122 DYLLYGSDWK--------GPDNRESMLKRAGLPLSVSYPVRGKFIARSDWSSDAIYLTFDARPDAHLIGHDKVDRGNFSMSALGRVWAFSGDFHQWNTSRENSLVHIDGKAQAWKAPSARMLWNRHGKNVAGAAADLKYAYDWEWTPPWP-------------KWGKSYPAPW---EPEKSSASDLGWPRDHLIPEVDGAIHG 300          
BLAST of Ggra8043.t1 vs. uniprot
Match: A0A3M0Z3F2 (Uncharacterized protein (Fragment) n=1 Tax=Lentisphaerae bacterium TaxID=1932692 RepID=A0A3M0Z3F2_9BACT)

HSP 1 Score: 97.8 bits (242), Expect = 1.210e-17
Identity = 74/232 (31.90%), Postives = 108/232 (46.55%), Query Frame = 0
Query:  260 LMAHRTYHCNPSCSVTNR-----DAEKAYLWNFDSIW-EMVLFGDEHKQDLSMVADAPESLPESAKRQ-FPLAYASTRRGLIIMRSTHSQMTSYMHFDARPDSFYLGHDNADRGIITFSAMKQRWI--DDLSWKENVDSRKHSLLHVDGIAQAVKAPSVTILKVVDSPSSSIASADLTYTYNIQWAQAWQGPSIGTADVLEYRKDGSSYEKKYSFP-DAELNSPWDLGWPME 481
            L+AH  Y  +P+ +   R     D  + + W     W + +LFG +         + P+S  E  K+   PL+     RG ++ RS  S    ++  DARPD+F +GHD  DRG  T SA+ + +    D  W     S+++SL+H+DG A+A KAPSV ++   D      A ADL Y Y+ QW   W  P +               E  Y  P + E + P  LGWP E
Sbjct:  185 LVAHYLYPHSPATNFILRQICGDDFSRPFRWQG---WLDYMLFGCD--------LEGPQSREELLKQSGLPLSVYYPERGKVVARSDWSDDALHVTLDARPDAFLIGHDKVDRGTFTLSALGRTFAFSGDFHWFNT--SQENSLVHIDGKAEAWKAPSVKMVSYHDDGEHVSAVADLKYAYDWQWTPPW--PKV---------------EATYKSPWEPERSDPRQLGWPEE 386          
BLAST of Ggra8043.t1 vs. uniprot
Match: A0A2E6S8W7 (Uncharacterized protein n=1 Tax=Roseibacillus sp. TaxID=2024856 RepID=A0A2E6S8W7_9BACT)

HSP 1 Score: 97.1 bits (240), Expect = 3.170e-17
Identity = 66/180 (36.67%), Postives = 88/180 (48.89%), Query Frame = 0
Query:  316 ESAKRQFPLAYASTR--RGLIIMRSTHSQMTSYMHFDARPDSFYLGHDNADRGIITFSAMKQRWIDDLSWKENVDSRKHSLLHVDGIAQAVKAPSVTILKVVDSPSSSIASADLTYTYNIQWAQAWQGPSIGTADVLEYRKDGSSYEKKYSFPDAELNSPWDLGWPMEDDASEIVNIING 493
            E   R+  LA + T   RG  I RS  S    Y+ FDARPD+  +GHD ADRG  + SA+ + W     +     SR++SL+HVDG AQA KAPS  +L        + A+ADL Y Y+  W   W              K G  YE  +   + E +S  DLGWP +    E+   I+G
Sbjct:  422 EDMLREAGLALSVTYPVRGKFIARSDWSSDAMYLTFDARPDAHLIGHDKADRGNFSMSALGRVWAFSGDFHLWNTSRENSLVHVDGKAQAWKAPSARMLWSSHGEGMAGAAADLKYAYDWAWTPPWP-------------KWGKDYESPW---EPEKSSAQDLGWPRDHLIPEVAGPIHG 585          
BLAST of Ggra8043.t1 vs. uniprot
Match: A0A2E8LYC8 (Uncharacterized protein n=2 Tax=Verrucomicrobiales TaxID=48461 RepID=A0A2E8LYC8_9BACT)

HSP 1 Score: 96.7 bits (239), Expect = 4.050e-17
Identity = 68/202 (33.66%), Postives = 100/202 (49.50%), Query Frame = 0
Query:  292 EMVLFGDEHKQDLSMVADAPESLPESAKRQFPLAYASTRRGLIIMRSTHSQMTSYMHFDARPDSFYLGHDNADRGIITFSAMKQRWIDDLSWKENVDSRKHSLLHVDGIAQAVKAPSVTILKVVDSPSSSIASADLTYTYNIQWAQAWQGPSIGTADVLEYRKDGSSYEKKYSFPDAELNSPWDLGWPMEDDASEIVNIING 493
            + +L+G + K       D  ES+ + A    PL+ +   RG  I RS  S    Y+ FDARPD+  +GHD  DRG  + SA+ + W     + +   SR++SL+H+DG AQA KAPS  +L      + + A+ADL Y Y+ +W   W              K G SY   +   + E +S  DLGWP +    E+   I+G
Sbjct:  383 DYLLYGSDWKGP-----DNRESMLKGAG--LPLSVSYPVRGKFIARSDWSSDAIYLTFDARPDAHLIGHDKVDRGNFSMSALGRVWAFSGDFHQWNTSRENSLVHIDGKAQAWKAPSARMLWNRHGKNVAGAAADLKYAYDWEWTPPWP-------------KWGKSYPAPW---EPEKSSASDLGWPRDHLIPEVDGEIHG 561          
The following BLAST results are available for this feature:
BLAST of Ggra8043.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A2V3ILR01.320e-10075.37Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J5A41.030e-4950.25Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ILQ57.270e-3140.51Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A202DE142.060e-2033.94Uncharacterized protein n=1 Tax=bacterium B17 TaxI... [more]
A0A3D4CYI55.620e-1833.00Uncharacterized protein (Fragment) n=1 Tax=Verruco... [more]
A0A3M0Z3F21.210e-1731.90Uncharacterized protein (Fragment) n=1 Tax=Lentisp... [more]
A0A2E6S8W73.170e-1736.67Uncharacterized protein n=1 Tax=Roseibacillus sp. ... [more]
A0A2E8LYC84.050e-1733.66Uncharacterized protein n=2 Tax=Verrucomicrobiales... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 571..605
NoneNo IPR availableGENE3D2.70.98.70coord: 329..441
e-value: 1.0E-6
score: 30.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 607..638
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 614..638
NoneNo IPR availableCDDcd15841SNARE_Qccoord: 570..601
e-value: 7.5535E-4
score: 35.9972
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 473..623
e-value: 2.4E-8
score: 36.0
IPR038729Rad50/SbcC-type AAA domainPFAMPF13476AAA_23coord: 488..597
e-value: 3.9E-6
score: 27.5
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 540..602
score: 9.07135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000261_piloncontigtig00000261_pilon:33522..41539 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8043.t1Ggra8043.t1Gracilaria gracilis GNS1m malemRNAtig00000261_pilon 33522..41539 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8043.t1 ID=Ggra8043.t1|Name=Ggra8043.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=639bp
MPPQRDAPAQRLRAAASVTAARLSCFAACVRLPDEVAAPLVLCCPMCVPS
SPSFGTMQPLSAAAPPPPPRPYPVPTSRFYLSNITGSARYYTLENPFPDS
LIGSIRPSLLRPQLPPPSSHPRILTSPDEWQALLQRHSDPVYFNNKNTWS
SSLIGLTVPNGPNASIVHKLAQLETERRTHVFSGKASVHFSSKSQFETYR
RSLKPLADHLKLMTEAQSHSLFLCAFWAQVAEKLPPAHHFLNATAMDTCI
NATVAWAKVLMAHRTYHCNPSCSVTNRDAEKAYLWNFDSIWEMVLFGDEH
KQDLSMVADAPESLPESAKRQFPLAYASTRRGLIIMRSTHSQMTSYMHFD
ARPDSFYLGHDNADRGIITFSAMKQRWIDDLSWKENVDSRKHSLLHVDGI
AQAVKAPSVTILKVVDSPSSSIASADLTYTYNIQWAQAWQGPSIGTADVL
EYRKDGSSYEKKYSFPDAELNSPWDLGWPMEDDASEIVNIINGENGSGKS
AIVVALQVGLAGHDHDIERGSKIQIRKNLDSLVSERDGRHHKVDEASSEV
QMFNKTFQEIRRNKIKFDMELKSHKRRLTEIDAEADEADNRIRDTNSRME
QARKEHFCRSKAEITTTGRVSAVGTPGERSTGKNPGRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR038729Rad50/SbcC_AAA
IPR000727T_SNARE_dom