Ggra8041.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8041.t1
Unique NameGgra8041.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length95
Homology
BLAST of Ggra8041.t1 vs. uniprot
Match: A0A2V3IPG4 (Ribosomal protein S14, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPG4_9FLOR)

HSP 1 Score: 147 bits (372), Expect = 1.840e-44
Identity = 78/93 (83.87%), Postives = 84/93 (90.32%), Query Frame = 0
Query:    2 HMDQVRRQLFAKKEIPRLVLKSISMSSRLPSSIRQAAQTRLSEMDRNGSAVRIRMRCVLTGRPRAVDSQTRLSRIMFRKLASEGRLPGVWKAR 94
            HMDQVRR+LFA+ EIPRLVLKSI MSSRLP S+RQAAQ RLS M  N SA RIRMRCVLTGRPRAVDS+TRLSRIMFRKLASEG+LPG+WKAR
Sbjct:    5 HMDQVRRRLFAEAEIPRLVLKSIIMSSRLPPSVRQAAQARLSAMPANTSATRIRMRCVLTGRPRAVDSKTRLSRIMFRKLASEGQLPGIWKAR 97          
BLAST of Ggra8041.t1 vs. uniprot
Match: A0A7C8ZGP7 (Uncharacterized protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C8ZGP7_OPUST)

HSP 1 Score: 84.0 bits (206), Expect = 1.180e-18
Identity = 46/91 (50.55%), Postives = 64/91 (70.33%), Query Frame = 0
Query:    3 MDQVRRQLFAKKEIPRLVLKSISMSSRLPSSIRQAAQTRLSEMDRNGSAVRIRMRCVLTGRPRAVDSQTRLSRIMFRKLASEGRLPGVWKA 93
            +D  RR L AK E+ R + KS+     LPS++R+  + +LS++ RN S+ RIR RC+ TGRPRAV    R+SRI+FR+LAS+GRL G+ KA
Sbjct:   52 LDYKRRLLVAKYELRRKLYKSLCRDLDLPSNLREKHRYKLSKLPRNSSSTRIRNRCIFTGRPRAVYENFRMSRIVFRELASQGRLHGIKKA 142          
BLAST of Ggra8041.t1 vs. uniprot
Match: A0A146I603 (Ribosomal protein S14 n=1 Tax=Diphylleia rotans TaxID=190327 RepID=A0A146I603_9EUKA)

HSP 1 Score: 82.4 bits (202), Expect = 1.470e-18
Identity = 48/90 (53.33%), Postives = 59/90 (65.56%), Query Frame = 0
Query:    4 DQVRRQLFAKKEIPRLVLKSISMSSRLPSSIRQAAQTRLSEMDRNGSAVRIRMRCVLTGRPRAVDSQTRLSRIMFRKLASEGRLPGVWKA 93
            DQ RR LF K E  R+VLKSI  +  LP  IR AAQ  L+ + ++ S VRIR RCVLTGR R      ++SRI FR+LAS G +PG+ KA
Sbjct:    8 DQKRRSLFVKHESLRIVLKSIIYNQELPEEIRFAAQLELASLPKDSSKVRIRNRCVLTGRARGNYRLFKMSRIKFRELASMGMIPGITKA 97          
BLAST of Ggra8041.t1 vs. uniprot
Match: W9SCF6 (Ribosomal protein S14 n=1 Tax=Morus notabilis TaxID=981085 RepID=W9SCF6_9ROSA)

HSP 1 Score: 79.7 bits (195), Expect = 2.100e-17
Identity = 44/90 (48.89%), Postives = 63/90 (70.00%), Query Frame = 0
Query:    4 DQVRRQLFAKKEIPRLVLKSISMSSRLPSSIRQAAQTRLSEMDRNGSAVRIRMRCVLTGRPRAVDSQTRLSRIMFRKLASEGRLPGVWKA 93
            D  RRQL AK E+ R + K+++  + LP+ +R+A + +LS++ RN S  RIR RCV TGRPR + +  R+SRI+FR+LAS+  L GV KA
Sbjct:   16 DNHRRQLAAKFELQRKLYKALANDTTLPNDVREANRIKLSKLPRNSSFTRIRNRCVFTGRPRGIVTLFRMSRIVFRELASKKLLDGVQKA 105          
BLAST of Ggra8041.t1 vs. uniprot
Match: ribosomal protein S14, mitochondrial-like n=2 Tax=Mangifera indica TaxID=29780 RepID=UPI001CFB204D (ribosomal protein S14, mitochondrial-like n=2 Tax=Mangifera indica TaxID=29780 RepID=UPI001CFB204D)

HSP 1 Score: 79.7 bits (195), Expect = 3.810e-17
Identity = 44/90 (48.89%), Postives = 60/90 (66.67%), Query Frame = 0
Query:    4 DQVRRQLFAKKEIPRLVLKSISMSSRLPSSIRQAAQTRLSEMDRNGSAVRIRMRCVLTGRPRAVDSQTRLSRIMFRKLASEGRLPGVWKA 93
            D  RR L AK E+ R + K++   + LPS IR+    +LS++ RN S  R+R RC+ TGRPRAV  + R+SRI+FR LAS+G L G+ KA
Sbjct:   39 DHKRRLLSAKYELKRKLYKALHRDTDLPSEIREKYLCKLSQLPRNSSFTRVRNRCIFTGRPRAVYEKFRMSRIVFRSLASQGLLNGIKKA 128          
BLAST of Ggra8041.t1 vs. uniprot
Match: A0A6N0GXL0 (Ribosomal protein S14 n=1 Tax=Zygnema circumcarinatum TaxID=35869 RepID=A0A6N0GXL0_ZYGCR)

HSP 1 Score: 78.2 bits (191), Expect = 6.870e-17
Identity = 42/90 (46.67%), Postives = 61/90 (67.78%), Query Frame = 0
Query:    4 DQVRRQLFAKKEIPRLVLKSISMSSRLPSSIRQAAQTRLSEMDRNGSAVRIRMRCVLTGRPRAVDSQTRLSRIMFRKLASEGRLPGVWKA 93
            D +RR L AK E+ R   K+I     LP+++R   + +LS++ RN S  RIR RC LTGR R+V  + R+SRI+FR+LAS+G + GV+K+
Sbjct:    8 DHMRRLLMAKYELQRTQYKAICEDRNLPNTVRYEYRVKLSQLPRNSSKTRIRNRCTLTGRSRSVYKRFRISRIVFRELASQGAICGVYKS 97          
BLAST of Ggra8041.t1 vs. uniprot
Match: A0A6G9IF38 (Ribosomal protein S14 n=1 Tax=Gonatozygon brebissonii TaxID=184482 RepID=A0A6G9IF38_9VIRI)

HSP 1 Score: 77.8 bits (190), Expect = 9.740e-17
Identity = 45/90 (50.00%), Postives = 59/90 (65.56%), Query Frame = 0
Query:    4 DQVRRQLFAKKEIPRLVLKSISMSSRLPSSIRQAAQTRLSEMDRNGSAVRIRMRCVLTGRPRAVDSQTRLSRIMFRKLASEGRLPGVWKA 93
            DQ RR  F++ E+ R++ K+IS   +L  S R     +LS+M RN S  RIR RC+LTGR RAV    RLSRI+FR+LAS G L G+ K+
Sbjct:    8 DQKRRVQFSRYELKRMLYKAISQDRKLSPSDRYEYSLKLSKMPRNSSRTRIRNRCILTGRSRAVYKMFRLSRIVFRELASRGALLGISKS 97          
BLAST of Ggra8041.t1 vs. uniprot
Match: A0A0G2YFA7 (Ribosomal protein S14 n=1 Tax=Erodium texanum TaxID=28960 RepID=A0A0G2YFA7_EROTE)

HSP 1 Score: 78.6 bits (192), Expect = 1.350e-16
Identity = 46/90 (51.11%), Postives = 60/90 (66.67%), Query Frame = 0
Query:    4 DQVRRQLFAKKEIPRLVLKSISMSSRLPSSIRQAAQTRLSEMDRNGSAVRIRMRCVLTGRPRAVDSQTRLSRIMFRKLASEGRLPGVWKA 93
            D  RR L AK E+ R + K++     LPS +R A +T+LS + RN S  RIR RC+ +GRPR V S+ R+SRI+FR+LAS G L GV KA
Sbjct:   48 DHRRRLLAAKFEMRRKLYKALCRDPSLPSDMRDAYRTKLSTLPRNSSFTRIRNRCIFSGRPRGVYSKFRMSRIVFRELASFGELLGVTKA 137          
BLAST of Ggra8041.t1 vs. uniprot
Match: A0A6J1C264 (uncharacterized protein LOC111006733 n=4 Tax=Cucurbitaceae TaxID=3650 RepID=A0A6J1C264_MOMCH)

HSP 1 Score: 77.4 bits (189), Expect = 1.460e-16
Identity = 42/91 (46.15%), Postives = 61/91 (67.03%), Query Frame = 0
Query:    3 MDQVRRQLFAKKEIPRLVLKSISMSSRLPSSIRQAAQTRLSEMDRNGSAVRIRMRCVLTGRPRAVDSQTRLSRIMFRKLASEGRLPGVWKA 93
            +D  RRQL AK E+ R + K++     LP+ +R+  + +LS++ RN S  R+R RC+ TGRPRAV    R+SRI+FR LAS+G + GV K+
Sbjct:    9 LDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPRAVYQLFRVSRIVFRDLASKGLIMGVKKS 99          
BLAST of Ggra8041.t1 vs. uniprot
Match: A0A2E3M7G1 (30S ribosomal protein S14 n=1 Tax=Rickettsiales bacterium TaxID=2026788 RepID=A0A2E3M7G1_9RICK)

HSP 1 Score: 77.0 bits (188), Expect = 1.960e-16
Identity = 40/85 (47.06%), Postives = 60/85 (70.59%), Query Frame = 0
Query:    8 RQLFAKKEIPRLVLKSISMSSRLPSSIRQAAQTRLSEMDRNGSAVRIRMRCVLTGRPRAVDSQTRLSRIMFRKLASEGRLPGVWK 92
            R+LF K E+ RL LKS++++  +PS++R  AQ  LS++ +N S  RI  RCV+TGRP++V  Q +LSRI  ++LA  G +PG+ K
Sbjct:   12 RKLFKKNELKRLYLKSLALNQNIPSNVRFKAQLDLSDLSKNSSKHRISNRCVITGRPKSVYKQFKLSRITLKELALNGDIPGLKK 96          
The following BLAST results are available for this feature:
BLAST of Ggra8041.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IPG41.840e-4483.87Ribosomal protein S14, mitochondrial n=1 Tax=Graci... [more]
A0A7C8ZGP71.180e-1850.55Uncharacterized protein n=1 Tax=Opuntia streptacan... [more]
A0A146I6031.470e-1853.33Ribosomal protein S14 n=1 Tax=Diphylleia rotans Ta... [more]
W9SCF62.100e-1748.89Ribosomal protein S14 n=1 Tax=Morus notabilis TaxI... [more]
ribosomal protein S14, mitochondrial-like n=2 Tax=Mangifera indica TaxID=29780 RepID=UPI001CFB204D3.810e-1748.89ribosomal protein S14, mitochondrial-like n=2 Tax=... [more]
A0A6N0GXL06.870e-1746.67Ribosomal protein S14 n=1 Tax=Zygnema circumcarina... [more]
A0A6G9IF389.740e-1750.00Ribosomal protein S14 n=1 Tax=Gonatozygon brebisso... [more]
A0A0G2YFA71.350e-1651.11Ribosomal protein S14 n=1 Tax=Erodium texanum TaxI... [more]
A0A6J1C2641.460e-1646.15uncharacterized protein LOC111006733 n=4 Tax=Cucur... [more]
A0A2E3M7G11.960e-1647.0630S ribosomal protein S14 n=1 Tax=Rickettsiales ba... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001209Ribosomal protein S14PFAMPF00253Ribosomal_S14coord: 42..94
e-value: 7.7E-19
score: 67.2
IPR001209Ribosomal protein S14PANTHERPTHR1983630S RIBOSOMAL PROTEIN S14coord: 4..93
NoneNo IPR availableGENE3D1.10.287.1480coord: 1..85
e-value: 9.4E-25
score: 88.8
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 4..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000261_piloncontigtig00000261_pilon:32311..32595 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8041.t1Ggra8041.t1Gracilaria gracilis GNS1m malemRNAtig00000261_pilon 32311..32595 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8041.t1 ID=Ggra8041.t1|Name=Ggra8041.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=95bp
MHMDQVRRQLFAKKEIPRLVLKSISMSSRLPSSIRQAAQTRLSEMDRNGS
AVRIRMRCVLTGRPRAVDSQTRLSRIMFRKLASEGRLPGVWKAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001209Ribosomal_S14