Ggra8040.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8040.t1
Unique NameGgra8040.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length223
Homology
BLAST of Ggra8040.t1 vs. uniprot
Match: A0A2V3ILT1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILT1_9FLOR)

HSP 1 Score: 254 bits (648), Expect = 1.120e-82
Identity = 118/192 (61.46%), Postives = 151/192 (78.65%), Query Frame = 0
Query:   32 PAPPQPH-LPYTFDTVTKYTVKELVFRPDCFDVLDESSNGVFSVKGKILDRSGEKTLFESDTEQRLLKMTENLNTFLQLMYMYDFRSKSVYTMRKKGFFPGFGRGTVYVWKGRGTDSAPFLQMNTSAGRANISIVDIESGNQLASMQRSMFGPRRLLTGADFYRVSVSAGVDVPFIIMLCVCADEQYTDFNR 222
            P  P+ H + ++FD  T Y V+E VFRPDCF+V DE++N + S+ GK++DRSG+K +F  DT+ RL KMTE  N++LQ MYM+++R+K V+T++KKG  P FGRG V VWKG+GTDS P LQMNT+ GR+ I++ DI SG   A+M+RSMFGPRRL TGAD+YRVSV  GV VPFI+MLCVCADEQYTDFNR
Sbjct:   21 PQQPEQHDVTFSFDRTTHYRVRERVFRPDCFEVHDENNNAILSIVGKVIDRSGQKVMFWKDTQHRLFKMTEEWNSWLQRMYMFEYRTKQVFTIQKKGSLPFFGRGVVLVWKGKGTDSTPCLQMNTTGGRSRITVTDIASGRVWATMKRSMFGPRRLFTGADYYRVSVRPGVHVPFIMMLCVCADEQYTDFNR 212          
BLAST of Ggra8040.t1 vs. uniprot
Match: R7QTI2 (WW domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QTI2_CHOCR)

HSP 1 Score: 77.8 bits (190), Expect = 1.400e-13
Identity = 53/183 (28.96%), Postives = 84/183 (45.90%), Query Frame = 0
Query:   41 YTFDTVTKYTVKELVFR--PDCFDVLD-ESSNGVFSVKGKILDRSGEKTLFESDTEQRLLKMTENLNTFLQLMYMYDFRS-KSVYTMRKKGFFPGFGRGTVYVWKGRGTDSAPFLQMNTSAGRANISIVDIESGNQLASMQRSMFGPRRLLTGADFYRVSVSAGVDVPFIIMLCVCADEQYTD 219
            Y +     + +KE  F    D F + + ++    F VKG        K+L +S     L KM+E L +    M + D  S ++V  +R+KGF P FG GT+  W+G     AP  ++  +  R +  +     G  +A++QR +F     L G D Y + V  G D   ++   +  DEQY D
Sbjct:   84 YVYRHAVDFKLKEKPFSLSGDDFSITNVQTGEQTFKVKGNAFSFKDSKSLLDSHGRP-LYKMSEALLSLRGRMKIVDPSSGRTVINLRRKGFIPHFGTGTIQAWQGDEEAGAPLYEVKGNLVRKDFVVRS--GGRTVATVQRKLFTASNFLLGKDTYVIRVQPGNDAALLVFFVIAIDEQYRD 263          
BLAST of Ggra8040.t1 vs. uniprot
Match: A0A0L0FBJ0 (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FBJ0_9EUKA)

HSP 1 Score: 68.2 bits (165), Expect = 1.650e-10
Identity = 46/152 (30.26%), Postives = 74/152 (48.68%), Query Frame = 0
Query:   72 FSVKGKILDRSGEKTLFESDTEQRLLKMTENLNTFLQLMYMYDFRSKSVYTMRKKGFFPGFGRGTVYVWKGRGT-DSAPFLQMNTSAGRANISIVDIESGNQLASMQRSMFGPRRLLTGADFYRVSVSAGVDVPFIIMLCVCADEQYTDFNR 222
            F +KGK L  S +K + +++    +  + E L +  +  Y+       V  ++ K FF       V   KG G  DS P  +++ S    N  IVDI +GN +A+++R +      L G+D Y VSV  G D  F++ + V  DE ++D  R
Sbjct:   48 FKIKGKKLSLSEKKRVLDNEGNT-IAMINEKLFSIHRRQYICRADETKVAEVKAKSFFQFKSNAEVTFLKGAGVEDSDPDYKISGSYLNRNYDIVDISTGNVMATVRRDIVNMANFLFGSDTYAVSVMPGFDSAFVVCIVVTLDEIFSDRAR 198          
The following BLAST results are available for this feature:
BLAST of Ggra8040.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3ILT11.120e-8261.46Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QTI21.400e-1328.96WW domain-containing protein n=1 Tax=Chondrus cris... [more]
A0A0L0FBJ01.650e-1030.26Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038595LURP-one-related superfamilyGENE3D2.40.160.200coord: 39..220
e-value: 1.5E-20
score: 75.6
IPR007612LURP-one-relatedPFAMPF04525LORcoord: 50..212
e-value: 7.8E-10
score: 38.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36
IPR025659Tubby-like, C-terminalSUPERFAMILY54518Tubby C-terminal domain-likecoord: 41..216

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000261_piloncontigtig00000261_pilon:31048..31716 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8040.t1Ggra8040.t1Gracilaria gracilis GNS1m malemRNAtig00000261_pilon 31048..31716 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8040.t1 ID=Ggra8040.t1|Name=Ggra8040.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=223bp
MSNNGAQHASSTSDEEEHPIEPILHDAHLTSPAPPQPHLPYTFDTVTKYT
VKELVFRPDCFDVLDESSNGVFSVKGKILDRSGEKTLFESDTEQRLLKMT
ENLNTFLQLMYMYDFRSKSVYTMRKKGFFPGFGRGTVYVWKGRGTDSAPF
LQMNTSAGRANISIVDIESGNQLASMQRSMFGPRRLLTGADFYRVSVSAG
VDVPFIIMLCVCADEQYTDFNR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038595LOR_sf
IPR007612LOR
IPR025659Tubby-like_C