Ggra8037.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8037.t1
Unique NameGgra8037.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length430
Homology
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BLAST of Ggra8037.t1 vs. uniprot
Match: A0A2V3ILQ4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILQ4_9FLOR)

HSP 1 Score: 423 bits (1087), Expect = 8.770e-143
Identity = 234/430 (54.42%), Postives = 309/430 (71.86%), Query Frame = 0 
Query:    1 MFVVSVLTALFLAVTPLVLAQLVLESGSQQSLLQYGSAQAAQSFLLSVPAGETVTAVTLSTEQSDVLTSHDVLFSQISQTLYNVSINLFFDGQPGQVQYSVQATSQSTDGTQSRSQLSATHSVYGVVFYEMVDGERKVVSGDESDGIQFNSFTTPGSSPRVFRANAHTPPGVSLNGKPFIRSARGTGQNPLLLESAVEVSGDDISLSVTPYRTGSVIVTLEFADLEINGETFETVVRVTVPDVPSPPVVISQKGELVADIFPNGTAEFKLDMFNAADFPAMEALVGDVMFEASREGSEFMEFDQRVRFVGSI-DEGTFPLNVQVRRGGEALDAVIPDDVSLEFVRAAAVDKVIGGGTAIGATSNVGLIVGLSVLGLVLLVAMVGGVFALFWSRRRSEQAEALAEEPYMEAEDVGGFEIARDVYGRGSVAV 429
            MFVVSV T L L +    +AQL L+SGS +SLLQYGSAQ+ +++LL+V   +TVT V+LST+   VLTSH+V FSQ+SQ LYN+S+NLFFDG PG+VQY + A ++++DG++ R +LSA+HSV+GVVFYE V GER++VSGD+SDGI + SFTTP S  R F A +HTP GV L GK  IR+  G+G +PLLLES ++VSGD +S+ V PYRTG+VIVT+EF +L+++GE+ ETVV ++VP+ P PPVV++QKGE V  I  NGTAE  ++MFNA  FP MEA++G    EA R+GS+  + +Q VRFVGS+ +EGTFPL ++V++    +DAV+  + S+   +A   ++VIGG    G  SN                  VGGV  +FWSRRRSE+AEA  +  Y  AEDVGGF IARDVYGRGSV V
Sbjct:    1 MFVVSVFTFLVLVLHSFAVAQLALQSGSHESLLQYGSAQSVKTYLLNVSPEQTVTEVSLSTQDGKVLTSHEVSFSQVSQGLYNISVNLFFDGIPGEVQYRITAQTRASDGSEHREELSASHSVFGVVFYEEVQGERRLVSGDDSDGIHYTSFTTPESPARTFSAISHTPAGVILEGKSSIRAQTGSGASPLLLESDIDVSGDGMSVDVHPYRTGAVIVTVEFPELQVDGESHETVVYISVPNTPLPPVVVTQKGEKVVQIATNGTAELTVEMFNAESFPTMEAVLGSNKLEAIRDGSDIADLNQNVRFVGSVREEGTFPLRIRVKQE-VIVDAVMLYEPSVALTKAGT-NQVIGGSPVAGIASNXXXXXXXXXXXXXXXXXXVGGVMTVFWSRRRSEEAEANFDAAYSPAEDVGGFGIARDVYGRGSVEV 428
The following BLAST results are available for this feature:
BLAST of Ggra8037.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ILQ48.770e-14354.42Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 391..429
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 366..390
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..365
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availableTMHMMTMhelixcoord: 367..389
NoneNo IPR availableTMHMMTMhelixcoord: 2..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000261_piloncontigtig00000261_pilon:21406..22695 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8037.t1Ggra8037.t1Gracilaria gracilis GNS1m malemRNAtig00000261_pilon 21406..22695 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8037.t1 ID=Ggra8037.t1|Name=Ggra8037.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=430bp
MFVVSVLTALFLAVTPLVLAQLVLESGSQQSLLQYGSAQAAQSFLLSVPA
GETVTAVTLSTEQSDVLTSHDVLFSQISQTLYNVSINLFFDGQPGQVQYS
VQATSQSTDGTQSRSQLSATHSVYGVVFYEMVDGERKVVSGDESDGIQFN
SFTTPGSSPRVFRANAHTPPGVSLNGKPFIRSARGTGQNPLLLESAVEVS
GDDISLSVTPYRTGSVIVTLEFADLEINGETFETVVRVTVPDVPSPPVVI
SQKGELVADIFPNGTAEFKLDMFNAADFPAMEALVGDVMFEASREGSEFM
EFDQRVRFVGSIDEGTFPLNVQVRRGGEALDAVIPDDVSLEFVRAAAVDK
VIGGGTAIGATSNVGLIVGLSVLGLVLLVAMVGGVFALFWSRRRSEQAEA
LAEEPYMEAEDVGGFEIARDVYGRGSVAV*
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